Nostoc linckia: NIES25_27530
Help
Entry
NIES25_27530 CDS
T10227
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
nlk Nostoc linckia
Pathway
nlk02010
ABC transporters
nlk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES25_27530
03070 Bacterial secretion system
NIES25_27530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlk02000
]
NIES25_27530
02044 Secretion system [BR:
nlk02044
]
NIES25_27530
Transporters [BR:
nlk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES25_27530
Secretion system [BR:
nlk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES25_27530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
SMC_N
AAA_22
Peptidase_C39_2
DUF3335
AAA_29
NB-ARC
nSTAND3
AAA_16
RsgA_GTPase
IstB_IS21
Gtr1_RagA
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
BAY76304
LinkDB
All DBs
Position
complement(3263150..3266203)
Genome browser
AA seq
1017 aa
AA seq
DB search
MSSAFSRQYLAEQLTRSLGESLSDEELQKCIGVLEIIEPPVAKQFWEATTAAPGIYIILS
GKVRLLDSSNNLITTLFSGASFGELTLFPEHKFSPYVARASVNLKLCYIKGEILEEVILT
SASIGDRLLKRAETWDLLLLCCRNSLINLNGTVEEIFKALSLFHRHVLESDSLMTNLIKD
KHLWLLHRGEIQDSSGRILTPGNIYLNPKHESWQVTQPTIAYSLSNADWQIALQHWPQLA
ELIHFQERQVEVGTGEGFSQLPIPSPQYPIPKVEPKPKQNKQRPYFPSPTVRAGHFLGRL
TKRYPFFEQQSASDCGASCLVMISRYWGKRFNVNRIRDLTNISRSGASMRGLTAAAESIG
FASRPVKASLDKLAQQPLPAIAHWEGRHYVVVYEINKKQVIVGDPAIGQRNLTHSEFKTG
WTGYALLLQPTDLLRETDEAVTPFWQFFDLVKPHSQVLIEVFIASVLIQLLGLVTPLFTQ
LLLDRVIVQGSTLTLNAVGLGLLIFSVFRVAIAGLRQYLLDHTANRLGLALLVGFIKHTF
RLPLAFFESRYVGDIVSRVQENQKIQRFLTGEALSIGLDLLTVFIYVGLMFSYSWQLALL
CLAIVPPFVLLALIATPFLRRISREVFNASANENSYLIQSLTGIRSVRSMAIEQTVRWRW
EELLNNVIKKTFSGQIISNQLQVFSSGIEAIVTTGLLWFGAWQVIQNQLTIGQLVAFNML
LGNIIRPFQRLVVLWNQLQEVIISTERINDVLEAEPEEDLQYQTRQTLSNLRGNVIFDNV
TFRYHPESDINVLENLSFEIKPEQTVAVVGRSGSGKTTLSKLILGLYPPTDGKVLVDAQD
VTNISLRSLRSQIGVVDQDTFLFGGTIRENISIAHPEASQEEIVEAARLAGADEFIQQMP
MGYETQIGESGGMLSGGQRQRLAIARALLGNPSFLVLDEATSHLDAESERIIQNNLKKIL
QGRTSLIIAHRLSTVRHADQILVLDRGILVESGTHEELIGKKGHYFYLNQQQLAQKA
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagcgttttctcggcaatacttagccgaacaactcactcgcagcttaggtgag
tcgctgtcagatgaagaacttcagaaatgtatcggagtgctggaaattatcgaaccgcca
gtagcaaaacaattttgggaagcaactacagcagcgccaggaatttatatcattttgagt
ggtaaagttaggctgttggatagctctaataacttaattactacccttttttctggcgca
tcatttggcgagttgactttatttccagaacataaattcagcccttatgttgctagagct
tcggttaatttaaagctttgctatatcaaaggagaaattttagaagaagtaattttgaca
tcggctagcattggcgatcgccttttaaaacgtgcagaaacttgggatttacttctttta
tgttgccgcaattctttaattaatttaaatggaactgtggaggagatatttaaagcatta
tctctatttcatcgtcacgttttagaaagcgattctctgatgactaatctcatcaaagat
aaacacctgtggctactccatcgcggagaaatacaagactctagcgggcggatattaaca
cctggaaacatctacctaaatccaaaacatgaaagttggcaggtaactcaaccaaccatc
gcttatagtttgagcaatgccgattggcaaatagcactacaacattggccgcaattagca
gaattaatacattttcaagaacgtcaagttgaagtggggactggggaaggtttttcccaa
ttaccaatacctagtccccaatacccaatccccaaagttgagccgaaaccaaagcaaaat
aaacaacgaccctactttcctagtccaacggtgagggctgggcattttttgggacgtttg
actaaacgatatccgttctttgaacaacaaagcgcttcagactgtggtgcatcttgcttg
gtaatgattagccgctattggggtaaacgctttaatgttaaccgcatacgggatttaact
aacatcagccgcagtggtgcatcaatgcgaggtttgacagccgccgcagaaagtatcggc
tttgctagccgtccggtaaaagctagcttagataaattagcacaacaacccctaccagcg
atcgctcactgggaaggtagacattatgttgttgtctatgaaattaataaaaagcaggtg
attgttggcgatcccgccatcggtcaacgtaacctgactcacagcgaatttaaaaccggt
tggactggttatgctttgttattacaacccacagatttacttcgagaaactgacgaagca
gttacaccattttggcagttttttgatttagtaaaaccccactcccaagtattgatagaa
gtgtttatcgcttcggtattaattcaattgctgggacttgtgacacccttatttacgcag
ttacttttagaccgagtgattgtccaaggtagcaccttaactttaaatgccgttggttta
ggattactaatttttagtgtttttcgcgttgcgatcgctggactgcggcaatatctatta
gatcacacagcaaatcgcttggggttagcactattagtaggttttataaaacatactttt
cgcttgcccttagctttttttgagtcgcgttatgttggggatattgtctctcgcgtccaa
gaaaatcaaaaaatacagagatttttaactggagaagcactttctattggcttggattta
ttaacagtatttatctatgtgggattgatgttttcgtacagttggcaattggcattatta
tgcttggcaattgtgccaccatttgtattattggcgctcatagctacacctttcttgcgc
cgcatcagtcgcgaggtttttaatgcctcagccaacgaaaatagttatttaatccaatct
ctcactggtattcggtcagttcgctctatggcaattgagcaaacagtacgctggcgttgg
gaagaactgctaaataatgtcattaaaaagacttttagcggacagataattagtaatcag
ctacaagtttttagttccgggatcgaagccatagtaaccactgggttactttggtttggt
gcgtggcaagtaattcaaaaccaactcaccatcggacaattagtggcttttaatatgttg
ttaggcaacattattagaccttttcaaaggcttgttgtgctgtggaaccagttacaagaa
gtgattatttctacagaacgaattaatgatgtcttggaagcagaaccagaggaagattta
caatatcaaacccggcagacattaagtaatttacgcggtaatgtaatctttgacaacgta
acttttcgctatcatccagaaagcgatatcaacgtattagaaaatctcagttttgaaatc
aaacccgaacaaactgtggcagtcgtagggcgtagtggttctggtaaaacaactctctca
aaattgattttgggactatatccaccgacagatggtaaagtgttggttgacgctcaagat
gtaactaatatttccctgcgatcgctgcgttctcaaattggtgttgttgaccaagataca
tttttattcggcggtacaatccgcgaaaacattagcattgctcatccagaagcctcacaa
gaagaaatagttgaagcagcacgtttagcaggagcagatgaatttattcagcaaatgcca
atgggttacgaaactcaaattggcgaaagtggtggtatgttatctggcggacaacgccaa
cgtttagcgatcgctcgtgctttgctaggaaatccctctttcttagtattagatgaagca
acgagtcatctagatgctgaatctgagcggattattcagaacaacctcaaaaaaattctt
caagggcgcacaagtttaattattgctcatcgactttctaccgtgcgtcatgccgaccag
attttagttttagacaggggaattctagttgaaagcggtactcacgaggaattaatcggc
aaaaaaggtcattatttctatctcaatcagcaacaattggcgcaaaaagcttga
DBGET
integrated database retrieval system
