Nostoc linckia: NIES25_30060
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Entry
NIES25_30060 CDS
T10227
Name
(GenBank) SNF2-related helicase
Organism
nlk Nostoc linckia
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
DEAD_2
ERCC3_RAD25_C
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
BAY76554
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Position
complement(3544759..3548067)
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AA seq
1102 aa
AA seq
DB search
MAILHGNWLLKNQNGSLFIWGETWRSPRVNLASNESEEIPLHPLAMTSVELSEWLRSQNM
PIANFIQQPQVATTNRARKATSTTEIALPTHSQIIALPTYIPENTDKETPGIFPVHSASF
EIEADSPQYLHPWRVEGFCLTPAQAVKFLAAVPLNATKGEDTFLGTDLRFWSQVARWSLD
LISRCKFLPTIKRQSDGSTLAKWQVLLDSAVDGTRLEKFSAKMPLVCRTYQEGMEGWGDG
GTRGQGDKGTRGQENILNSSLLTPHSSLPIYIDFPTEPQELLLGFLNSTIDAQIREMVGF
QSVMEAKAMASLPAAVREWLPALTSASGTVNAEAIEVERLEGALKAWTMPLQYQLTLKTL
FRTCFQLRSPESGETDWTLAYFLQAADNPEFLVDAATIWHNPVERLVYERTIDQPQETFL
RGLGLASRLYPVLAPSLETEYPQSFRLNPIQAYEFIKSVAWRFEDSGLGVILPPSLTNRE
GWANRLGLKITAETPKTKQGRLGLQSLLNFQWQLAIGGQNISKAEFDKLVALNSPLVEIN
GEWVELRPQDIKTAQTFFASRKDQMALSLEDALRLSTGDTQVIEKLPVVSFEASGALQEL
IGALTNNQAIEPLPAPASFQGELRPYQERGAAWLSFLERWGLGACLADDMGLGKTIQFIA
FLLHLKEQDALENPTLLVCPTSVLGNWEREVKKFAPSLKVLQYHGDKRPKGKAFVEAVKK
HDLVITSYSLIHRDIKSLETVNWQIIVLDEAQNVKNYEAKQSKAVRQLAATFRIALTGTP
VENRLQELWSILDFLNPGYLGNRQFFQRRFAMPIEKYGDTASLSQLRSLVQPFILRRLKS
DREIIQDLPEKQEMTVFCGLTADQAALYQKVVEASLAEIESAEGLQRRGMILALLIKLKQ
ICNHPAQYLKQATLGQHHSAKLLRLEEMLEELLAEEDRALIFTQFAEWGKLLKPHLEKQL
GREIFFLYGSTNKKQREEMIDRFQHDPQGPPIMILSLKAGGVGLNLTRANHVFHFDRWWN
PAVENQATDRVFRIGQTRNVQVHKFVCTGTLEEKIHDMIESKKQLAEQVVGAGEEWLTEL
DTDQLRNLLILDRNAVIDEDES
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggcgattttacacggaaactggttactaaaaaatcaaaatggtagtttatttatttgg
ggagaaacttggcgatcgccgcgagtaaatttggcgtcgaatgaatctgaagaaatacca
ttacatccactggcaatgacatcggttgagttaagcgagtggttgcgttcccaaaatatg
ccgattgccaactttatccagcaaccccaagtagctacaactaatcgggcacgcaaagca
actagtaccactgagattgctttaccaacccactcccaaattattgccctaccaacttac
ataccagaaaacactgataaagaaacaccagggattttccccgttcattctgctagtttc
gagatagaagcagactcaccacaatatttacatccgtggcgagttgaaggtttttgtctc
acccccgcccaagcagtaaaatttctggctgctgttcccctaaatgctactaaaggggaa
gatacttttttgggtacagatttacgcttttggtcgcaggttgcccgttggagtctcgat
ttaatttctcggtgtaagtttttaccaactatcaaacggcaatccgatggttctacactt
gctaagtggcaagtacttttagacagtgctgtagacggcacccgcctagaaaaattttct
gccaagatgcccttggtttgtcgcacctatcaggaagggatggagggatggggagatggg
gggacaaggggacaaggggacaaggggacaaggggacaagagaatattcttaactcctca
ctcctcactcctcactcctcactcccaatatatatagactttcctacagaacctcaagaa
ttgttactgggatttctcaatagtacgatagatgcccaaatacgagagatggtgggtttc
caatcggtgatggaagccaaggcaatggcatctttaccagctgcggtgcgagagtggttg
ccagctttaactagtgcatctggtacagtcaatgcagaagccattgaagtggaacgacta
gaaggggcacttaaagcctggactatgccgctacaatatcagctaactttgaaaactctg
tttcgtacttgttttcaactgcgttctccggagtctggcgaaacagattggacattggcg
tattttctgcaagcggcagacaatccagagtttttggtggatgcggcaacaatttggcac
aatccagttgaacgattggtgtatgaacgcacaattgaccaaccccaagaaacattcttg
cggggtttggggttagcttcccgattgtatccagtccttgcaccgagtttagaaacagaa
tatccccaatcttttcgtcttaaccccatccaagcatacgagtttatcaagtccgtggct
tggagatttgaagatagcggtttgggagtgattttacctcctagtttgacgaaccgtgaa
ggatgggcgaaccgtttgggtttgaaaattacagccgaaactccaaagacaaaacaagga
cgtttggggttgcaaagtctattgaatttccaatggcaattggcaattggcggacagaat
atttctaaagctgaatttgataaacttgtggctttaaatagccccttggtagaaattaat
ggcgagtgggtggaattgcgaccccaagacattaagacagcccaaacctttttcgcttcc
cggaaagaccaaatggcgctgtctttagaagatgctttgcgtttgagtacaggggatacc
caggtaatcgaaaaattaccagtggttagctttgaggcgtctggggcattacaagagttg
attggggccttaaccaataatcaagccattgaacctttgcccgcgccagccagctttcaa
ggagagttgcgaccttatcaagaacgcggtgctgcttggctgtccttcttagaacgttgg
ggcttgggtgcatgtctagcggacgatatgggacttgggaaaacgattcagttcattgct
tttcttctacatctcaaagaacaagatgcactagaaaatccaactttactagtttgccca
acttccgttttaggcaactgggaaagggaagttaagaaatttgcaccaagtctgaaagtt
ttgcaatatcacggtgataaacgtcctaaaggaaaggcgtttgtagaagcagttaaaaag
cacgatctagtcatcactagttactcactgattcatcgtgatattaaatcattagagact
gtgaattggcagataattgttttagatgaagcccaaaatgtgaaaaattacgaggcgaag
caatcaaaagcagtgcggcaattagcagcgacatttcggattgcgttgacggggacacca
gtagaaaatagactgcaagaattgtggtctattttggattttctcaatcccggatatttg
ggcaatcggcaatttttccagaggcgatttgcgatgcctattgaaaagtatggggatacg
gcttctttgagtcaattacgttcgttggttcaaccatttatactgcggcgattaaaaagc
gatcgcgaaattattcaagacttgccagagaagcaagaaatgacagtcttttgtggttta
actgccgaccaagccgcactttatcaaaaagtagtagaagcatctttagcagaaattgaa
tctgctgaaggtttgcaacgtcgagggatgattttggctttattaatcaaactcaaacaa
atctgcaatcacccggcgcaatatttgaaacaagccacattaggacaacatcattcagcc
aaactgctgcggctagaagaaatgttagaagaacttttggcagaagaggatcgcgcttta
atcttcacccaatttgctgagtggggtaagttacttaaacctcatttagaaaaacagtta
ggacgagaaatattctttttatatggcagtaccaataaaaaacaacgcgaggaaatgata
gaccgtttccaacacgatccccaagggccgccgattatgattctttctctaaaagcaggt
ggtgtaggattgaatttaacacgagcaaatcatgtattccattttgatagatggtggaat
ccagccgtagaaaaccaagctacagaccgagtatttcgcattggtcaaacccgcaatgtg
caagtacataaatttgtctgcactggcactttagaagagaaaattcacgacatgattgaa
agtaaaaaacaactagccgaacaagttgtaggtgcaggcgaagaatggttgactgaacta
gatacagaccaacttcgtaacttactaatcctcgatcgcaatgcagtcattgacgaagat
gaaagttaa
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