Nostoc linckia: NIES25_34170
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Entry
NIES25_34170 CDS
T10227
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
nlk Nostoc linckia
Pathway
nlk02010
ABC transporters
nlk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES25_34170
03070 Bacterial secretion system
NIES25_34170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlk02000
]
NIES25_34170
02044 Secretion system [BR:
nlk02044
]
NIES25_34170
Transporters [BR:
nlk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES25_34170
Secretion system [BR:
nlk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES25_34170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
SMC_N
Peptidase_C39_2
AAA_22
Peptidase_C70
NB-ARC
Mg_chelatase
AAA_29
DUF3335
AGTRAP
Regnase_1_C
Gtr1_RagA
RsgA_GTPase
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BAY76959
LinkDB
All DBs
Position
complement(4073972..4076671)
Genome browser
AA seq
899 aa
AA seq
DB search
MVSLQQLNNILGHSLSKEEFEGYLPQFKESNPKVGKFWQGTYVEPGVYIAIAGKVRLLDS
ADELIATLEPGDSFGEFTLFPDTQFQPYAARASVNLQLCFIPGEVLRSLMAKYPQIREHL
WARALSRNPEQVELGNAVNIETNTHSETDIFSQPAELPQGKKISKAYFPNPTQQVGHLWQ
RVTRRYPFFAQQSGSDCGAACLVMVSRYWGKRFSVNRLRDIANVDRNGASLRGLLVAAES
LGFATRPVKAGLKQLAKQSLPAIVHWEGKHYIVVYEVTAKHVIVADPAIGQRTLTHAEFK
ASWTGYTLLLQPTATLKETQESSTPFWQFFELMKPHSLVMLEVFVASIFIQIFGLITPLF
TQLILDRVVVQRSELTLTAVGIGLLMFNLFRVAMTGLRQYLLDHTANRIDLALIVGFIRH
TLRLPLSFFESRYVGDIISRVQENRKIQRFLSGEALSILLDLLTVFIYVGLMFWYSWKMA
LLSLLIIPPFALLALVATPFLQKISREIFNAIAKESSYLIEALTGVRTVKATAVEQTVRW
HWEELLNKEVKTNFSGQVINNRLQIFSNTIQALMTTGLLWFGAYQVIHNQLTIGQLVAFN
MLLGNIITPFQRLTVLWNQFQEVVIAMERINDVLDAEPEEDLHHQPRQNLPKIKGNIRFD
KVTFRYHSDSDINILENLSFEIQPGQMVALVGRSGSGKTTISKLVLGLYPPTDGKILIDG
QDITSISLSSLRQQVGVVDQDTFLFGGTIRENISLGHPGSSLEEVIQAAKLAGADEFIKK
LPMGYETQIGEGGGLLSGGQRQRIAIARALLGNPQLLVLDEATSHLDTESERIIQQNFNT
ILRGRTTLVIAHRLSTIRNADLILVLDRGVLIESGNHEELMAKRGHYFYLNQQQLQVAA
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
ttggtttctctgcaacaactcaacaatattctgggacattctctctctaaagaagaattt
gaaggatatctgccacaatttaaagaaagcaacccgaaagtcggtaaattttggcaagga
acttatgttgaaccaggtgtatatattgcgatcgctggcaaagtaagattgctcgatagc
gccgacgaattaatcgccactttagagccgggagactcattcggcgaatttactttattc
ccagatacgcaatttcagccttatgcagccagagcctcagtaaatttacaactctgtttt
attccgggtgaggtgctgcgatcgttgatggctaagtatcctcaaattcgcgagcattta
tgggcgagggcattatctcgcaatcccgaacaggtggaattaggcaatgctgtcaacatt
gagacaaatacgcattctgaaacagatattttctcacaaccagcagaactaccgcaggga
aagaaaattagcaaagcctattttcccaatcccactcaacaagtcgggcatttatggcag
cgagtcacgcggcgctatccgttttttgcccaacagagtggatctgactgcggtgcagct
tgtttggtgatggtatctcgatattgggggaaacgttttagcgtcaatcgcttgcgagat
atcgccaatgtcgatcgcaatggcgcatctttgcgcgggttattagtagcggccgaaagc
ttgggctttgccacacgaccggtaaaagctggtttgaagcaattagccaagcaaagctta
ccagccattgttcactgggaaggcaagcattacattgttgtctacgaagttaccgccaaa
catgtgattgtagccgatccagcgatcggtcaacgcacccttactcacgccgaatttaaa
gccagctggacgggttacacattgctgctgcaaccgacagccacgctcaaagaaactcag
gagagttctacgcctttttggcagttctttgagttgatgaaacctcattctttggtgatg
ctggaggtatttgttgcctcaatatttatccagatatttgggctgattactcccttattc
acccagttaattttagaccgcgtagtggtgcagcgatcggaactcaccttgaccgctgtg
ggcatagggttgttgatgtttaacctgtttcgggtagcaatgacagggttgcgccaatat
ctcctagaccacacagccaatcgtatagacttagcattaattgttgggtttattcgccat
accctacggctgcctttgagtttcttcgagtcccgttacgtgggagatattatctctcgc
gtccaagaaaatcgcaaaattcaacgctttctttctggtgaagcattatcaattctgcta
gatttactcaccgtctttatctatgtgggattaatgttttggtacagttggaaaatggcg
ttgctttcattgttaattatcccgccttttgctttactggccttagtcgccacacctttt
ttacaaaaaatttcacgagaaatatttaatgctattgccaaagaaagtagttatctaatt
gaagctttaaccggtgttaggacagtcaaagcaacggctgtagaacaaacagtacgttgg
cattgggaggagttattaaataaagaagtaaaaactaatttttctggacaagttattaat
aatcgtttgcaaattttcagtaacacaattcaagcactgatgaccacaggtttgctgtgg
tttggggcgtaccaagtaattcacaaccaattaactattgggcaactagtggcatttaat
atgctattgggcaatattattacaccctttcaacgcttaactgttttatggaatcagttc
caggaagtcgtgatagcgatggaacgtattaatgatgtattggatgcagaacccgaagaa
gatttacatcatcagccacgacaaaatttaccaaaaattaaaggcaatattcgctttgat
aaagtgacatttcgctatcattcagatagcgatatcaatattttagagaatctcagcttt
gaaattcaaccagggcaaatggtagcgctcgtaggacgtagcggttctggaaaaactacg
atttctaaattggttttaggattgtatccgccaacagacggcaaaattttaattgatgga
caagatattaccagtatttccttaagttccttgcgtcagcaagttggagtagttgaccaa
gatacctttttgtttggcggcacaattcgagaaaatattagcttaggacatcctgggtcg
agtttagaagaggtaatccaggcagcaaaactagcgggtgctgacgaatttattaaaaag
ttaccaatgggatatgaaacccaaattggcgaaggtggcggattattatctggcggacaa
agacaaagaatcgctattgccagggctttattaggtaatcctcagttgttagttttggat
gaagcaacttctcatttagataccgaatcagagagaattatccagcaaaactttaataca
attcttagaggaagaaccactttagtaattgcccatcgtctttctacaatccgcaatgcc
gatttaattttagtattagaccgcggtgtcttaattgagagcggaaatcatgaagaatta
atggctaaacgcggacattatttctatctcaatcaacagcaattacaggtggcagcataa
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