Nostoc linckia: NIES25_34400
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Entry
NIES25_34400 CDS
T10227
Name
(GenBank) ABC transporter-related protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
nlk Nostoc linckia
Pathway
nlk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES25_34400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlk02000
]
NIES25_34400
Enzymes [BR:
nlk01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NIES25_34400
Transporters [BR:
nlk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES25_34400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
Zeta_toxin
AAA_29
AAA_15
ABC_ATPase
RsgA_GTPase
AAA_30
nSTAND3
AAA_25
AAA_16
DUF3584
AAA_14
AAA_23
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
BAY76982
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Position
complement(4104702..4106543)
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AA seq
613 aa
AA seq
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MLLKLPQTISNLLKATNFWQDNYLILREVANFRKIAISALVFSILAAAFEGVSIGFLLSF
LQSLTSPNAQPVQTGIDFFDVWILGTKTSAINRLYRISLLILLSTWLRATFNYFSQVYTE
LSQLHLADRLRKQIFEQLQALSLSYFAKTRAGELINTITTEIDRIRQGFSAAAFLFTRGI
TTFVYLISMFAISWQLTLISALLFTLLGVGLSNLNARVRESSFGVTNANSNFTSTAVEFI
NGIRTVHSYGTQEFERQRYYKASDKVVSTTTKVVFTWTLVKPIAEGVATTVLVGMIILAF
TSLVSNGTLQVASLLTFFFVLFRFIPFVQDINGTRAFLSTLHGSANNIKNLLKTDDKNYF
QNGHIKFKGLKTSINLVGVDFGYDDENLVLHNITLTIEKGKMTALVGASGAGKTTLADLI
PRFYNATEGNVYIDETDIRLFEINSLRSQIAVVSQDTFIFNTSVWQNIAYGTPEATNEQI
QEAAKLANALEFILEMPQGFNTQLGDRGVRLSGGQRQRIAIARALLRNPEILILDEATSA
LDSLSERLIQDSLEKLSVGRTVIAIAHRLSTISKADKVVVLEAGRIVEQGKYEELLGRQG
KLWEYHQMQYYNS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgaaacttcctcaaacaatcagcaatctgctcaaagctactaacttttggcag
gacaattatttgatattacgagaagttgcaaacttccgcaaaattgcaatttccgctttg
gtattttcaattttggcagcagcatttgaaggtgtgagtattggcttcttactttcattt
ttgcaaagcttaactagtcctaacgctcaacctgttcaaacaggaatagatttctttgat
gtttggattttgggaactaagacatcagccattaatcgactctatcgtatatctctatta
attttgttgagtacttggttgcgtgctacctttaattacttttcccaagtctacacagaa
ttatctcaattacatcttgcagatcgcttacgcaagcaaatctttgagcagttacaagct
ttatccctaagctactttgccaaaactcgtgctggagaattaattaacacaattaccaca
gaaattgacagaattagacaaggttttagcgccgcagctttcttatttactaggggaata
acaacttttgtttacttaatctcaatgtttgcgatctcatggcaactaactttgatttca
gcattactatttacacttttaggtgtaggcttatcgaatttaaatgccagagtcagagaa
tcaagttttggcgtcacaaatgctaattctaattttacatcaacagccgtagaatttatt
aatggtattcgcactgttcactcctatggcactcaagaatttgagcgccaacgttactat
aaagctagcgataaagtagtaagtactacaactaaagttgtcttcacttggacacttgtt
aaaccaattgccgaaggagtagctactacggtattggtgggaatgattattttggcattc
actagcctggttagtaatggaacgctacaagtagcttctttactaacatttttctttgtg
ctatttcgttttatcccatttgttcaagatattaatgggacgagagcatttctcagtact
ttacatggctccgcaaacaacatcaaaaatcttctgaaaactgatgacaaaaattatttt
cagaatgggcatattaaatttaaagggttaaaaacttcaattaatttagtaggtgtagat
tttggttacgacgatgaaaatctagtactgcataatattaccctaaccatcgaaaaggga
aaaatgacagcattagtcggagcttctggggctgggaaaacaacccttgctgatttaatt
ccccgattttataatgctacagaggggaatgtttacatcgatgaaactgatatacgactg
tttgaaattaattctctacgttcccaaatagcagttgttagtcaggatacttttattttc
aatactagtgtttggcaaaacattgcttatggaactccagaagctaccaacgagcaaatt
caagaagctgctaaattagcgaatgcactagaatttattttagaaatgcctcaaggtttt
aatacccaattaggagataggggtgttagattatctggaggacaaagacagcgaattgct
attgcgcgggcgttactacggaacccagaaattttgattttggatgaagcaaccagcgcc
ttagattctctatcagaacgcttgattcaagactcattagaaaagctatctgttggcaga
acagtaattgcgatcgctcaccgtctttctactatttctaaagccgataaagtcgtggtt
ttggaagcaggaagaatagtagaacaaggcaaatatgaagaattgctcggacgccaaggc
aagctttgggaatatcaccagatgcaatactataattcctaa
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