Nostoc linckia: NIES25_38720
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Entry
NIES25_38720 CDS
T10227
Name
(GenBank) TPR repeat-containing protein
Organism
nlk Nostoc linckia
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
TPR_NPHP3
TPR_7
TPR_1
TPR_2
TPR_8
TPR_14
TPR_16
TPR_MalT
TPR_19
TPR_17
MIT
TPR_5
CFAP70_TPR_C
CFAP70_mid_TPR
SHPRH_helical-1st
ARM_TT21_C
Motif
Other DBs
NCBI-ProteinID:
BAY77410
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Position
4642131..4644017
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AA seq
628 aa
AA seq
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MQWANFLAKEAATTGLSLEQTVAFVNYFKTENLGKTEAQLARELNVDIPTFRKWMGELYD
KFAQNYPELAISKSQSKLEKLQAYLSAKYNSELDVLKPLAAIKLLKSLVVQERLQQEPWV
ARRICKFLGYSPLALELVGRYLNKIPDLSLEILLKRLEKKREEHEAVANANSLMHYEYGV
AEAFELSWEQLDENAQSFGCFLSLCALADIPLSVETIEDEKKQQLNEKAIADLLELHLLQ
HKSKVIYLLNPLIRQLLRIKLDNSKEADEAKTKFAAMMLEVAKLIPQQLNPEDIVNFTPH
IPHITEVATHLSQYLSDENLIALFTKLASFYQGQGLYQQAESWLQRSVKLTQNHLGLEHS
YIAASLNNLAGLYESTGRYSEAEPLYRQALELRKRLLGDNHLDVATSLNNLALLYESTGR
YNEARPLFEQALKLRKHLLGEEHPDIATNLSYLAVVYESIGRYGKAESLYQQALELWKRL
VGEEHPHVATSLNNLGALYCFTGRYSEAEPLLKQALKLRKRLLGEEHTDVATSLNNLGQL
YESTGRYSEAEPFYKQALELTKRLLGENHPDVAISLNNLAALYRHTRRYRKAKPLFEQAL
KICERTLGVSHPTTMTVRANYASFLRET
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgggctaattttctagccaaagaagctgctactactgggttatctctggaacaa
acggtagcttttgtaaactattttaagactgaaaacttaggtaaaactgaagctcaactt
gccagggaattaaacgttgatatccctactttcagaaaatggatgggcgagctatatgac
aaatttgcccagaattatcctgaattagctatttctaaaagtcagagcaaactagaaaag
ttacaagcttacctaagcgcaaaatataatagcgaattggatgtcctcaaaccattagcg
gcgataaaactattaaaatcgctagtggttcaagaaaggctgcaacaagaaccttgggtt
gccagaagaatttgtaaatttttgggatattcacctttggcgttagagttagtggggcga
tatctcaataaaataccggatttatctttagaaatactgctaaagcggctagagaaaaag
cgagaggaacatgaagccgtagccaatgctaactcattgatgcattacgaatacggtgta
gctgaagcttttgaattgagttgggaacaactagatgagaatgcacaaagctttggctgt
ttcctaagtttgtgtgctttagctgacattcccttatctgtggagacgatagaagacgag
aaaaaacaacaactcaatgaaaaagcgatcgccgatttactggaattgcatttgctacaa
cacaaaagtaaagtaatttatcttttaaatcccttaattcggcaacttctccgaataaaa
ttagataattcaaaagaagcggatgaagcaaaaactaaatttgcagcaatgatgttagag
gtagcaaagctaattccgcaacagcttaacccagaagatattgtcaattttactccacat
attccgcacattacagaagttgcaacccacctatctcagtatctcagtgatgaaaacctc
atcgctctgtttactaaattagcttcgttttatcaaggtcaaggactttatcagcaagca
gaatcttggttgcaacggagtgtaaaactaactcaaaatcatcttggtttagaacattct
tatatcgctgctagcctcaacaatttagcaggactttatgaatctacaggacgctacagt
gaagccgaacccttgtatcggcaagctttagaactgagaaaacgcctcttgggagacaat
catcttgatgtcgccactagcctcaacaatttagcattactctacgaatctacagggcgc
tataacgaagccagacctttgtttgagcaagctttaaaactgagaaaacacctgctggga
gaagaacatcccgatatcgctactaatttgagctatttagcagtagtctacgaatctata
ggacgctatggcaaagccgaatctttgtatcagcaagctttagaactctggaaacgctta
gtgggagaagaacatccccatgtggctactagcctgaacaatttaggagcattgtactgt
tttacaggacgctatagcgaagccgaacctttactcaagcaagctttaaaactgagaaaa
cgcctgctgggagaagaacataccgatgttgctactagcttgaacaatttaggacaactt
tacgaatctacaggacgctacagcgaagccgagcccttttataagcaagccttggaactg
actaaacgtctcttgggagaaaaccatcccgatgtcgccattagcctgaataatttagca
gcactctaccgtcatacaagacgctacaggaaagcaaaaccactgtttgagcaagctttg
aaaatttgcgaacggactttaggtgtcagtcatcctactactatgacagttcgggcgaat
tatgcaagttttttaagagaaacataa
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