Nostoc linckia: NIES25_41240
Help
Entry
NIES25_41240 CDS
T10227
Name
(GenBank) phycobilisome linker polypeptide ApcE
KO
K02096
phycobilisome core-membrane linker protein
Organism
nlk Nostoc linckia
Pathway
nlk00196
Photosynthesis - antenna proteins
nlk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
NIES25_41240
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
nlk00194
]
NIES25_41240
Photosynthesis proteins [BR:
nlk00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Allophycocyanin (AP)
NIES25_41240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBS_linker_poly
Phycobilisome
Motif
Other DBs
NCBI-ProteinID:
BAY77657
LinkDB
All DBs
Position
complement(4945903..4949211)
Genome browser
AA seq
1102 aa
AA seq
DB search
MSVKASGGSSVARPQLYQTLAVATITQAEQQDRFLGNGELNELASYFASGAKRLEIAQTL
TENSEIIVSRAANRIFVGGSPMAFLEKPREPELVAASAASGDVQQGMQLGTITYVESRGG
FLENLRSIFNSSPSGPTPPGFRPINIARYGPSNMAKSLRDLSWFLRYATYAIVAGDPNII
AVNTRGLREIIENACSGEATIVALQEIKAASLSFFRRDAEATEIVSQYMDVLLTEFKAAT
PSNKLRQRPSSDQQGLQLPQIYFNAAERRPKFVMKPGLSATEKNEVVKAAYRQIFERDIT
RAYSLSISDLESKVKNGDISMKEFVRRLAKSPLYQKQFYQPFINSRVIELAFRHILGRGP
SSREEVQKYFSIISNGGLAALVDALVDSAEYGDYFGEETVPYLRGLGQEAQECRNWGPQQ
DLFNYSAPFRKIPQFITTFAAYEQPLPDQHPYGSGNDPLEIQFGAIFPKETRNPSTSPAP
FGKDTKRILIHQGPGINNQNSNPLARGEAPGSLGRKVFKLDQLPGTVGRKAPKNSSIRFS
ESSTQAVIRAAYLQVFGRDVYEGQRQKVLEIKLENGDISVREFVRALAKSDVFRNLYWSS
LYVCKAIEYIHRRLLGRPTYGRQEINKYFDIAAKQGFYAVVDTIINSVEYSEAFGEDTVP
YERYLTPAGVSGRQLRVGTIREDIAPKVQKEETPSFVTLGTVSEKRTEPDIQFRINQGVS
KQREQTKIFKLVANTGDKVAVKTLISAAYRQIFERDIAPYIAKNEFSAWESKLGNGEISV
KEFIEGLGYSNLYLKEFYTPYPNTKVIELGTKHFLGRAPLDQAEIRKYNQILATQGIRAF
IATLVNSVEYNEVFGEDTVPYRRFPTLPAANFPNTEKLYNQLTKQNDDVVVPSFKPVQAR
PGSSDTPLLAQAIADIASQKASQPSYAELGRSYSNGSGQTVELGVRKHARIYRLTESTTL
AERQQAVNAIYSQVLDIYSGQVLDNFRLTDLDSKLQDGEISVREFVRQLASSEIYRQRFF
LPYPRAKVIEFLFRHLLGRAPATQEEIRQYNKLLDDSGLPGAVKAIVESLEYSRYFGEDV
VPYNRFPSVPAGNYLGSVQAAE
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaaggcaagtggtggaagctcagttgcgcgtccgcaactatatcaaacccta
gctgtagcgacaattacccaagcggagcagcaagaccgctttttgggcaatggtgaacta
aatgaactggcaagctattttgcatctggagcaaagcgtctagaaattgcccagacgctc
acggagaattccgagatcatcgtatctcgagctgccaaccggatttttgtcggtggttcg
ccaatggcttttttagaaaagcccagagaaccggaactagtagctgctagtgctgctagt
ggtgatgttcaacaggggatgcaactaggaacaataacttacgttgaaagccgtggtggg
ttcctagaaaatttacgctcaatctttaactcatccccctcaggcccaacacctccaggt
tttagaccaattaacattgctcgttatgggccgagcaacatggccaagagcttgcgggat
ttatcctggttcttacgctatgctacttatgcgatcgtggctggcgaccccaacatcatc
gcagtgaatacacgcggtttacgggaaataattgaaaatgcctgctctggtgaagcgaca
atagtggctttgcaagaaattaaagccgcgtcactttcctttttccgtagggatgctgag
gctacagaaattgtgtctcagtacatggatgttttgcttacagaattcaaagcagccaca
ccttccaataaactgcgccaacgtccttctagcgaccaacaaggcttgcaactgccacaa
atttactttaatgcggcagaacggcgtcccaagtttgtgatgaaacctgggttgtcagct
accgaaaaaaatgaggtagtaaaagcagcctatcggcaaatctttgagcgcgatattacc
cgtgcttacagcttgtctatttctgacttagaatccaaagtcaagaatggcgacatctcc
atgaaggagtttgttcgtcgtctagctaaatctcctctttaccaaaaacagttttaccag
ccttttattaacagccgagtcatcgaactagctttccgtcacatcctgggacgggggcca
agtagccgggaagaagtacaaaaatatttctcaattatttctaacggtggtctggcagct
ttagtagatgccttagtagattctgctgaatatggcgactattttggcgaagagacagta
ccttacctgcggggtctgggtcaagaagcccaagaatgtcgcaactgggggccgcaacaa
gacctgtttaactacagtgcgcctttccgtaagatacctcagttcatcaccacattcgcg
gcttacgagcaaccgctaccagaccaacatccttacggttctggtaatgaccccttagaa
attcaatttggggcgattttcccgaaagaaacccgcaaccccagcaccagtccggctcct
tttggcaaggataccaaacgcatcctgattcaccaagggccagggattaataaccaaaat
agcaatcctttggcacgcggtgaagctcctggtagccttggacgcaaggtgttcaagttg
gatcaattgcctgggactgttggcagaaaggctccgaaaaattctagtatcagattttcc
gaaagctctacccaagcagtgattagagctgcctacctacaagttttcggtcgggatgtt
tacgaaggccagcggcaaaaggtattggaaatcaagctggaaaacggtgatatttccgtg
cgggagtttgtccgtgctttggctaagtcggatgtattccgtaatttgtactggtcatcg
ctgtatgtttgtaaagcgatcgagtacattcaccgtcgtttgttgggtcgtccgacttac
ggtcgtcaagaaatcaacaagtactttgatatcgccgctaagcaaggcttttacgcggtg
gttgacaccatcattaacagcgtagaatacagcgaagcatttggtgaagatacagttcct
tacgaacgatatctgactcctgctggtgtatcagggcggcaactgcgcgttggtactatt
cgtgaagatattgccccgaaagtccagaaggaagaaacaccgagctttgtgacactaggt
actgttagtgaaaaacggacagaaccagatattcagttccgcattaaccaaggtgttagc
aaacagcgcgaacaaaccaaaatcttcaagttggtggcgaataccggtgacaaagttgca
gtgaaaactttgattagcgctgcctatcgtcagatttttgaacgcgatattgcaccttac
attgccaaaaatgaattttcggcatgggaaagcaagctgggtaacggcgaaatcagtgtg
aaagaatttattgaaggtttgggttactcaaatctctacctgaaagaattctacacaccc
taccccaacacgaaagtaattgagttaggaaccaaacacttcctcggacgtgcgccacta
gaccaagcagaaatccgcaagtataaccagattttggcgactcaaggtattcgtgccttt
atcgctactttggtcaatagtgtggaatataacgaagtcttcggtgaagatactgtgcct
taccgtcgcttcccgaccctaccagcagcaaacttcccgaataccgagaagctttacaac
cagctgaccaagcaaaatgacgacgtagttgtaccgagctttaagcccgtgcaagcgcgt
ccaggatctagcgatacgccgcttttagcccaagcgatcgcagatatcgcaagccagaag
gctagccagccctcctatgccgaactgggtcgttcttacagcaatggtagcggacaaacc
gtagaactgggcgtgcgaaaacatgcacgtatttaccgtttgacagaaagtacgacctta
gcagaaagacaacaggcagttaacgccatttactctcaagtattggatatctacagtggt
caagtgctggataatttccgcctgactgacctagatagcaaactccaggatggtgaaatt
tctgtccgcgagtttgtccgccaactggctagttccgaaatctatcgccagcgcttcttt
ttaccttatccgcgtgccaaggtaattgaattcctcttccgtcatctattgggacgcgca
cccgcgactcaagaagaaattcgccagtacaacaaactgctagatgatagcggtttgcca
ggggctgtaaaagcaatagtcgaaagcctagaatacagccgctactttggtgaagatgtt
gtgccttacaaccgctttccatcggtgccagcaggtaactaccttggcagcgtgcaggcg
gctgaatag
DBGET
integrated database retrieval system
