Nostoc linckia: NIES25_42140
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Entry
NIES25_42140 CDS
T10227
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
nlk Nostoc linckia
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nlk03016
]
NIES25_42140
Enzymes [BR:
nlk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NIES25_42140
Transfer RNA biogenesis [BR:
nlk03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NIES25_42140
Prokaryotic type
NIES25_42140
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BAY77746
LinkDB
All DBs
Position
complement(5048355..5049314)
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AA seq
319 aa
AA seq
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MQITFLGTSSGVPTRSRNVSSVALRLPQRAELWLFDCGEGTQHQILRSELKISQLSRIFI
THMHGDHIFGLMGLLATCGLAGNVERIDIYGPPGLNEYIQAASRYSHTHFSYPIKVHAVR
PGIIYEDDDFIVSCGNLHHRITAFGYRVAEKDRTGRFDIEKAKALQIPSGPIYGQLKRGE
TVTLEDGRVIHGAQLCGPTEIGRKIAYCTDTVFCDGAVELAKDVDVLIHEATFAHQDADM
AFQRLHSTSTMAAQTALAAGAHRLIMTHFSPRYAPGNNLELKDLLQEARAIFKNTDMAYD
FMVHEVPRRREVELTKVSV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgcagataacattcttagggacgagttccggggtacccacgcgatcgcgcaatgtttcc
agcgtcgccctgagattaccccaaagggcagaactgtggttatttgactgtggcgaaggc
actcagcatcaaattttgcggagtgaactaaaaatcagccaactctcccgaatttttatc
actcacatgcacggcgaccacatttttggcttgatggggcttcttgctacttgcggcttg
gctggcaatgtagaaagaattgacatttacgggccgcctggattaaacgaatacattcaa
gccgcctcccgttattcccacacacatttttcctatccgattaaagtccatgccgtccgt
ccagggataatttatgaagacgatgacttcatcgttagctgtggtaatttacatcaccgg
attacagcttttggttatcgcgtagccgaaaaagaccgtacaggaaggtttgatatcgaa
aaagccaaagccctgcaaattccttccggcccgatttacggtcaactcaagcgcggtgaa
acagtaacccttgaggatggacgtgtgattcatggtgcccaattgtgcggccctacagaa
attggccgcaagattgcctattgtacagacacagttttttgcgatggtgcagtggaatta
gcgaaggatgtagatgtattaattcacgaagccacctttgcccatcaagatgcagacatg
gcttttcaacggttgcattccacaagcacaatggcagcccaaacagctttagctgctggc
gcacatcggctgattatgactcattttagtccccgttatgctcccggaaataacttagag
ttaaaagatctccttcaggaagcccgtgcgatttttaagaatactgacatggcttatgat
tttatggttcatgaagtaccgaggcgacgggaagtggagctaaccaaagtaagcgtctaa
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