Nostoc linckia: NIES25_42680
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Entry
NIES25_42680 CDS
T10227
Name
(GenBank) ABC transporter-related protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
nlk Nostoc linckia
Pathway
nlk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES25_42680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlk02000
]
NIES25_42680
Enzymes [BR:
nlk01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NIES25_42680
Transporters [BR:
nlk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES25_42680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
HisKA
SMC_N
ABC_ATPase
AAA_29
Zeta_toxin
PilB3_C
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BAY77799
LinkDB
All DBs
Position
complement(5110340..5112589)
Genome browser
AA seq
749 aa
AA seq
DB search
MSTRKLLLRFAKPYPGLILLTILLGFSGALFNGISTALIVPVVLKIVGQEVDLTSAPPIL
KKMISPFDNAPESYRIGIMAGAIILTIILKNLATYASALASSSLTRKLTADMREAGLKLL
LEIDIDYYAKTKVGDLINRLGGEIGRAASAVGSTVKIVILGITILVFVGLLLSISWQLTI
AATLLLSLVTLVNQYTISRSKFFGKMLSEMSKAYSISVLETLNGIRLVKATGNEEKEFQR
IQKLIRDREKADFQSQVNSEAITPIGEVMGITALLMIVILSKAFFANEVSSLSTVLLTYL
LVLLRVLPLLSQLNTIRSNFASTAASVDVANEFLTLDDKPFMGNGKIPYTKLQEGVSFNS
LCFAYPGHEKLVLKDVNLYLPRGTTLALVGGSGAGKSTIADLLPRFYDPIAGAITIDGID
LRQFNIVSLRKRMGIVSQDTFLFNDSVKNNIAYGCPEATDDEILTATKRANAYEFISKLP
QGFDTLIGDRGVMLSGGQRQRLAIARALVQNPEILILDEATSALDTVSERLVQTALDELS
RDRTTLVIAHRLSTVQKADKIAVLDRGQVVEVGTHEQLLQKGGYYSRLYSMQFAEHPETV
TKQNQSLLRISHEIRTQLNSMIGFLRLLLDDLVDDAQERQELIEDSYKSAWRILNTIDVF
DDVINSQIRGQMLSISDENQNVISSHYQNFNQISAEFRTSLNLILSSLRSLSNNLIYSLE
EQIQFLSESYDSAIYLINNLEKFEDSING
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccagaaaactactactaagattcgcaaaaccgtatccaggtttgattctgctg
acaatattgttaggattttctggagctttatttaatggtattagcacagctttaattgtg
ccggtggttttaaaaattgtcgggcaagaagtagatttaactagtgcacctcccatcctg
aaaaagatgatatctccgtttgataatgctccagaaagttatcggatagggataatggct
ggggcaattatattgacaattattttaaaaaatttagctacttatgctagcgcgttggcg
tcgagttccctcactcgcaagctaacagctgatatgcgagaagcaggattaaagctatta
ctagaaattgatatagattattatgccaaaaccaaagttggcgatttaatcaaccgcttg
ggtggagaaattggacgtgctgccagcgctgtaggtagtacagtcaaaatagtgattctg
ggaattacaattttagtttttgttggtttattgctgtcaatttcttggcaattgacaatc
gcggctacgctgttgctgtcattagtgacattagtaaaccagtatactatttcccgttct
aaattttttgggaagatgctcagtgaaatgtcgaaagcatattcaatttctgtgctggag
acattgaacggaattcggttagttaaagccacaggaaatgaagaaaaagaatttcaacgg
attcaaaaattaatccgcgatcgcgaaaaagcagacttccaatctcaggttaattcagaa
gcaatcacacccataggtgaagtgatggggattacggctttgctgatgattgtaattttg
agtaaagccttttttgctaatgaagtttcttccctttccaccgtacttttgacatattta
ttagtattgctgcgagttttaccattactttctcaacttaatactattcgcagtaacttt
gctagtaccgccgctagtgtggatgtggcaaatgagtttttaactttggatgataagcca
ttcatgggcaacggtaagattccctacacaaaattacaagagggagtatcttttaattct
ttgtgctttgcttaccccggtcatgaaaagttagttctcaaagatgtcaatttatattta
ccgcgtggcacgactttagcattagtaggcggttctggtgctggaaaatcgacgatcgca
gatcttttgccgagattttacgaccccatcgctggtgctattaccattgacggcatcgat
ttacgacaatttaatatagtatccctgcgtaagcggatgggaattgtcagtcaagatacc
tttctttttaatgattcggtaaagaataacatcgcatacggatgccctgaagcgacagac
gatgaaattctgacagcgaccaagcgggcgaatgcttatgaatttattagcaaattgcct
cagggatttgacaccttaattggcgatcgcggcgtgatgttatctgggggacaaagacaa
agattagcgatcgcccgcgcattagtgcaaaatcccgaaattttgattttagatgaagcc
accagtgctttagatactgtttccgaacgtttagtgcaaactgcactcgatgaactcagc
cgcgatcgtaccacattagtaattgctcaccgcctttccacagtccaaaaagccgataaa
attgccgtattagatcgaggacaagtagtagaagtgggaacccacgaacaacttttacaa
aaaggtggttattactcacgcctctactcaatgcaatttgcggaacatcctgaaactgtt
accaaacaaaatcaaagcttactccgcatctctcacgaaattcgcacgcaattgaactca
atgattggatttttgcgtttattactggatgacttggtagatgatgcccaagaacgacaa
gaattaattgaagactcttacaaatcagcttggagaattctcaacaccattgatgttttt
gatgacgtgattaactcgcaaattagggggcaaatgctttcaatttccgacgaaaatcag
aacgtcatcagtagccattatcaaaattttaatcaaatatcagccgaatttcgcacttcc
ctgaatctcattcttagctctctccgctctctatctaataatttaatttacagccttgaa
gaacaaattcaattcctttctgaaagttatgattctgccatatatctaattaataacttg
gaaaaatttgaggatagtattaacggttaa
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