Nostoc linckia: NIES25_43660
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Entry
NIES25_43660 CDS
T10227
Name
(GenBank) DNA photolyase, FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nlk Nostoc linckia
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlk03400
]
NIES25_43660
Enzymes [BR:
nlk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NIES25_43660
DNA repair and recombination proteins [BR:
nlk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NIES25_43660
Prokaryotic type
NIES25_43660
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAY77896
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Position
complement(5234909..5236354)
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AA seq
481 aa
AA seq
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MSDLILFWHRRDLRISDNTGLAAARRQSPKVVGVFCLDPLILERDDVAPVRVTYMIGCLE
KLQQRYAEVGSELLILHTDPVEGIPALAEALSAKAVFWNWDVEPYSQERDRTIINALKEK
SIEFLTQNWDQILHSPEEIRSGSNQPYTVYTPFWKNWISKPKSQPVETLQNVEGLTEAER
EIAKQAGAIPLPSAKDLGFIWDGGLILSPGEAEAQERLEEFSTKAITEYQEQRNFPAVDG
TSQLSAALKFGVIGIRTVWQATTQAQENSRSEEATVAIRTWQQELAWREFYQHAMYNFPE
LADGAFREAFKNFPWETNEEHFQAWCEGRTGYPIVDAAMRQLNESGWMHNRCRMIVASFL
TKDLLINPQLGEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPVRIFNPASQAQKFDPDG
EYIRQWVRELRSVDTEYLVTGKIPPLERHAAGYPEPIVDHKRQQQQFKQRYQEQKIASSP
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttaattctgttttggcatcgtcgtgatttacgtatttctgataatacggga
ttggctgcggcacggcggcagagtccgaaagtggtgggtgtgttttgtctcgatccgctg
attttggaacgagatgatgttgccccggtgagggtaacttatatgattggttgtttggag
aaattacaacagcgatatgccgaagttggcagcgagttgttaatacttcataccgatccc
gtggaagggataccagctttagctgaggcgttatcagcgaaagctgttttttggaattgg
gatgtagaaccttattcccaagaacgcgatcgcaccattataaatgccctcaaagaaaaa
agtattgagtttcttacccaaaactgggatcaaattctccattccccagaagaaatacgg
tcgggcagtaatcaaccttatacggtttatactcccttttggaaaaattggattagcaaa
cctaagagtcaaccagtagaaactctgcaaaatgttgaggggttaacggaagctgaacgg
gaaattgcaaaacaagcaggagcgataccattaccttctgcaaaagatttaggatttatt
tgggatggaggattgattctttcaccaggagaggcggaggcgcaagaacggctagaggaa
tttagcactaaagccattactgaataccaagaacagcgcaattttcccgcagttgatgga
acatcgcaactgagtgcagctttgaaatttggcgttattggcattcgcactgtttggcaa
gccacaacccaagcgcaagaaaatagtcgcagcgaagaagcaacagtcgctatccgcaca
tggcaacaggaactagcttggcgcgagttttatcaacacgcaatgtataactttcccgaa
ttggctgatggtgctttccgcgaggccttcaaaaattttccttgggaaactaacgaagaa
catttccaagcttggtgtgagggtagaactggctaccctattgtggatgcagcaatgcgg
cagttgaatgaaagtggctggatgcacaaccgttgtcggatgattgtcgctagttttctc
accaaagacttactaattaatccccaactgggagaaaaatacttcatgcagaaattgatt
gatggtgatttatctgctaataatggcggttggcaatggagtgcttctagtgggatggac
ccgaaacccgtgcgaatttttaacccagccagccaagcacaaaaattcgatccagatgga
gagtacattcgccaatgggtgagagaattgcggtctgtggatacagaatatttagttact
ggtaaaattccacctttagaacgccatgctgctggctatccagaaccaatcgtagatcat
aaaagacaacaacagcagtttaaacagcgttatcaagaacaaaaaatcgcgagtagccct
cagtaa
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