Nostoc linckia: NIES25_47280
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Entry
NIES25_47280 CDS
T10227
Name
(GenBank) DNA photolyase, FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nlk Nostoc linckia
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlk03400
]
NIES25_47280
Enzymes [BR:
nlk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NIES25_47280
DNA repair and recombination proteins [BR:
nlk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NIES25_47280
Prokaryotic type
NIES25_47280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAY78257
LinkDB
All DBs
Position
complement(5724424..5725971)
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AA seq
515 aa
AA seq
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MHLLWFRRDLRLTDNEIVTLASGNNAAVLPFFIIDPWFYQWVDVGKARVRFLFESLENLD
SNLQKIGSKLILFQGNAVEIIQELTQQLIQQGHRPKLYFNRDVQVEYGISRDRSIVNLYQ
ALNLDYNLGLNNFLQSQDKREQWFNEYYTYQRKSIYQTPTNINTPSLSLNVPQITFDELK
HKYRDFLQTEQVYFLGGETQAQATLNSFLKSRFNGYHWKLSRPWLAQQGATSHLSPHLTF
GTISTRIVYQETKARAAELTNQPKAEFSLKAFRDRLRWHDSFTQRLYFYPEIAYKNRYPE
FDEWYTPLELPPQKQELFQAWLEGLTGFPLLDASMRQLKTMGWMNFRMRAMCATFLTINC
GVSWHHGARHYMNYLVDGDLAIDNWQWQMQAGVTNPLSDTFRIYNPNKNIAEKDPDLKFI
YYWVSELKGYSLSEIIQGKYIGISSYPQTILDLAKTRKVNGKIISELRKKVRERLTLQGG
TDYESAVAAKETVNKYWQHKDREYKEFKELKAELE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttctgtggtttcgtcgagatttacgtttgactgacaacgaaattgtcacctta
gcgtccggtaataatgccgcagttctaccattcttcattatcgatccttggttttatcaa
tgggtcgatgtcggtaaagcacgggtgcggtttttgtttgagtctttagagaatctagat
agcaatttacaaaaaataggtagcaaactaatattatttcaaggtaatgctgtagagatt
atacaagaattaactcaacagttaatacagcagggacatagaccaaaactctactttaat
cgggatgtccaagttgagtatggtattagccgagatcgaagtatagttaatttgtatcaa
gcattaaatctcgattataatctcggactaaataactttttacaatcacaagataaacgc
gaacagtggtttaacgaatattatacatatcaaagaaaatctatatatcaaactcctact
aatatcaatactccatcactttctctaaacgtaccccaaattacattcgatgaactaaaa
cataaatatcgtgattttttgcaaacagaacaggtatattttcttggtggagaaacacag
gcacaagctacattaaattcatttctgaaaagtagattcaatggctatcactggaaactt
tcacgcccttggttagcacagcaaggcgcaacatcgcatttatcaccacatctgactttt
ggtacaatttcaactcgtattgtttaccaagagactaaggcaagagcagcagaacttaca
aatcaacccaaggcagaattttcattaaaagcatttcgtgaccgtctacgctggcatgat
agttttacacaacgcctttatttttacccagaaatagcttacaaaaatcgttacccagaa
tttgatgaatggtatacacccctagagttaccaccacaaaaacaagaactatttcaggca
tggcttgaagggttaacaggctttcccctactagatgccagtatgcgacaactaaaaact
atgggctggatgaattttcgcatgagggcgatgtgtgccacatttttaactatcaattgc
ggtgtttcttggcatcatggcgctagacattatatgaactatttagtagacggtgattta
gcaattgataattggcaatggcaaatgcaagcaggtgtaactaatccattaagtgacact
tttagaatatataatccaaacaaaaatattgcagaaaaagacccagacctcaaattcatt
tactattgggtaagcgaactaaaaggttacagtctatcagaaattattcaaggtaaatat
attggcattagttcttatccacaaactattttagatttggctaaaacccgcaaagttaat
ggtaaaatcatctctgaacttcggaaaaaagtaagagaaagattaactctccaaggtgga
acagactatgaaagtgcagttgcagctaaagaaacagtaaataaatactggcaacataaa
gatagggagtacaaagaattcaaagaattaaaggcagaactagagtag
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