Nostoc linckia: NIES25_48030
Help
Entry
NIES25_48030 CDS
T10227
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nlk Nostoc linckia
Pathway
nlk00550
Peptidoglycan biosynthesis
nlk01100
Metabolic pathways
nlk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NIES25_48030
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIES25_48030
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nlk01011
]
NIES25_48030
Enzymes [BR:
nlk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NIES25_48030
Peptidoglycan biosynthesis and degradation proteins [BR:
nlk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NIES25_48030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PP-binding
Motif
Other DBs
NCBI-ProteinID:
BAY78329
LinkDB
All DBs
Position
5860110..5861963
Genome browser
AA seq
617 aa
AA seq
DB search
MTLLKPSPFGGKKNTRTVGRGVQPIFFIVFTLLMVAGIGTRLAYLQIVEGANHRKRAEAN
RIRTIPKQPERGNIFDRNGKLLASTRYPRSVYLWPMAHTKPSWSVVAPRLSQVLDVPQEE
MEKKLEEAGANSSSLIRIARDLNEAQITALKEYESELKDVEISTEAVRYYPHGKELAHVL
GYTRELTPEQLKEKKHEGYRLGDVIGQMGVEKAYEKMLRGEWGGQQVEVDGAGRPLRVLG
EKEAKAGNDLHLTIDLDVQKAAEKALGNRNGAIVAIDPNNGAILAMVSYPTFDPNIFSKQ
KLSQKDWESVQGKNHPLVNRALSAFPPASTYKIITTTAGLESGKFSPDSILQTYGSLTIG
GVTFGEWNHAGFGPLGFPRAMAMSSDTFFYQVGRKVGGPSLIEWSRKYGFGQKTGIEFVN
EESKGLVPDEIWKQKVMKAPWTIGDTINMSIGQGALQVTPLQSAIMFSVPANGGYRVQPH
LLKDNEEAKSWRESLNMKSETIKVLRDGLRKVVSEGTGKRLDVPTIAPASGKSGTAEAGV
GRPNHTWFGAYAPTNKPEIVVVAFGENSGDHGGTVCGPMALQVLEAYFQHKYPGKYQKPQ
SEASEAKTQNSGHSTGD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaccttattaaaaccatctccatttggcggtaaaaaaaatacacgcacagtcggacgc
ggtgtccagccgatatttttcatcgtatttactctattgatggtggcgggaatcggtact
cgtttagcatacttgcaaattgttgaaggagcgaatcaccgcaaacgagcagaagcaaat
cggattcgcacgatccccaaacaaccggagcggggcaatatttttgaccgcaacggcaaa
ctcttagctagtactcgctatccgcgctctgtatatttgtggccgatggcacacactaaa
ccttcgtggtcggttgtggctccacgtctatctcaagttcttgacgttccccaagaagag
atggaaaagaaactagaagaagctggtgctaactcttcttcgctgattcggattgctcgt
gacttgaacgaagcacaaattacggcattaaaggagtatgaaagcgaactcaaagacgta
gaaatttccacagaagcagttcgctattacccgcacggcaaagaattagcgcatgtatta
gggtatacacgagaattaactcccgaacagttaaaagaaaagaaacacgaaggctataga
ttgggtgatgtcatcggtcaaatgggagttgaaaaagcttatgagaaaatgctgcggggc
gaatggggaggtcaacaggtagaagtagatggtgctggccgaccgctgcgagttttgggt
gagaaagaagccaaagctggtaatgatttgcacttaactatagatttagatgtgcaaaag
gcagcagaaaaagctttaggtaatcgcaatggagcgatcgtggcgatcgacccgaataat
ggtgctattttagcaatggtatcttatccgacctttgacccaaatattttttctaaacaa
aaactctcccagaaagattgggaaagcgtgcaaggtaaaaaccatcctttagtaaatcgt
gctctgagcgcctttccacccgccagtacgtataaaattattactacgacagctgggttg
gaatcgggtaaattttctcctgactcaatattacaaacctatggttccctgaccattggt
ggggtaacttttggcgagtggaaccacgctggatttgggccattaggatttcccagagca
atggctatgagtagtgatactttcttttatcaagttggcagaaaagtcggcgggccaagt
ttaatcgaatggagtcgcaaatacgggtttggtcaaaaaactggcattgagtttgtcaac
gaagaatcaaaaggcttggttccagatgaaatatggaagcagaaagttatgaaagcacct
tggactataggtgacaccattaatatgtcaattggtcaaggcgctttgcaagtgacaccg
ctacaatcagcaattatgttttctgtccctgctaatggtgggtatcgagttcaaccgcat
ttactcaaagacaacgaagaagcaaaaagttggcgagagtccttaaatatgaagtcggaa
actatcaaagttctccgcgacggactgcgaaaggtagtgagcgagggtacaggtaagcgc
ttagatgtgcccacaattgccccagcttctggaaagagtggcaccgctgaagccggtgtt
ggtcgcccaaatcatacttggtttggtgcttatgctcccactaataagccagaaattgtg
gttgtagcgtttggtgaaaactccggcgatcatggcggtacagtttgcgggccaatggct
ttacaagtactggaagcttattttcagcataaatatcctggtaagtaccaaaaacctcag
tccgaagcatcagaagccaaaactcagaattctggacatagtactggagactaa
DBGET
integrated database retrieval system
