Nostoc linckia: NIES25_55690
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Entry
NIES25_55690 CDS
T10227
Name
(GenBank) helicase domain-containing protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
nlk Nostoc linckia
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlk03021
]
NIES25_55690
Transcription machinery [BR:
nlk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NIES25_55690
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
RapA_C
Motif
Other DBs
NCBI-ProteinID:
BAY79087
LinkDB
All DBs
Position
plasmid1:complement(327186..330488)
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AA seq
1100 aa
AA seq
DB search
MIEVGLLVQSQNNYLGIGKVIEISETNAIVEYFCSMAQRLQKTLPLSSLSQVRLEPQARC
YIKSENQDKWIIGRVFAWDEDTEEYQIDLPDKKTAIVTEEEIYVRCNLPNTDPIETLAMK
GHETPYFHDKRLAFVKSLIQQRAVSRGMTGLISANINLYPHQVEVVRRVLEDPIQRYILA
DEVGLGKTIEAGAILRQFLLDEPKKGAIVIVPQYLLQQWRTELENKFYISHFPKRVAVLA
VEDVHKINLRANIGCLILDEAHHIAAMANSKNAAVLQRFETCKQLAHKSDRLLLLSANPV
VNHEQDFLAMLYLLEPETYRLNDLEGFRAQVASRQQIGKVLLALREDAKPVVLKNNLQEL
RNLFPDDKYLLKLAEDLETCLAGNSAEQNQLVQAIRSHISDTYRLYRRMLRNRRAAVEDV
IFDRNFTPKEEYDLDERSLDIHELIQQWRSVAPKEKQYQRIFLLLFLASGTWLGILEQVI
TTRLTGKPHAKLSQEFKEDDIRLLTTTPKFSGEEDILQSILKIIRQPVEDGERKENLRTV
LLNQLGTYFKIPANVRRNQKEFLTRIQQRIKRPIAGDIFPKFIIFTSFAQSCAEIVRYLS
DTFGAEAVVSHQFGESPDKVESGLNRFKNNPNCFILVCDRSGEEGRNLQFADWLIHFDLP
WSPNQLEQRIGRLDRIGSKIGIQSCVLIGPYLEDSPHNAWYQVLKDGFGIFQQSIASFQF
YVDEKLPELEAALFESGAAGLVQMIEPIKTQIQAEIVKISELNALDEIDASDENATEYFQ
ELDNYDARHLEMKRAIEGWICDALGFKPMTNPDSPEMKRYQPITRTLVPVNELKTRFADS
YLDKYGTYNRRIANQSSDVKLLRIGEGFVEALLNYIDWDDRGQAFAMWRTDASWDAKEGK
EWFGFQYNYIVEANLKIAKQVLIENKLDSSQYKILQRRVDALFPPIMETIYIDGRQEPIS
VVEDRVLLDILQRPYKDRNNNQQRDYNLAKERLEIIDDFVEPSKWQNYCYEVRNASLALL
SNRPDFIELCEKRSLVAEKKLSNRVEQLRLLLNQQSWDQALAEELKIETALSAAILEGIR
RPQIKLDSVGFIIVSGRSLA
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagttggtttactagtacagtcccagaataattatttgggtataggaaaagtt
atcgaaatatctgagactaatgcgatcgttgagtatttttgctctatggcgcaacgtcta
caaaaaactttacctttaagttcgctctctcaagtcaggcttgaaccccaagcgcgatgc
tatattaagtccgaaaaccaagataaatggataattggtagagtttttgcctgggacgaa
gatacagaagaatatcaaattgatttaccagataagaagactgcaattgttaccgaagaa
gaaatttacgtccgttgtaatttaccgaacacagaccccattgaaactttagcaatgaag
ggtcacgaaacgccgtacttccacgataaaagattggctttcgtgaaatctttgattcag
caacgcgcagttagtcgcgggatgacgggactaatttcggcaaatattaatctttatccc
catcaggtcgaagttgtccggcgggtactagaagatccaattcaacgttatattttagca
gacgaagtaggactcggaaaaaccatcgaagcgggtgcaattctgcgccaattcctgtta
gatgaaccgaaaaaaggtgcgatagtcatagttccccaatatttgctgcaacaatggcgg
actgagttagaaaacaagttttatatttcgcattttcccaaacgagtagcggtgctagct
gttgaagatgttcataaaattaatctgagagctaatatcggctgtttaatattagatgaa
gcccatcatatcgcagcaatggcgaactctaaaaatgcagcggtgcttcagcgttttgag
acttgtaaacaactagctcataaaagcgatcgcttacttttattatccgctaatcctgtt
gtgaatcacgagcaagatttcttagcaatgttatatttgctcgaacccgaaacctataga
ttaaatgatttagaaggttttcgcgctcaagttgccagccgccaacaaataggtaaagta
ctgctggctttgagagaagatgcaaagcctgttgtcttgaaaaacaatttgcaggaatta
cgcaacttgtttcctgacgataagtatttactcaagttagcagaggatttagaaacttgt
ttggcaggaaattctgccgagcaaaatcaacttgtccaagcaattcgcagccacatcagc
gatacctatcgattatatcggcgaatgcttcgcaaccgtcgcgctgcggtggaagatgtg
atatttgaccgcaattttacacccaaagaagaatacgatttagatgagcgatcgcttgat
attcacgaactcatccaacaatggcgtagtgttgctcccaaagaaaagcaatatcagcga
attttcttgttattattccttgcttcgggtacttggttaggcattttagaacaagtaatt
acaactcgtttaactggtaaaccccatgctaaattgagccaggaatttaaagaagatgat
attcgcttattaactacaactcctaagttttccggcgaagaagacattttacaatcgata
ttaaagattattcgtcaacctgtagaagacggagaacgcaaggaaaatttaagaacggta
ttgctaaatcagctaggtacatacttcaaaattccggcaaacgttcgcagaaatcaaaag
gaatttctcaccagaatacagcagagaatcaagaggccaattgcaggcgatattttcccc
aaatttattatatttacaagttttgcccaaagttgtgcagaaattgtccgctatttatct
gatacctttggtgcagaggcagtagtcagccatcaatttggagaatcaccggataaagtt
gagtctggcttaaatagattcaaaaacaatcccaactgctttattttagtatgcgatcgc
tctggagaagaagggcgtaatctccagtttgctgattggttaattcatttcgatcttcct
tggtcgcctaatcaattagaacaaagaattggtagacttgaccgcattggcagcaaaatt
ggcatccagtcttgtgtattgattggcccctatttagaagatagtcctcacaatgcttgg
tatcaagttttgaaagatggatttgggatttttcaacaatcaattgctagtttccagttt
tatgtagatgaaaaattgccagaattagaagcagctttatttgaatcaggtgctgctgga
ctcgtgcaaatgattgagccaatcaaaacacaaatccaagccgaaatcgtcaagattagc
gaactgaatgctttagatgaaatcgacgctagtgatgaaaatgcaaccgaatattttcaa
gaattagataattatgatgctcgtcatttagaaatgaagcgagcaattgaaggctggatt
tgcgatgcgctgggtttcaaaccaatgactaacccagattctccagaaatgaaacgttat
caaccgataacccgtactttggtgccagtaaatgagttaaaaacccgttttgctgacagt
tatttagataaatacggtacttataaccggagaatcgccaaccaaagttctgacgttaaa
ctcttgagaattggagaaggatttgtagaagcattgttgaactatatagattgggatgac
cggggtcaagcctttgctatgtggcgcactgatgcatcttgggacgcaaaagaaggtaag
gaatggttcggttttcaatacaactatatagtcgaggcaaatttaaaaattgctaaacaa
gttttaattgagaacaaactcgacagttctcaatacaaaattttgcagcgacgtgtagat
gcgctatttccaccaattatggaaaccatctatattgatggtcgccaagagccaatatct
gttgttgaagatcgagtgttgttggatatcttacaacgtccgtataaagatagaaacaat
aatcaacaacgagattacaatctagcaaaagaacgattagaaattattgacgattttgtc
gagcctagtaaatggcaaaattattgctatgaagtacgtaacgcttctttagcattactt
tctaatcgtcctgattttatcgaattgtgcgaaaaacgtagcttggttgctgagaagaaa
ttaagcaatagagtagagcaattacgcctgctgctgaatcagcaaagttgggatcaagca
ttagctgaagaactcaaaatagaaactgctttaagtgcagctattttagagggaattcgc
cgaccgcaaattaaacttgattctgtcggcttcattattgtatcagggcgatcgcttgcg
taa
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