Nostoc linckia: NIES25_56210
Help
Entry
NIES25_56210 CDS
T10227
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nlk Nostoc linckia
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nlk03016
]
NIES25_56210
Enzymes [BR:
nlk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NIES25_56210
Transfer RNA biogenesis [BR:
nlk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NIES25_56210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
HTH_RNase_II
CSD_RNase_II
KhtT_N
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BAY79138
LinkDB
All DBs
Position
plasmid1:398848..400908
Genome browser
AA seq
686 aa
AA seq
DB search
MEKGTLVEFRVQGDRRLGVVERPDGKTRWFVVDERGQSHSLAPRQVTYTFNKETYKPADI
PRFLELVKPYLDPSSLEVAWELLVEGGETITPEEMANLLFSESGAPHCYAAHCLLSDDKL
YFKQKGEAYEARTAAAVAERKHQIEVEALKAKGQQEFLARVEQALKGEAVEWQRHDRQRL
EGIEKYAALLADTVRMGVNYDTLGRAYPPSAPVLETMTLLGRPTTPQGAFQLLVDLAWWS
PHENLFLRRSSIPVQFPQKVLEVAQQRLDFPPIDSDTNRLDLTHLKVYTIDDETTTEIDD
GLSWEVLPDGRERLWVHIADPTRWLVPEDELDLEARKRGSTVYLPTGMIPMFPEILATGP
MSLVQGRICCALSFGVVLGATGAVEDYSIHTSLIKPTYRLTYEDVDEMLQLGVQAEPEIE
AIGTWANRRKTWRYAQGAISITMPEAAIKVKGDEINIDILDDSRSRQLVAEMMILAGEVA
ARYGQKHNIPLPFRGQPQPELPPDEELLQLPAGFVRACAMRRCMPKSEMSITPLRHAGLG
LDTYTQATSPIRRYSDLLTHFQLKAHLRGEILPFSGEQLKEVMMTVTTITQEVTMVERQT
NRYYALEYLRRHPEQIWNVTVLMWLREDSNLALILLEDLGLQLPMSFKRSVNLGEQILVK
VAHADPQKDMIQFQEIIYQEAQSAAN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaggggacgctagttgaatttagggttcaaggcgatcgtcgtctgggcgtcgta
gaacgtccggacggtaaaacccgctggtttgtggtggacgaacgcggtcaatcccacagc
ctcgcgcctagacaagtaacctatacgtttaacaaagagacttataagcctgcggatatt
cccaggtttctagagcttgtcaagccttatttagatccatctagcttggaagtagcttgg
gaattattggttgaaggtggggaaacaatcaccccagaggaaatggcgaatctgctattt
tcggaatcgggtgcgccccattgttacgctgcccattgcctgttatcagacgacaaactg
tatttcaagcaaaaaggagaggcttacgaagcccgaactgctgctgctgttgcagaacgc
aagcaccagatagaagtagaggcactcaaagctaagggacagcaggaatttttagctcgt
gtagagcaggcgctcaaaggtgaagcagtagagtggcagcgccacgatcgccagcgctta
gaagggatagaaaaatacgcagcgctgcttgcggacaccgtgcggatgggggtaaattat
gacactctgggtcgtgcttatcctccctcagccccagtattagaaactatgaccttgctg
ggacgccccacaacaccccaaggagcctttcaactattggtagatttggcatggtggagt
cctcatgaaaacttgttcctgcgtcgttcttcaattccggttcagtttcctcaaaaggta
ttagaagtggcgcaacaacgtttggatttcccacccattgactcagataccaaccgcttg
gatctgactcacctgaaggtctacaccattgatgatgaaaccaccacagaaatcgacgac
ggtttgagttgggaagtactccccgatggacgggaacggctgtgggtacatatcgccgat
cctactagatggttagtgccagaagatgaattagatttagaagccagaaaacgagggagt
acagtatatttacctacgggaatgattcccatgtttccagaaatcttggcaacagggcca
atgagtctggtacaggggcggatttgctgtgccttgagttttggagttgttttaggggca
actggagcagtagaagattacagcattcataccagcttaattaagccgacttaccgcctc
acctacgaagatgtagatgaaatgctgcaattaggggtacaagcagaaccagaaattgaa
gcgatcggcacttgggctaatcggcgcaaaacttggcgttatgcccaaggagcaattagc
atcaccatgcctgaggcagcaatcaaagtcaaaggcgacgaaatcaatattgacattttg
gacgattcacgctcccggcaactagtagcagaaatgatgattcttgccggtgaagttgct
gcccgctacggccaaaaacataacattcccttgccatttcgcggtcagccccaaccggaa
ttacctccagacgaagaattactccagttaccagccggatttgttcgcgcctgcgctatg
cggcgttgtatgcccaaaagtgaaatgagcattacgcctttgcgccatgcgggtttgggt
ttggatacctacacccaagcaacttctcccatccgtcgttacagcgatttgctaactcac
ttccaactcaaagcccatttacggggtgaaattttgccattttctggcgaacaactcaaa
gaagtgatgatgacagtcaccaccatcacccaagaagtgacgatggtagaacggcaaaca
aatagatattatgctctagagtatttgcgccgtcatccagagcaaatttggaatgtgacg
gtgttaatgtggctgcgggaagacagcaacttagccctaattttgttagaagatttgggt
ttgcagttaccaatgtctttcaaacgttctgtgaatttgggcgaacagatattagtaaag
gttgcccatgccgacccccaaaaagatatgattcagtttcaagaaataatttatcaagaa
gcccaatcagcagctaattaa
DBGET
integrated database retrieval system
