Nostoc linckia: NIES25_56520
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Entry
NIES25_56520 CDS
T10227
Name
(GenBank) methyl-accepting chemotaxis sensory transducer with phytochrome sensor
KO
K11525
methyl-accepting chemotaxis protein PixJ
Organism
nlk Nostoc linckia
Pathway
nlk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NIES25_56520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nlk02035
]
NIES25_56520
Bacterial motility proteins [BR:
nlk02035
]
Pilus system
Positive phototactic motility proteins
NIES25_56520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
MCPsignal
GAF_2
GAF_3
HAMP
Dicers_N
DUF5905
Motif
Other DBs
NCBI-ProteinID:
BAY79169
LinkDB
All DBs
Position
plasmid1:433906..437214
Genome browser
AA seq
1102 aa
AA seq
DB search
MTFLYHNNSENERLIPEVENQNGSPSVANIASNEISLLNAIAQEFKTWRRQLHDIAIHMR
QATDFNTLLKITVTQIREKIGCDRALIYQFNSLESGNVLAESRTLGWTPTLGENIPGIVF
GLYTNQDYLESVAIDDTSQIQLTPHQKQLLEKYQIKASLTLPILVEGKVWGLLAVNNCSS
PRQWQEGEISVLYQIARELTYRLHNFEFEKELQQQTQAKKSAAKVIDKILRISNVDKLFQ
ATTQEIRQLLKCDRVGVYRFRSDWSGEFVSESVGNNWVKMVGPDFNMVWEDTHLQETQGG
RYAKGETFVVKDIYQTGHAQCHIDILEQFQMMAYIIAPIFSGEKLWGLLAAYQNSGPRDW
QPWEESFLTQIGLQFGVAITQGEYLEQVQTKSEQLSQIIEQEKTVTKTVNRIRQSLDIES
VFKTTTQEVRQLLKCDRVVVFRFNPDWSGEFVAESVGNAWTKLVGPGIRTIWADTYMQEN
QGGRYTRGESFVAHDIYQVGHSPCHVEMLEQFEIRAYAIVPVFSGEKLWGLLAAYQNSGP
RDWQPWEANFLVQIGLQFGVAISQAEYMEQLRVKSQQLSQFAEQEKAVTKIVNRIRQSLD
IEEIFKIATHEVRQLLRCDRVGVYRFQPNWSGEFVAESVGHNWVKLVGPDIKTVWEDTHL
QETQGGRYAQGENFIVNDIYKVGHSPCHIEILEQFEVKAYAIVPVFIGEQLWGLLAAYQN
SAARDWEQSEVSLLARIGSQFGLALQQTEYLQQLQAQSTKLAEAAARDKAAKELLQQRSI
QLLTALRPALNGDLTVRAPITEDELGTIADAYNNTLQALRQIVLQVQVAAQKVAQTSSNS
DASLTELTNSAQHQSEELSAALGDIKQMVDSTQAVVANAQLVQVAVQQANQTVESGDTAM
NLTVKAIQGIRETVAQTSKKIKRLSESSQKISKVVNLIGNFATQTNVLALNAAIEATRAG
EYGKGFAVVADEVRSLSRQSAAATIEIEKLVQEIQTETGEVAVAMETGIQQVVEGTNLVS
ETRQNLNAIVSATAEISQLIERITAATQQQMTQSVTVTASMQDVAEIANKTFAESQEIAT
VFQELSGMAQELLTTASKFKVS
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgacattcttgtatcacaataactctgaaaacgagcgtttaattcctgaagtagaaaac
cagaatggtagccctagcgtagccaatattgctagcaacgaaatttctttattgaatgcg
atcgctcaagaatttaaaacttggcgtagacagttgcatgacattgcaattcatatgcga
caagctacggattttaatactttactcaaaattactgtaacacaaattagagaaaaaatt
ggctgcgatcgcgctttaatttatcagtttaattccttagaatcaggtaatgtattagca
gaatctcgaacgctagggtggacgccgactctgggggaaaatattcctgggattgttttt
ggtttatatactaatcaagactatttagagtctgtagctattgatgataccagtcagata
caactgacgccccatcaaaaacaactgctagaaaaatatcaaattaaagccagtttgact
ttaccaattttagtagaaggtaaagtttggggattattagcagtaaataattgctcctct
cctagacaatggcaagagggggaaattagcgtactgtatcaaattgctagagaattaacc
tacagattgcataactttgaatttgaaaaagaactgcaacagcaaacacaagccaagaaa
tcagcagctaaagtcatcgataagattttgcggatatcaaatgttgataaactttttcaa
gcaaccactcaagaaatccgccaattattaaaatgcgatcgcgtaggtgtttatcgcttt
agatctgactggagtggtgagtttgtctcggaatcagtgggcaataattgggtaaaaatg
gtaggccctgattttaatatggtttgggaagatactcacttgcaagaaacccaaggagga
cgttacgccaaaggtgaaacttttgtagttaaagacatttatcaaacgggacacgctcaa
tgtcacattgatattttagagcaattccaaatgatggcttatatcattgcacccatattt
tctggagaaaaattatggggcttactagcagcttatcaaaattctgggcctcgtgattgg
caaccttgggaagaaagctttttaactcagattggtttgcaatttggtgtggctattacc
caaggagaatatctcgaacaagtacagacaaaatccgagcaactttctcagataattgaa
caagaaaaaactgtaactaagacagtcaaccgcattcgacaatccttagatatagaaagc
gtttttaaaacaactactcaagaagtacggcaattattaaaatgcgatcgcgttgtagtt
tttcgctttaatcctgattggagtggtgaatttgtcgccgagtcagtaggtaatgcttgg
acaaaattggtaggccctggtattagaactatttgggcagatacctacatgcaagaaaac
cagggagggcgatataccagaggtgaaagctttgttgctcatgatatctatcaagtgggt
cattctccttgccatgttgagatgttagagcaatttgaaattagagcttatgcgatcgtt
cctgtattttctggagaaaagttatggggattattagcagcttatcaaaactccggccct
cgtgattggcaaccttgggaagccaactttttagtgcagattggcttgcagtttggtgta
gcaatatcacaagcagaatatatggaacaactgcgagtgaaatctcaacaattgtctcag
tttgccgaacaagagaaagcagtgaccaagatagttaaccgcattcgacaatctttagat
atagaagaaatatttaaaatagctactcatgaagtacggcaattattaagatgcgatcgc
gtcggtgtttatcgctttcaacctaactggagtggcgaatttgtagccgagtcagtaggc
cataattgggtaaaactcgtaggtcctgacatcaaaactgtttgggaagatacccattta
caagaaacccaaggaggtcgatatgcccaaggtgaaaactttatcgtcaatgacatctat
aaagtaggtcattctccttgccatattgaaattttagaacagtttgaagttaaagcttat
gcgatcgttcctgtatttataggggaacaattgtggggcttgctagcagcttatcaaaat
tccgcagctcgtgattgggaacaatcggaagtcagtttgttagcacgcattggcagccag
ttcgggctagcattacaacaaactgaatacttgcaacagctacaagcgcagtcaacaaaa
ttagcagaagcagcagcacgggacaaagcagctaaggaattactccaacaaagatcgatt
caacttctaacagcactcagaccagccctcaacggcgatttaacggtacgcgcaccgatt
acagaagatgaattaggcaccatcgcagacgcctacaacaataccctacaagcactacgg
caaatagttcttcaggtacaggtagcagcccaaaaagttgcccaaacttccagcaatagc
gatgcttcgctaacagaactgactaattcagcgcaacatcaatctgaagaacttagcgca
gctttgggtgacattaaacagatggttgactccactcaagctgtggtggcgaacgcccag
ttagtgcaagtagcagtacaacaagccaatcaaactgtagagtctggcgatacagcgatg
aacttaaccgtcaaagccattcaaggaattcgtgaaaccgtcgcccaaaccagcaaaaag
attaaacgtctgagtgaatcctcgcaaaaaatctccaaagtcgtgaatttgattggtaat
tttgccacacagacaaacgttttagctttgaatgcagccattgaagccacccgcgccggt
gaatatggcaaaggctttgcagttgtagctgatgaagtgcgttctctatctcgccagtca
gcagcagcaaccatcgaaattgaaaaattagtccaagagattcaaacagaaaccggggaa
gttgcagtcgcgatggaaactggtattcagcaggtagtggaaggcacaaatctggtaagt
gaaactcgccaaaacttaaatgcgatcgtttctgcaactgctgaaattagccaattaatc
gagcgaattaccgcagcaactcaacaacaaatgacccaatctgtaacagtcactgcatca
atgcaagatgttgccgaaattgccaataaaacttttgcagaatctcaagaaattgctact
gtctttcaagaattatcaggtatggcgcaagagttattaactactgcaagtaaattcaaa
gtcagctga
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