Nostoc linckia: NIES25_56820
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Entry
NIES25_56820 CDS
T10227
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
nlk Nostoc linckia
Pathway
nlk02010
ABC transporters
nlk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES25_56820
03070 Bacterial secretion system
NIES25_56820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlk02000
]
NIES25_56820
02044 Secretion system [BR:
nlk02044
]
NIES25_56820
Transporters [BR:
nlk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES25_56820
Secretion system [BR:
nlk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES25_56820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
cNMP_binding
AAA_22
ABC_ATPase
AAA_16
AAA_29
DUF87
AAA_23
AAA_21
AAA_30
KAP_NTPase
AAA_25
nSTAND1
RsgA_GTPase
PNMA_N
Zeta_toxin
AAA_18
AAA_15
Motif
Other DBs
NCBI-ProteinID:
BAY79198
LinkDB
All DBs
Position
plasmid1:complement(475214..478150)
Genome browser
AA seq
978 aa
AA seq
DB search
MTNTTAGIQEFIADLFPFNYLSPNVLENLLNQGQFFRYRIGQVIVAREAMPDQISVIYQG
QARLLGYNSQAPNPATLKLLSPGEVLGWISHVRGVACESAIASTEVITLNLPIAGFLPLL
KQESAFVKALQNEIALLEVYELLAEEFSRRADGSKNLVKLAQAATEVAIIRTIPARQAFH
QQLDSEFLWLVSSNFDSEFPAGSRLELEDINPKLKFKTNMRLVGLPKSILGKNPAVAAKT
LLPAEIPYASEITFTEESAPKSKQNKYPYIKGRGPLDASLACFQMLSQYFNIPLRRDTVR
RVLVKQHEQKGTMSLQFCAAVAELMGLTTQMVKVPAAAVGRLQLPVMISWQDSFAIIYKN
SDRELLIAVPEMGLLRYKLQDFAENWGAQGEVLLLQTNQNTPKSRFNLSWFVPSLRRYRK
VLIEVLIASIVIQLFGLVNPLATQVIIDKVLVGNSPDTLEVFGIFLLVVAIIEAILTSIR
THLFTDTTNRIDLTLGSEVINHLLRLPLSYFESRPVGELATRVRELENIRSFLTGTALTV
VMDAVFSVVYIVVMAVYSPVLTLVALATVPLFGLLNLMVSPLMRRQLQEKAECNADTQSY
LVEVMGGMQTVKAQNLEMRSRWQWQERYARYISASFKTVSTQTNAGSVSSFLNKFSSMLV
LWVGAFLVLNQQLTLGQLIAFRILAGYVTSPLLRLMQLWQNFQETALSLQRLADILDSPQ
ETETDSQNILMPTILGNVRFENLSFSFRDRGPLQLCNINLDFPAGSFVGIVGQSGSGKST
LLKLLPRLYEPKSGKILIDDYDISKVELYSLRRQIGMVLQDTLLFDGTVRENIALAYPDA
SDEEIITAAKVAYAHDFIMSLPSGYNTRVGERGSALSGGQRQRVAIARTVLQNPQLLILD
EATSALDYNAEAQVCRNLATAFQDKTVFFITHRLSTIRNAHIILMMDRGAVVERGTHEEL
MALKGYYYCLYQQQEANV
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatacaaccgctggtattcaagaatttattgctgatttgtttcctttcaattat
ctttcaccaaatgttttagaaaatttgctcaaccaaggacaattttttcgctatcgcatc
gggcaagtaatagtagccagggaagctatgccggatcaaattagcgttatctatcaaggg
caagcgcgtttattaggctataattcccaagcgccgaatccggccacattgaaattactt
tctccaggagaggttttaggttggataagtcatgtgcggggtgttgcttgtgaaagcgcg
atcgcttctactgaagttattaccctcaatctacccattgctggttttcttccattactc
aagcaagagtcggcttttgtcaaagcgttgcaaaatgaaattgctcttttagaagtatac
gaactgcttgcagaagaattcagccgtcgcgcagatggtagcaagaatttagttaaactt
gcccaggctgcaaccgaagttgcgattatccgcacaattcccgcacgccaagcctttcac
cagcagttagactcagaatttttatggttagtcagcagtaatttcgattctgagtttccc
gcaggtagccgcttagaattagaggatatcaaccccaagctgaaatttaagacaaatatg
cgtttggtgggattgcctaaatcaatacttggaaaaaatcccgccgttgcagcaaaaaca
cttttacccgcagagattccctacgcttcagaaattacttttacagaagaatcagcccct
aagagcaaacaaaacaagtatccatatattaagggtagagggccgctagatgcttccttg
gcttgcttccaaatgttgagccaatattttaatattcccttacgcagggatacagtgcgg
cgagtgttggtaaagcagcacgaacaaaaaggcacgatgtctctgcaattttgtgccgcc
gtcgctgagttgatgggtttgacaacacagatggtaaaagttccagccgccgcagttgga
cgcctgcaactacctgtgatgatttcttggcaagatagttttgctattatctacaaaaat
agcgatcgcgagttactgattgccgttccagagatgggactactgcgctacaaattacaa
gattttgctgaaaactggggcgcccaaggtgaagtactgctgttacaaactaatcaaaat
actcccaagtcacggtttaatttgagttggtttgtaccttcactacggcgctatcgcaaa
gtactaattgaagttctaatcgcttctattgttatccaactatttgggttggtaaatcct
ctggctacacaggtaattattgacaaagtattggttggtaacagtcctgataccttagaa
gtttttggcatctttttgctggtagtagcaattatcgaagccatacttaccagtatccgc
actcatttgtttacagatacaaccaacagaatcgacctcacccttggttctgaggtgatt
aatcatttgttgcgtctgccattatcttactttgagagccgtcctgtgggagaattggca
acgcgagttcgcgagttggaaaatattcgctctttcttgactggtacagctttgactgtg
gtgatggatgcagtattttcggtggtttacattgtagttatggcggtttatagcccagtg
ttgaccttggtagcattagcaacagtgccgctctttggcttgctcaacttgatggtatct
cctttgatgcggcgacaattgcaagagaaagccgagtgtaatgccgatacgcaatcttat
ttagtagaagtcatgggaggaatgcagacagtcaaggcgcaaaatttagaaatgcgatcg
cgttggcaatggcaagaacgctatgctcgttacatcagtgctagtttcaaaacagtctct
actcaaaccaacgctggttctgtcagcagtttccttaacaaattttccagtatgttagtg
ctgtgggtgggagcttttctcgtcctcaatcagcaacttaccttgggacaactcatcgct
ttccgcatccttgctggttatgttaccagtcccctgttgcgcctcatgcaactttggcag
aactttcaagaaaccgctttatctttgcaacgccttgctgatattttggacagtccccaa
gaaacagaaaccgacagccaaaatatcctcatgcccactattctaggtaatgtccgcttt
gaaaatctcagctttagtttccgcgatcgcggcccattgcaactatgcaatattaactta
gattttcccgctggctcctttgtgggaattgtcggccaaagcggttccggcaaaagtacg
ctgctaaaattattacccagactctacgaacccaaatccggcaaaatcttaattgatgac
tacgatatcagtaaagtcgaactctattccttacgccgtcaaattggtatggtgttacaa
gataccttactattcgatggtacagtccgtgaaaacattgctttggcgtatcctgatgct
agcgatgaagaaattattactgctgccaaggtagcttatgcccacgactttattatgtct
ttacccagcggttataacacccgtgtcggggagcgaggttcggcactatctgggggacaa
cgccaacgagtagcgatcgctcgtactgtcttgcaaaatccgcaattactcattctcgat
gaagctaccagcgccttagattacaatgccgaagcccaagtttgccgtaacttggcaaca
gccttccaagataaaacagtatttttcattactcaccgcctcagcacaattcgcaatgcc
catatcattctgatgatggatcgaggtgctgtggtagaacggggcactcatgaagaatta
atggcgctcaaaggttattactactgtctttatcagcaacaggaagcgaatgtgtag
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