Nostoc linckia: NIES25_57910
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Entry
NIES25_57910 CDS
T10227
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
nlk Nostoc linckia
Pathway
nlk00470
D-Amino acid metabolism
nlk00550
Peptidoglycan biosynthesis
nlk01100
Metabolic pathways
nlk01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NIES25_57910 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NIES25_57910 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NIES25_57910 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nlk01011
]
NIES25_57910 (ddlB)
Enzymes [BR:
nlk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NIES25_57910 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
nlk01011
]
Precursor biosynthesis
Amino acid ligase
NIES25_57910 (ddlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
GARS_A
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
BAY79307
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All DBs
Position
plasmid1:complement(629135..630118)
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AA seq
327 aa
AA seq
DB search
MGIFIGLCYDLKADYLKAGFSADEVMEFDDEETIIGLENALFELGHQVERIGNGRELALR
LAKGDRWNLVFNIAEGLKGRSREAQVPAVCELFAQPYTFSDPLTCALTLDKALAKRIIRD
RGLPTASFEVVNSTAQAQAISLPLPLFLKPVAEGSSKGITGRSFVKEREQLVTTYEFLRK
QFQQPVLVETFLPGRELTVGIIGNGSNSRVVGVMEVIFTDQAETSAYTTLNKDEYLERVA
YRLLIDPEPLAAQARQLALDVYHTLDCRDAARVDMRCDANGVLQFLEINPLPGLHHIRSD
LPIMGRLAGVSYTEIIAAIVESAWRRY
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgggaatatttattggtctttgttatgacctgaaagcagactacctgaaagctggtttt
agtgctgatgaagtgatggaatttgacgatgaagaaactatcattgggctagaaaatgca
ctatttgagttaggtcatcaagtcgaacgtattggaaatggtagagaacttgctcttagg
ttagcaaaaggcgatcgctggaatctggtttttaatattgctgagggtttgaaaggtcgt
tctcgcgaagcacaagttccagcagtctgtgaattattcgctcaaccttacaccttttcc
gatcctcttacctgcgccctcaccttagataaagcactagctaaaaggataatacgcgat
cgcggtttgcccacagcctcctttgaagtcgtgaattccaccgcccaagcacaagccata
tccttacctttgccattgttcctcaagcctgtcgctgagggcagttctaaaggaataacc
gggcgttccttcgttaaagaacgcgaacaactagtaacgacctacgaattcttacgcaaa
caattccagcaacccgtactagtggaaaccttccttcctggtcgagaattaacagtgggt
attattggcaacggtagtaattcgcgggtagtaggtgtaatggaagtaatttttacagac
caagcagaaacttctgcctacaccaccctcaacaaagatgaatatttggaacgggtagct
tatcgtttgctcatcgaccccgaaccactggcagcacaggcaagacagttggcgctggat
gtttaccatactcttgattgccgtgacgccgcccgcgtggatatgcgctgcgatgctaat
ggtgtgttgcagtttctggagatcaacccattgccaggactccaccatatccgctcagac
ttaccaattatgggacgtttggctggcgtgtcatatacagaaatcattgccgcaatagtt
gagtctgcttggcggaggtattga
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