Nostoc linckia: NIES25_61830
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Entry
NIES25_61830 CDS
T10227
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
nlk Nostoc linckia
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlk03400
]
NIES25_61830 (radA)
DNA repair and recombination proteins [BR:
nlk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NIES25_61830 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_16
DUF7125
nSTAND3
AAA_22
nSTAND_NTPase5
Lon_C
GvpD_P-loop
NTPase_1
AAA_14
ABC_tran
AAA
NACHT
zinc_ribbon_6
ATPase_2
AAA_24
DZR
MCM
AAA_29
TIP49
SLFN-g3_helicase
zf-RING_10
DUF7129
Motif
Other DBs
NCBI-ProteinID:
BAY79698
LinkDB
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Position
plasmid1:1109331..1110857
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AA seq
508 aa
AA seq
DB search
MAKPKSFYVCNDCGAESPQWFGKCPACGTYNSLEEQLLIQSSVDVPTRGGVSGWQAAANN
GKSNAKAPKQRASLTFDQISDRQVTRWESGYGELDRVLGGGVVPGSMVLIGGDPGIGKST
LLLQVSNQLAQRYRILYISGEESGQQIKLRASRLGVAKPLSVVGDGDEPVAENPVESQAP
ENVGADLYVLPETDLEEILREVDSLKPNVAVIDSIQTVFFPALTSAPGSVAQVRECTAAL
MKVAKHEDITMLIVGHVTKEGAIAGPKVLEHLVDTVLYFEGDRFASHRLLRTVKNRFGAT
HEIGIFEMVSHGLREVPNPSELFLGNRDDPAPGTAIVVACEGTRPIVVELQALVSPTSYP
SPRRAATGIDYNRLVQILAVLEKRVGIPMSKLDSYVASAGGLNVEEPAVDLGIAIAIVAS
FRDRIVDPGTVLIGEVGLGGQVRSVSQMELRLKEAAKLGFKRAIVPKGQKFPDLNIEILP
VSKVIDAIIAAIPHQELTTEDLEPDEYE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagccaaaaagtttttacgtttgtaacgattgtggggcggaatcccctcaatgg
tttggtaagtgtccagcctgtggtacttacaattcgctagaagaacaactcctgatccaa
tcttctgtagatgtacctactcgtggaggagtaagtggttggcaagccgcagccaataat
ggcaaatctaatgctaaagctcctaaacagcgggcttcactgacatttgaccaaattagc
gatcgccaagtcactcgttgggagtctggttatggagaattagatcgggtattaggtggt
ggagttgttcctggttcgatggtgttaattggcggcgacccaggaattggaaaatctact
ttattactgcaagtatcaaatcaattggcgcaaagataccgcatcctttatatttctgga
gaagaatcaggacaacaaataaaattaagagcttctcggttaggagtagcaaaacctcta
agtgttgttggtgatggcgatgagccagtagcagaaaatcccgtcgaatcgcaagcacca
gaaaacgtaggagcggatttatatgtattgccagaaacagatttagaagagattttgcgg
gaagtagattcactcaaaccgaatgtagctgtaatcgatagtattcaaacagtgttcttt
cccgccttgacttccgcgcctggttctgtagctcaggtacgcgaatgtactgcggctttg
atgaaggtggcgaagcacgaagatattaccatgttgattgtgggacacgtcaccaaagaa
ggagcgatcgccgggccgaaagtcttagaacatttagtagatacagtgttgtattttgaa
ggcgatcgctttgcctcccatcggttattacgcacagtcaaaaatcgctttggggcaaca
catgaaatcggcatctttgaaatggtgtcacacggactgcgggaagttcccaacccctca
gagttatttttaggcaatcgtgacgacccagcgccaggtacagcaattgtagttgcttgt
gaaggtactcgccccatcgttgtggaattgcaagcccttgtgagtcccaccagctacccc
tcacctcgacgtgcagccaccggcatagactacaaccgcctcgtgcaaattctcgccgtc
ttagaaaaacgtgtcgggattcctatgtcgaaattagattcttatgttgcttctgctggc
ggattgaatgtagaagaaccagcagtagatttaggaatagcaattgccattgttgctagt
ttccgcgatcgcatcgttgacccaggtacagtattgatcggtgaagttggcttaggcgga
caagtgcgatcggtttcccaaatggaactgcggttaaaagaagcagctaaattgggattt
aaaagagcgatcgtacccaagggacaaaaattccctgacctaaatattgagattttacca
gtatctaaagtaatagatgcaattatcgctgccatcccccatcaagaactgacaaccgaa
gatttagaacccgatgaatatgagtaa
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