Neisseria leonii: ORY85_03135
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Entry
ORY85_03135 CDS
T10281
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
nln Neisseria leonii
Pathway
nln02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nln00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ORY85_03135 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nln03021
]
ORY85_03135 (rpoD)
Transcription machinery [BR:
nln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ORY85_03135 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
MitMem_reg
GTP_EFTU
SH3_17
Motif
Other DBs
NCBI-ProteinID:
WWV75399
LinkDB
All DBs
Position
654835..656760
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AA seq
641 aa
AA seq
DB search
MNTNDYDEQDDNRPLTPEEQRARLRQLIIQGKERGYITYAEINDALPDDMSDAEQIDNIV
NMIQGLGIQVTEETPDAETLLMSDSGTGMTDDDAVEEAEAALSNADSEFGRTTDPVRMYM
REMGQVDLLTRDDEIIIAKKIENALKNMVQAISACPGSIAEILALIEQVRNDEIKVDEVV
EAIIDPNELLLNELGLGHLESSSDTPGEADNTDDDDAEADDDDGSGDIESTNLEELKANV
LAHFSGVQAEYDLMVAALTEHDSRHPSYLQHRDTIAGKLLEVRFATRQIESLSNNLRRRV
DHIRKLEREIRDICLERVQMDREYFLSQFLPNITDMTWVPQEIGKNRIWGNALERFQYAI
IEKQAALAEMEASSQISIDELKDINKNMVVSEKETAAAKQEMIQANLRLVISIAKKYTNR
GLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMI
ETINKMNRISRQELQKTGEEPDSARLAELMEIPEDKIRKIMKIAKEPISMETPIGDDDDS
HLGDFIEDINNIAPADAAMYSSLREVTKDVLESLTPREAKVLRMRFGIDMNTDHTLEEVG
KQFDVTRERIRQIEAKALRKLRHPTRSDRLKSFLDSDDHKQ
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaacgactacgacgagcaagacgacaaccgcccgctgacacccgaagaacag
cgtgcccgcctgcgccagctgattatccagggtaaagagcgcggctacatcacttatgcc
gaaatcaacgatgctctgcccgacgatatgtccgatgccgaacagatcgacaacatcgtc
aatatgattcagggcttgggcattcaggttaccgaagaaacacccgatgccgaaaccctg
ctgatgagcgacagcggcacaggcatgaccgatgacgacgcagtggaagaagccgaagcc
gccctctccaatgccgactccgaattcggccgcaccaccgatcctgtgcgcatgtatatg
cgcgagatgggtcaagtcgatctgctgacccgcgacgacgaaatcatcattgccaaaaaa
atcgaaaatgccctaaaaaacatggttcaggccatttccgcctgccccgggtcgattgcc
gaaattctcgcgctgatcgagcaggtacgcaacgatgaaatcaaagtcgatgaagtagtc
gaagccatcatcgatcccaacgagctgctgctcaacgaattgggattgggacatctcgaa
agcagcagcgacaccccgggcgaagcagataataccgacgacgatgatgcagaagccgac
gatgacgacggcagcggcgacatcgaaagcaccaatctggaagagctgaaagccaatgtg
ctggcacacttttccggcgtgcaggccgaatacgatctgatggtggccgccctgaccgaa
cacgacagccgccatccgtcctacctgcaacaccgcgacaccatcgcaggcaaactgctg
gaagtacgctttgccacccgccagatcgaaagcctgagcaacaatctgcgccggcgtgtc
gaccatatccgcaagctcgagcgcgaaatccgcgacatttgtctggaacgcgtccaaatg
gaccgggaatactttctgtcccaattcctgcccaatatcaccgacatgacgtgggtgccg
caggaaatcggcaaaaaccgcatctggggcaatgccttggagcgtttccaatacgccatt
atcgaaaaacaggccgcattggcagaaatggaagcctcgtcgcagatttcgattgacgaa
ctcaaagacatcaacaaaaacatggtcgtcagcgaaaaagaaaccgctgccgccaaacag
gaaatgattcaggccaaccttcgtctggtcatttccatcgccaaaaaatacaccaaccgc
ggcctgcaatttctcgatctgattcaggagggcaacatcggcctgatgaaagcggtggac
aaattcgaataccggcgcggctataaattctccacctacgccacttggtggatccgtcag
gccattacccgatcgattgccgatcaggcgcgcaccatccgcattccggtacacatgatt
gaaaccatcaacaaaatgaaccgcatttcacgccaggaattgcagaaaaccggcgaagag
cctgattctgccagactggccgaactgatggaaattccggaagacaaaatccgcaaaatc
atgaaaatcgccaaagaaccgatttcgatggaaaccccgatcggcgacgacgacgattct
catctgggcgactttatcgaagacatcaacaacatcgcaccggccgatgccgccatgtat
tccagcctgcgcgaagtgaccaaagacgtgctcgaaagcctgaccccgcgcgaagccaaa
gtattgcgcatgcgtttcggtatcgatatgaacaccgatcatacgctggaagaagtcggc
aaacagtttgacgttacccgcgaacggatccgccaaatcgaagccaaagccttgcgcaaa
ctgcgccaccccacccgcagcgaccgcttgaagagctttctcgacagcgacgaccataag
cagtaa
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