Neisseria leonii: ORY85_06640
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Entry
ORY85_06640 CDS
T10281
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
nln Neisseria leonii
Pathway
nln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ORY85_06640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nln03019
]
ORY85_06640
03009 Ribosome biogenesis [BR:
nln03009
]
ORY85_06640
Enzymes [BR:
nln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ORY85_06640
Messenger RNA biogenesis [BR:
nln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ORY85_06640
Ribosome biogenesis [BR:
nln03009
]
Prokaryotic type
rRNA processing factors
ORY85_06640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Zn_ribbon_InsA
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
WWV74128
LinkDB
All DBs
Position
1378068..1380842
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AA seq
924 aa
AA seq
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MKRMLFNATQAEELRVAIVDGQTLLDLDIETLGKEQRKGNIYKGVITRIEPSLEACFVDY
GTDRHGFLPFKEVSRSYFQDYDGGRARIQDVLKEGMQVIVQVEKDERGNKGAALTTFISL
AGRYLVLMPNNPRGGGVSRRIEGEERQELKEAMAQLDVPRGMSLIARTAGIGRSVEELQW
DFNYLLQLWQAIEAAGQAHSEPYLLFMESSLLIRAIRDYYRPDIGEILVDNPEVHQEVAE
FMSYVMPGNVGRLKLYQDHTPLFSRFQIEHQIESAFARSVSLPSGGAIVIDHTEALVSID
VNSARATRGADIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVL
RDALKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHIACPRCAGTGVIRSIESTALHV
LRIIQEEAMKDNTGEVHAQVPVDVATFLLNEKRAELFGLEERLDVSVFLIPNIHLENPHY
EITRVRTDDIEENGEPSYKRVEVPPADENDKPFGGEKAKAARPEPAVKGLRHSQPAPVSE
TPAAPGWWQNLKNWFKGLFAAPEAAPAKPERKADGKPRQNGGRRNPQNRRRNSRHSKAQE
ADATAETPTGAAGDENRNGNRRKRHDASEQRNGSERHNERRSRNSETAAEDETLNNTPLT
AVQNGQDDTAAATQPRRRPSRRQENRTPQETALPLAAETETVSDDAAPEAEQPQSDTANA
ETKPKRERSRSGSQRERNRRNDKKRHIPSAEKIEQYLMIDEAGDKVRAAVAHVYGETVAE
NRPAADDMPSDGPLIITLPAAEEAAQTPGTADSSEPLVVTLSPIENEADDAVQPEAEAHP
APEPADEDEPQPAKRKRAPKAKPKKAETVLPEGMVMVQTRTDAVAAADVPQPSQAKGLRR
SDVPRRETAAAEPAEMVQVETHNG
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttattcaatgccacgcaggccgaagagctgcgcgtggcgattgtggac
gggcagaccctgctcgatctcgacatcgaaacgctgggcaaagaacagcgcaaaggcaat
atctataaaggcgtgatcacacgcatcgaaccctccctcgaagcctgcttcgtcgattac
ggcaccgaccgccacggctttctgccgttcaaagaagtctcccgcagctatttccaagac
tacgacggcggccgcgcccgcattcaggacgtactcaaagaaggtatgcaggttatcgtg
caggtggaaaaagacgaacgcggcaacaaaggcgcggcactcaccacctttatcagcctg
gccggacgctacctcgtcctgatgccgaacaacccgcgcggcggcggcgtatcgcgccgc
atcgagggcgaagaacgtcaggaactcaaagaagcgatggcgcagcttgatgtaccgcgc
ggcatgagcctgattgcgcgcaccgccggcatcggccgcagcgtggaagagctgcaatgg
gatttcaactatctgctgcaactgtggcaggccatcgaggcagcgggccaagcccacagc
gaaccctacctgctgtttatggaaagttccctgcttatccgcgccatccgcgactactac
cgccccgacatcggcgaaattctggtcgataatcccgaggtacatcaggaagtggccgaa
tttatgagttatgtgatgcccggcaacgtcggccgtctgaaactctatcaggaccacaca
ccgctgttttcccgcttccaaatcgaacatcagattgaaagtgcgttcgcgcgcagcgtc
agcctgccctccggcggcgccattgtcatcgaccacaccgaagcactggtttccatcgac
gtcaactccgcccgcgccacacgcggtgccgacattgaagacaccgcgttcaaaaccaat
atggaagcggccgaagaagtcgcccgccaaatgcgcctgcgcgacttgggcggtctggtg
gtcatcgacttcatcgatatggaaaaccccaaacaccagcgcgatgtggaaaacgtactg
cgcgacgcgctgaaaaaagaccgcgcgcgcgttcagatgggcaaactttcccgcttcggc
ctgctcgaactctcccgccagcggttaaaacccgcgctgggcgaaagcagccacatcgcc
tgcccgcgctgtgccggcaccggcgtgatccgcagcatcgaatccaccgccctgcacgtt
ttgcgcatcattcaggaagaggcgatgaaagacaacaccggcgaagtgcacgcacaggtg
ccggtcgatgtcgccaccttcctgctgaacgaaaaacgcgccgaactgttcggactcgaa
gaacgtttggacgtttccgttttcctgattccgaatatccatttggaaaacccgcattac
gaaatcacccgggtgcgtaccgacgacatcgaagaaaacggcgaaccgagctacaaacgc
gtggaagtaccgccggccgatgaaaacgacaaacctttcggcggcgaaaaagccaaagcc
gcacggccggaaccggccgtcaaaggcctgcgccacagccagcccgccccggttagcgaa
acacccgccgccccgggctggtggcagaacctgaaaaactggtttaaaggcctgtttgcc
gcacccgaggccgcaccggccaagcccgaacgcaaagcagacggcaagccccgccaaaat
ggcggacggcgcaatccgcaaaaccgccgccggaacagccgccacagcaaagcgcaggaa
gcggacgccacagccgaaaccccaaccggggcggccggagacgaaaaccgcaacggcaac
cgccgcaaacgccatgacgcttccgaacagcgcaacggcagcgaacgccacaacgaacgc
cgcagccgcaacagcgaaacggcagccgaagacgaaaccctgaataacactccgttaacg
gcggttcaaaacgggcaagacgacaccgcagccgcaacacagccgcgccgccgcccgtcc
cgccgtcaggaaaaccgcacgccccaagaaacagcactgccgcttgccgccgaaacggaa
acggtatccgatgatgccgcgccggaggcagaacagccgcaaagcgatacggcaaatgcg
gaaaccaagcccaaacgtgagcgcagccgtagcggcagccagcgcgagcgcaaccgccgc
aacgataaaaaacgccatattccgtcggcagaaaaaatcgagcagtatctgatgattgac
gaagcgggcgacaaagtgcgcgcggccgttgcccatgtttacggcgaaaccgttgcggaa
aaccgccctgccgcagacgatatgccctcagacgggccgctgattattaccctgcccgcc
gccgaagaagcggcacaaaccccgggtacggccgacagcagcgagccgctggtggtcacg
ctcagcccgattgaaaacgaagcagacgatgcggtacagcccgaagcagaggcccacccc
gcacccgagcctgccgatgaagacgaaccgcagcctgccaagcgcaagcgcgcgcccaaa
gcgaaaccgaaaaaggcggaaaccgtgctgcccgaaggcatggtgatggttcaaacccga
accgatgccgtggccgctgccgatgtcccgcagccgtcgcaggcaaaaggtttgcgccgt
tccgatgtgccgcgccgtgaaacggcagccgccgaacctgccgaaatggtgcaggtggaa
acgcacaacggctga
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