Neodiprion lecontei (redheaded pine sawfly): 107216716
Help
Entry
107216716 CDS
T09006
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107216716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107216716
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107216716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
Zfx_Zfy_act
AAA_22
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
107216716
NCBI-ProteinID:
XP_046589163
LinkDB
All DBs
Position
2:2639888..2645211
Genome browser
AA seq
691 aa
AA seq
DB search
MSRHRNVRSMNYSDEYDGYDDVYGHSVEDDYCVSPSVSILAEQFLFDRNKQHNISSYITE
DDIVEEDETQEETPLPPSYKRPELSVLDATKLESCIEAIKNVVGDSIPESTLTENILKHN
LNSEAALDAILATTSSNNASEKPAINQNNEDLLQGKKLTAKPAVPVLLSSPAVKVIPSAT
RSVIKGFDISGTDGDFLNTTVESPRSQSPFSGQTSPDIRRKDIKTVSSKSNTPRCQSPAV
EQDNKSKLNSKKLDAISLFKNLRGDIKEQLHLVVVGHVDAGKSTLLGRLLCDLGQVSSKL
LHKFQTESKKIGKQSFAYAWVLDETGEERERGITMDVGHSKFETATKTITLLDAPGHKDF
IPNMIMGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVINKLDTV
DWSKDRYDEIVEKMRVFLKQAGFRDAVPFVPCSGLSGENLVSKSKEEGLIKWYNGPTLTE
VIDQFKCPKRPVDQPFRFSVNDIYKGTGSGFCVSGHVETGMISTSDKVLVLPHNEVASVR
GLQIDEMPVTNGFAGDHLVFTLTGIDQQIIAVGDLLCDPQHLVPVTTRFEAHIVIFAVAM
PITRGLPVVMHHQSLVEPVVLKKLIAQLHKSSGEVIKKKPRCLPKNSSAIVEIETQRPIC
MELYRDVKQLGRIMLRVGGSTIAAGLVTKIY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacacagaaacgtccgttctatgaattactctgatgagtatgatggatatgat
gatgtttatgggcattccgttgaagatgattattgcgtttctccaagtgtttcaatttta
gcggaacaattcttatttgaccgaaacaagcagcataacatttcttcatacattacggaa
gatgacatagtggaggaagatgaaactcaagaggagaccccattgcccccgagctataaa
aggccggaactctcagttcttgatgcaacaaaactagagtcctgcatcgaagctataaaa
aatgttgtcggtgactctatccctgagtccacactcacggaaaatattctcaagcataac
cttaactcagaagctgcacttgatgctatacttgctactacgtcgtcaaacaatgcatct
gaaaagccagccatcaatcaaaacaatgaggatcttcttcaaggtaaaaaactaaccgct
aaaccagcagtacctgtgctactatcctcccctgctgtaaaagtaattccatcagcgaca
cggtcggtcatcaaaggcttcgacattagtggaacagacggagatttccttaacacaaca
gttgagagtccgagatctcaaagtccattctccgggcaaacctcacctgatattcgaaga
aaagacattaaaacagtttcatcaaaatcaaacaccccaagatgtcagtccccagcagta
gaacaagataacaaatcgaaattaaatagtaaaaaattggatgcgatcagcctgttcaag
aatcttcgtggagacataaaggagcagttgcacttggtagtcgtcggccatgttgatgcc
ggaaagagcacattactgggtagactgctctgcgatctaggacaggtgtcttcaaaatta
ttacacaaatttcaaactgaaagcaagaagattggcaagcaatcgtttgcatatgcatgg
gtgcttgatgaaactggcgaagaaagggaacgtggtatcacaatggacgttggccactcc
aaatttgaaaccgctactaaaactattacacttttggatgccccaggtcacaaagacttt
attccaaacatgattatgggtgcgacccaagccgacgtggctcttctagttgttgatgct
acgagaggagaatttgaaactggttttgacagcggtggacaaacaagagaacacgctttg
cttttacgctctctcggtgtctctcagctggcagtagtaataaacaaattggataccgtt
gactggtccaaggatagatacgatgaaatagttgaaaagatgagagttttccttaagcag
gctggttttcgagacgctgtaccatttgtaccatgtagcggtttgtccggggaaaattta
gtctccaaatccaaggaggaaggactgattaaatggtacaacggacccaccttgaccgaa
gttatcgatcaattcaaatgtccaaaacgacctgttgaccaacccttcaggttttcggtg
aatgacatttacaagggaactggctcaggattttgtgtatcgggacatgttgagactggg
atgatttctacgagtgataaggtgttagtactacctcacaacgaagtcgcttctgtccga
ggcttacagatagacgagatgcctgtaacaaatgggtttgccggcgaccatcttgtcttc
acattgacagggatagatcagcagattatagctgttggcgacttgttgtgtgatccccag
cacctggtcccagttacgactcgattcgaagcgcacatagtaatatttgctgtagcgatg
ccgattactcgtggccttccagtagtaatgcatcaccaatcgctcgtggagccagtggtg
ttaaagaaactcattgctcagctccacaaaagttctggggaagtgataaaaaaaaaacct
cgatgtctgcccaaaaattctagcgctatcgttgaaatagaaactcagagacctatttgc
atggaattatacagagatgttaagcaacttggcagaattatgctgcgtgtgggtggttct
actatagctgctggtttggttactaagatatactaa
DBGET
integrated database retrieval system
