Neodiprion lecontei (redheaded pine sawfly): 107217049
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Entry
107217049 CDS
T09006
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo04137
Mitophagy - animal
nlo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107217049
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107217049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nlo04121
]
107217049
Enzymes [BR:
nlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
107217049
Ubiquitin system [BR:
nlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107217049
Multi subunit type E3
ERAD complex
107217049
LMBR1L-GP78-UBAC2 complex
107217049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_11
CUE
zf-RING_5
zf-RING_16
zf-ANAPC11
G2BR
Prok-RING_4
zf_RING_Vps8
zf-C3HC4_4
RING_XB3-XBAT31
DUF6924
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
107217049
NCBI-ProteinID:
XP_046585889
LinkDB
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Position
1:complement(39767712..39795694)
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AA seq
616 aa
AA seq
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MPMVFLDRLPVPSLRAYTSISIAILSCSIYYAAQIVKDPGWRNNHPNSLVAAVGNATDNN
ASAIVDSRTLGVHMRELFACMVQEPGCIWTLINMAYCVLILVGKSIQKLVFGELRVSERQ
HLKDKFWNFVFYKFIFVFGVLNVQYMDEVVLWCAWFTALGFLSLLSQLCKDRFEYLSFSP
TTPGWSHVRLLGLLTAILALSSFMLLMCVAAGFFFVSFNTFAFMAAECILLGVRTIHVML
RYAIHLYDTRGAGNTSPRSWDKRGPLAYYTELTSELTILAVDFLHHVHMLLWSNIFLSMA
SLVICMQLRYLFHEIQRRITKHRNYLAVLSHMEQNYPMASQEELAENSDNCAICWEKMET
ARKLPCGHLFHNSCLQSWLEQDTSCPTCRLALSMQANHRENAPEIPSESPTPARRNDNHF
FHFDGSRYVSWLPSFSVEVTHNRIRGDISALAHTNSQLDAMARQVQQLFPYYPRNVILED
LRGTRSIEITIENILDSRLLPPHHVIEEPEAEPATTTQTTTAHILPIPLVQDTLDPRLDI
PAADSGEEPSNLGGRFSKSSMERERILQRRKEHMLLTARRKYFERHPHHNESDTSLDVSS
PVNLNNVTPRISLSHN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggtttttctcgaccgcttgccggtcccgagcttacgcgcttacacctcgata
agcatcgcgatattgtcctgttcgatttactacgctgcacaaatcgtcaaggatccagga
tggcggaacaatcatccgaactccttggtcgccgctgtgggaaacgccaccgacaacaat
gcatcggccattgtcgattccaggaccctcggtgttcacatgagggaactttttgcctgc
atggttcaggagccgggatgcatatggacgctgataaacatggcgtactgcgttttgata
ctcgtcggtaaatctatccagaaattggttttcggcgagcttcgagtttccgaacgacag
caccttaaggataaattttggaacttcgttttctacaagttcatattcgtcttcggtgta
ctcaacgtccagtacatggacgaggtcgtgctttggtgcgcctggtttacggctcttgga
tttttgagcctgctgagtcagttgtgcaaggatcgtttcgaatatctctccttctcgccg
acgactcccggctggagtcacgtccgacttttgggcctccttaccgccatcctggctctt
tcgtcattcatgttgttgatgtgcgtcgcggctggttttttcttcgtatctttcaacacg
tttgcttttatggcagccgagtgcattctattgggagtgagaacgatccacgttatgcta
cgctatgcgatacatctgtacgacacccgaggagctggtaatacatcgccacgttcctgg
gataagcgaggtccgctagcctattacacagaattaacttcggaacttaccatactggcc
gtagacttccttcaccacgttcacatgctgctttggagtaatatattcctgagcatggct
tctcttgttatttgtatgcagctcagatatctattccacgaaattcaacggcgtataaca
aagcatagaaattatcttgctgtgcttagtcacatggaacaaaactatccgatggcgtcg
caagaggaactagcagagaattccgacaactgtgctatttgctgggagaaaatggaaact
gctcgaaaactgccttgcggacatttgtttcacaactcgtgtctacagtcttggttagag
caggacacttcttgtcccacgtgcagattggccctgagtatgcaggccaatcacagggaa
aacgctcctgaaataccctccgagtcccccacacctgcacgtcgtaacgataatcacttc
ttccacttcgacggatccagatacgtctcctggctgcccagcttctccgtcgaggtcacc
cacaacaggatcagaggcgatatttctgccttggcgcacaccaactcacagcttgatgct
atggccagacaagtccaacaattgtttccctattatcctcgcaacgtgattctcgaggac
ttgagagggactcgatcgatcgaaatcacaattgaaaacattctggacagcagacttttg
cccccgcaccacgttattgaggaaccggaagcggagcctgcgactacgacgcaaaccacg
acggctcatatcttgcccattcctttggtccaggacaccttggatccgagactcgatata
ccagccgctgatagcggagaagagccgtctaatcttggcggacgattctcgaaatcgtca
atggaaagggaaaggatcctgcagcgtaggaaagagcacatgcttctgacggctcgtcgg
aaatactttgagagacatccgcatcataacgagtctgatacatcgttggacgtttcatca
ccggtgaatctgaacaacgttacgccgaggataagtctttctcataactga
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