Neodiprion lecontei (redheaded pine sawfly): 107217229
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Entry
107217229 CDS
T09006
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03083
Polycomb repressive complex
nlo04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107217229
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
107217229
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nlo01009
]
107217229
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlo03036
]
107217229
03029 Mitochondrial biogenesis [BR:
nlo03029
]
107217229
Protein phosphatases and associated proteins [BR:
nlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107217229
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
107217229
HMT complexes
COMPASS/SET1 complex
107217229
MLL-HCF complex
107217229
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
107217229
Mitochondrial biogenesis [BR:
nlo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
107217229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
107217229
NCBI-ProteinID:
XP_046598154
UniProt:
A0ABM3GD07
LinkDB
All DBs
Position
5:35976204..35983647
Genome browser
AA seq
1575 aa
AA seq
DB search
MAAPMLKWKRITNPTGPQPRPRHGHRAVALKDLMVVFGGGNEGIVDELHVFNTATNQWFV
PSTKGDIPPGCAAYGFVVDGTRILVFGGMVEYGKYSNELYELQASRWEWKRLKPKPPKQE
QPPCPRLGHSFTLIGNRIFLFGGLANDSDDPKNNIPRYLNDLYTLELLGNGVTAWDVPQT
HGNSPPPRESHTGVAYADRTTGKSCLVIYGGMSGCRLGDLWFLDIDTMTWNKPLVHGPTP
LPRSLHTATLIGHRMYVFGGWVPLVVDDVKVATHEKEWKCTSTLACLNLETLTWEQLTVD
SLEENVPRARAGHCAVAVHSRLYVWSGRDGYRKAWNNQVRVCCKDLWYLEVKKPPSPSRV
QLVRASTQSLEVSWAATPSAQYYILQIQKYDMPPTTGTFPAAAAPVSAPTAAPVPVAAAV
PAPATVSSPQIPPVVTPVPSTPPIVRQQAPSQTPVRIQTAVQQSPGQKTIQTPVMAKQGS
PMTPRVTGNLIRIRSPLVTTVTPTTDQGASPGTTSASQSPTTAMSGIQALAAAAAATQKI
SMNNVQILPQPGNTIRMKNMQPGQQIRFAAPGATVLRTASPQQSKQIILQKPGQNITGQP
QIVHLLKAGQGMVAAVPKVSLIQGKTVQTAGSKPLNQGPTILRLVNPNTVAGSKVLTTVK
TSNLVAMSKGQSISGKQTIMITKPGGNGGLVGRTNQIIVVTTGSGLRAVQAVTTSQAGSG
QPGNLSTPVNVLPLSATNHVTNQQGVKMIVVSSGAMGGGTAGKPITITVPGQGGVPKTVT
IATKGNQQTLFNPTKNQIVAVPQMQKTPEAVTVSGKPVTLQMSSGIGTKTVTLMPSSSSI
VTTAGTSEIIDTSKMIFVPSQKQPSASLASTSDGPATTDAALAALAAEAGLIDPVQESSG
GLSFMVSADETGAVDGKGDSCNGNESAVLASQLGSGEPLQVDNDGNFIIPQVDGPADDLM
EDGEGGGEEEETAATENEPETNEPTEPHPENDSNEAEQHTNSVTADLKLRLQEAVPEDSS
KDPQLDTETSKTPPTSAEPLSTELDATTNSENPEAQIKLEGTEESEENSEQQEQLPNESA
ETEASLPAEDINMKTEDVSLPLDEKILESEGEADNSQDEQNSGKDISNEQHQLEAISMSV
DQSDSDNVSQADSQPAVDDATSQDSQTSQDDIDRKKVDDEPESESLRLNLENPLSPENIK
AKDEPMETESEFLMASKTPIPSPTTAAPTISPKSEPQESQDEPMNEDEDDAVSEPSPIAT
KPSTATNVTTNGIASTVKRPVPVAILKNEPKDEKDATPTSGDSTALTTLATAALGSAGQA
VKVKAEMLRFQTEEEKKDADWYDVGVIKGTTFTVQHYYLPGDEPLNTSQPLPADVFKGRT
KIFLEPGTAYKFRVAAVNSCGQSGWSEVSAFKTCLPGFPGAPSAIKISKSAEGAQLSWEP
PPSNLGPILEYSVYLAVRSASAVSNSAGEATTVATTPTQLAFIRVYCGPTNACSVPNSSL
SAAHVDTTTKPAIIFRIAARNDKGYGPATQVRWLQDPTTAVKSNPQLKRPVADARPQVNS
PQKKFKTDTGTENFS
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacccatgttaaagtggaaacgaatcacaaatccgaccgggcctcagccaaga
ccgagacatgggcatcgggcggtcgctcttaaagacctcatggtcgtcttcggcggtggt
aacgagggaattgttgacgaactccacgtattcaatacagcaacaaaccaatggtttgtt
ccatcgacaaagggagatatacctcccggttgtgctgcctatgggttcgtggtggatggg
acccgaattttggtattcggtggtatggtagaatatggaaagtattccaacgaattatat
gagctccaggctagtagatgggagtggaagcgattgaaaccaaaaccacccaaacaggaa
caaccaccgtgcccgcgactgggtcacagcttcacactgatcggcaacagaatattctta
tttggaggattggcaaacgacagtgatgatcctaagaataatattccaagatatttgaat
gacctgtatactctggagttacttggcaatggtgtaacagcatgggatgtaccacaaact
catggaaactcgccgccgccaagagaatcgcacactggtgtagcttacgcagatcgcaca
actgggaaatcatgtctagttatatatgggggaatgagcgggtgcagactgggggatctg
tggtttttggacatagacacaatgacttggaacaagccattagtccacgggccgacgcca
ctacctcgctctctgcatactgctactttgatcgggcatcgaatgtatgtctttggtggt
tgggtaccactggtcgttgacgacgtcaaggtagcaacccacgagaaggaatggaaatgc
acaagcacattggcatgcctaaatttagaaacattaacgtgggaacaattgaccgtcgat
tcactggaagaaaatgtgccgagagccagagcaggccattgtgctgtcgcagtccatagt
cgtctatacgtttggtcgggtagagacggatatcgcaaagcttggaacaaccaggttagg
gtatgctgtaaagatttgtggtacttggaagttaagaaaccaccatctccgtccagagtg
caattggttcgagcttcgactcagtccctagaagttagttgggccgccacaccttctgct
caatactacatcttgcaaatacagaaatatgatatgccaccaacaacgggtactttccca
gcagctgcagctcctgttagcgcgcctacagctgctcctgttccggttgcagcagccgtt
ccggcgcctgctactgtatcatctccacagataccaccagtggtcacgccagttccttcc
accccaccaatcgtccggcagcaagcaccatcccagacacctgtacgaattcaaacggct
gtgcaacaaagtccggggcaaaagacaatccaaactccagttatggcaaaacaaggaagt
ccaatgactccaagagtcactgggaatcttatccgcattcgttcaccgcttgttacaact
gtaactcccacaacggatcagggagcctcacctggcacaacttctgccagtcaatctccg
accaccgcaatgtccggcatacaagctttagctgctgcagctgccgcaacgcaaaagatc
agcatgaacaatgtgcaaatacttccacaacctggcaacaccattagaatgaaaaacatg
cagcctggtcagcaaatacgatttgctgcaccaggagcaacggtattaaggactgcctca
ccacagcagagcaaacagataatcctccaaaaaccaggacaaaacataactgggcagcca
caaattgttcacctcctcaaagccggacagggaatggtcgcggcagtaccaaaagttagt
ttaattcaaggaaaaaccgtgcaaacggcaggatcaaagcctcttaatcaaggaccaaca
attcttagattggttaatcccaacactgtggctggctcaaaggttcttacgacagtaaaa
acttcgaatttagttgcaatgagcaaaggacaaagtatttccggaaaacagactatcatg
attacaaaacctggcgggaatggcgggctggttggcagaaccaaccagattattgtcgtc
accactggctcaggtctgagagctgttcaggctgttacaacctctcaggccggctctggc
caacctggaaacctaagcacaccagttaacgtacttcctttatcagcgacaaatcatgta
accaatcagcaaggtgttaaaatgattgttgtatcatctggtgccatgggtggtgggact
gctgggaagcctatcaccataacggtacctggccaagggggagtaccaaagactgttaca
attgctacaaaaggaaatcaacagacactcttcaatccaacgaaaaatcaaattgtcgca
gttccacaaatgcaaaaaacaccagaggctgttaccgtttctggtaaacctgtaacgttg
caaatgtccagcggcattggtaccaaaactgtcactctgatgcctagcagcagctcgatt
gtgaccactgctggaacatcagaaatcatcgatacgagcaaaatgatttttgtaccctca
caaaaacaaccatcagcctcgctggcttcaacatctgatggtccagcaacgactgatgct
gcgctagcagctctagccgcagaggctggattgattgatcctgttcaagaatcctctgga
ggcttatcgttcatggtatctgcagatgagactggagcggtagatggcaagggggacagt
tgtaacgggaatgaatcagctgttttagcgtcacaacttgggtctggggagccactacaa
gttgacaacgatgggaactttattatcccccaagttgatggtcctgctgatgatttaatg
gaagatggagaggggggaggagaagaagaagaaacagcagcaacagaaaatgaacctgaa
acgaatgagcccaccgaaccacaccctgaaaatgattccaatgaagctgaacagcatacg
aattctgttacagccgacttaaagctacggcttcaagaagctgtacctgaagatagtagt
aaggatccacaactggacactgaaacttcaaagactccaccaacttctgcagaacctctt
tcaacagaactggatgcaacaacgaattcagaaaatccggaagctcagataaaacttgag
ggaactgaggagtctgaggagaatagtgaacaacaggaacagttaccaaacgaaagtgca
gaaactgaggctagcctaccagctgaggatataaatatgaaaacagaagacgtaagcctg
cctttagatgaaaaaattcttgaatcagaaggggaagcagacaattctcaagacgaacaa
aattctggaaaagacattagcaatgaacaacatcagcttgaagctatcagtatgtcggta
gatcagtcggattcagacaatgtttcgcaagcagattcacagcctgctgtagatgacgca
acatctcaggattcgcagacatcccaggatgacattgatcggaaaaaagtggatgacgaa
cctgaaagtgaatcacttagattaaatttggagaatcctttatcaccagaaaatatcaag
gccaaggatgagccaatggaaactgaatcggaatttttaatggcatccaagactcctatt
ccttccccgacgaccgccgctcctacaatttcaccaaaatcagagccacaagagtcacag
gacgaaccaatgaatgaagacgaagatgatgcagtatctgagccttcgccaattgctaca
aaaccatctaccgccacaaatgttacaacaaatggcattgcctcaactgttaagaggcca
gtaccagtggcaattttgaaaaatgaacccaaagatgaaaaggatgctacacctacaagt
ggtgactcgactgctcttactactttggctactgcagcgttaggctctgctggacaagca
gtcaaagtcaaagctgaaatgttacgtttccagactgaagaagaaaagaaggatgccgac
tggtatgatgtcggagtgataaagggaacaacttttacagtccagcattactatttgcct
ggggatgagcccctaaatacatcccaacccctgccagcggatgtatttaaaggacgtacg
aaaatcttccttgaacctggcaccgcatacaagtttagagttgctgctgtgaatagctgt
ggtcaaagtggttggagtgaggtgtccgcattcaagacttgtctgcctggttttccgggt
gcgcctagcgccataaaaatatcaaagtctgcggaaggagctcagctatcttgggaacca
ccgccaagtaacttggggccgatactcgagtactcagtttacttggcagtgagaagtgcc
agtgctgtttcaaacagcgctggagaagccaccactgttgctacaacgcctacacagctt
gcgttcatcagagtctattgcggccctactaatgcctgttccgtacctaacagttcgctg
agtgctgctcacgtcgatacgacgactaaaccagcgattatatttagaatagctgcgcgc
aatgataaggggtatggaccagcgacgcaagtcaggtggctgcaagatccaaccactgca
gttaagagtaatcctcaacttaaaaggccagtcgcagacgcacgtcctcaagttaattct
cctcagaagaaattcaagacagataccggaaccgaaaatttctcgtga
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integrated database retrieval system
