Neodiprion lecontei (redheaded pine sawfly): 107217327
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Entry
107217327 CDS
T09006
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107217327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlo03036
]
107217327
03400 DNA repair and recombination proteins [BR:
nlo03400
]
107217327
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107217327
DNA repair and recombination proteins [BR:
nlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
107217327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_14
Motif
Other DBs
NCBI-GeneID:
107217327
NCBI-ProteinID:
XP_015510313
UniProt:
A0A6J0B9H8
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Position
5:complement(3244088..3249705)
Genome browser
AA seq
1206 aa
AA seq
DB search
MSSAMESSEIHPNIEDKSARNDRNGDLQDDSILRRIITVRPETSVLAEISHQIEASLTTK
DTLVDTRKASLVSDKAELANQVRSGEITPFQAASVRAAQKPKNGGTFNKTTQLLDLEQYI
FQQAELARRKATEPCSKKRPLTNKEKDKNLCKKQKLSNNPKSKYVQKRTKFKEPEIMKRG
DLENKVAIHQSNQASAVAEAMNNSLPRNTRRFMVDVECKNKPLKNKAGPSTGVDNIEAAD
YSDTCKEDSESGSEYLPSDEQPDSGDDSKRSLAKKSVRNIKTKSGYNRLFLDDGNEWIYR
QRVESSGFPKEKEYHKVDNLFKVPMSVWKRLYKYQKVSVQWLWELHGRNLGGLLGDEMGL
GKTVQLIAFLAGLDCSELLLDGGRFRGLGPSLIICPATLLEQWVKHFHEWWPTLRVATLH
HMGTHKGDPELLVRSLKCGGILVTSYTGVLTHKELLLNMEWHYIILDEGHKIRNPEAKVT
KVVKGFSTPHRLILTGSPMQNSLRELWSLFDFILPGKLGTLPAFMEHFAAPITRGGYTNA
SSLQEATALNVATMLNDAITPYMLRRTKSDVQHHVSLPEKNEQVLFCSLTDEQRALYNGY
LRSEDVSYILHERSNSGDSGRYRARLLIALTALRKICNHPDLYLYDNKMDPNEYHSNEEE
VIDVDVENFGYWKRAGKMAVVRSLLKIWKKQGHRVLLFTQSRQMLAVIETLVQHENYSYL
RMDGTTPMSQRQQDVCKFNKDTSYFVFILTTRVGGLGINLTGANRVVIYDPDWNPATDAQ
ARERAWRIGQVKNVTIYRLITAGTIEEKIYHRQIFKQLLSNKVLEDPRQRRLFRTSDLTE
LFSLNEPIGNDQTESEKLFHHSKLSLGSPSFSSDKVEAMRKLAAKLSKSICEKTKTLGSG
VNNKTTETCSSSINRKKSTDRGNRSPINVKTKSSAKNCNYLEITSTDAESIKPMEDDHDL
SLVNDTSGVGEKELDHAADAIKLEPIDPDEIHQPIILDDKINIEIENNIELLDKTVPDIN
ENGSHIQSSTVELSVNNIENDCNIQSPSELNGSTESKVKSQMSREYEIVNHRTDEVEPIG
DNDKGHKPKHESRHKKKRSQNRKSRRISSLFEGERVSCLIGRRFGHQKIDEPIPSDDNYV
LQKLFAKSKVSTAFQHDSILSGVRNDNATVMQRQAQKAAQESMELLRQSRKWCWRPTWNK
TPCRDG
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgcaatggaaagcagcgagatacatccgaatattgaagataagtcagctagg
aacgatcggaatggcgatcttcaggacgactctatacttcgcaggatcattacggtacgt
ccggaaacgagcgtcctggctgagatctcacaccaaattgaagcttcacttactacgaag
gatacacttgtcgacacaaggaaagcatctttagtatcagataaggctgaactagctaat
caggttcggtcgggagaaatcactccttttcaagctgcatctgttagagctgcacaaaaa
ccaaaaaatggaggtactttcaacaaaacgacccagctattggatttggaacagtatata
tttcaacaagctgagcttgccagacgcaaggcaacagagccatgctctaaaaagcgccct
ctaactaacaaagagaaagataaaaatttatgcaagaagcaaaaactttcaaacaatcct
aagtccaagtatgttcaaaaaaggacaaaattcaaagaacctgaaattatgaaaagaggc
gacttagagaacaaagtagctattcaccagtccaatcaggccagtgctgtagcagaagcc
atgaataattcattaccacgaaatacaagaagatttatggtcgatgtggaatgcaaaaac
aagcctttaaaaaacaaagctggtccatccactggagttgacaatattgaagctgcagac
tattctgatacttgtaaagaggattccgagtctggaagcgaatacttaccaagtgatgag
cagccagactctggtgacgattctaaaagatctttagcaaagaaaagtgttcgcaatata
aaaacaaaatctggttacaacagattatttttggatgacggcaatgaatggatttaccgc
caaagagttgagagcagcggattcccaaaagaaaaagagtatcataaggtcgataatctg
tttaaagttcccatgtctgtttggaaaagactatacaagtatcaaaaggtttctgtacag
tggttatgggaattacatgggcgaaacttgggtggcttgctaggcgatgagatgggctta
ggaaaaacagtacagcttattgccttcctggctggactagattgtagcgagttattgtta
gatggtggaagatttcgaggactgggaccctcactcataatttgtccagctacgctcttg
gaacagtgggttaaacacttccatgagtggtggccaacattgagagttgcaaccttacat
cacatgggaactcacaaaggtgatcccgagcttttggtgcgaagcctgaaatgcggagga
atactggtaacgtcctataccggtgttctaacccacaaagagttgttactcaacatggaa
tggcattatataattcttgacgaaggtcacaaaatacgaaatccagaggctaaggtgaca
aaagttgttaaaggattttccacccctcatcgtctgatcctaactgggagtcccatgcaa
aactcattgagggaattatggtcacttttcgatttcatattgccaggtaaactgggtaca
ttacctgcctttatggagcattttgcagctccaattacccgaggtggttacacaaatgct
tcttcccttcaggaagctactgcactaaacgtggctacaatgttgaatgatgctatcact
ccttatatgctaagaagaacaaaaagtgacgttcagcatcatgtcagcttacctgaaaaa
aacgaacaggtcttattctgcagtttgacggacgagcaacgagcattatacaatggttac
ttaagatcggaagatgtttcatacatcttgcatgagcgtagcaattccggggatagcggt
agatacagggcgcggctacttattgccttgacagcactcagaaaaatatgcaatcatccg
gatctctatctgtacgataataaaatggatccaaatgaataccattcaaatgaagaagaa
gtgatcgacgtcgatgtagaaaattttggatactggaagcgtgctggaaaaatggctgtt
gtacgctctttactcaagatatggaagaaacaggggcacagagtattacttttcacacag
agtagacagatgcttgctgtcatagaaactctggttcagcatgagaattattcatattta
cgaatggatggtactacgccaatgtctcagaggcaacaagatgtttgcaaattcaataaa
gacacttcgtatttcgtatttattctaaccacacgagtcggaggtttgggaataaattta
acaggagcaaatcgtgttgtcatttatgatcctgattggaatcccgcaactgatgcacag
gccagagaacgtgcctggagaataggtcaggtgaaaaatgttaccatttacagactaatt
actgctggcaccatagaagaaaagatttatcaccgccaaatattcaagcaactgctttcc
aacaaagtgttggaagatccccgccagcgcagattgttccggacgtcagatctcacagag
ttattctcattgaatgaaccaattgggaatgatcaaactgaatcggaaaaattatttcac
cattccaagttatcactaggcagtccaagcttctcttcagacaaagtagaagcaatgcga
aagttggctgccaagctgagtaagagtatttgcgaaaagaccaagactttgggcagtgga
gtcaacaataaaacgactgaaacctgttccagtagtatcaatagaaaaaaaagtactgac
aggggaaatcgatcacctataaacgtgaaaacgaaaagcagcgcaaagaattgtaactat
cttgagattactagtacggatgccgaaagtataaaacctatggaagacgatcatgattta
tctttggtaaatgatacgagtggagttggagaaaaagaactggaccatgctgctgatgca
ataaaattggagccaattgatcctgatgaaattcatcaaccaataatactggatgacaaa
attaatatcgaaattgaaaacaacattgagttattagataaaacagtgcctgacataaat
gaaaatggctcacatatacaatcatcaaccgtagaactttctgtgaataatatcgaaaat
gattgtaatattcaatcaccttcagaactcaacggaagtactgaatctaaagtgaaatcg
cagatgagtcgagaatatgaaattgtaaatcaccggacagacgaggttgagcctattggt
gataatgacaaaggacataaaccaaagcatgagtcaaggcacaagaaaaaacgttcacag
aatagaaagagtcgtagaatctcatcgctatttgagggagaacgcgtctcttgtcttatt
ggaagacgctttggacatcaaaaaattgacgagcctataccttcagacgataactacgtc
ttacaaaaattatttgcaaaatcaaaggtcagcacggcgtttcaacacgacagcatctta
tcaggtgtacgcaatgacaatgcaactgtaatgcaacgccaggcccagaaggctgctcaa
gagagcatggagttattgcgacagtcacgaaaatggtgttggagacccacgtggaacaaa
acaccctgtcgtgatggctga
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