Neodiprion lecontei (redheaded pine sawfly): 107217331
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Entry
107217331 CDS
T09006
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03030
DNA replication
nlo03410
Base excision repair
nlo03420
Nucleotide excision repair
nlo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107217331
03410 Base excision repair
107217331
03420 Nucleotide excision repair
107217331
03430 Mismatch repair
107217331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlo03032
]
107217331
03036 Chromosome and associated proteins [BR:
nlo03036
]
107217331
03400 DNA repair and recombination proteins [BR:
nlo03400
]
107217331
DNA replication proteins [BR:
nlo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107217331
DNA Replication Termination Factors
ELG1-RFC complex
107217331
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107217331
DNA repair and recombination proteins [BR:
nlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107217331
Check point factors
HRAD17(Rad24)-RFC complex
107217331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
RCF1-5-like_lid
AAA_lid_RFC1
nSTAND_NTPase5
AAA_16
Mg_chelatase
Rad17
AAA_11
Viral_helicase1
RuvB_N
AAA_19
nSTAND3
AAA_assoc_2
AAA_24
AAA_18
MeaB
ABC_tran
AAA_5
IstB_IS21
NTPase_1
DNAX_ATPase_lid
MipZ
AAA_29
RNA_helicase
AAA_28
AAA_23
AAA_25
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
107217331
NCBI-ProteinID:
XP_015510314
UniProt:
A0A6J0B5J0
LinkDB
All DBs
Position
5:complement(5450589..5470630)
Genome browser
AA seq
350 aa
AA seq
DB search
MAGTDENGEPMDVEVVPSTSGINQKSKSSYRAAHLPWVEKYRPQVFSDIVGNEDTVARLS
VFAQNGNAPNIIIAGPPGVGKTTTILCLARVLLGPAFKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPQGRHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNNSEKIIEPI
QSRCAMLRYGKLSDAQVLAKIIQVCEKENASYTDDGLEAIVFTAQGDMRQALNNLQSTHN
GFGHVNGENVFKVCDEPHPLHVKEMLELCSKGNIDKSFGIMSHLWRMGYSAEDIIGNIFR
VCKNLDIDEKMKLDFIKEIGLTHLGIVNGMNSLLQMQSLLARLCRIALKK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaccgacgaaaacggcgagccgatggacgttgaggtcgtgccgtcaaccagc
ggcataaatcagaagagtaagtcgagttacagagccgcgcatttgccgtgggtggaaaag
tatcgtccccaagtgttttcagacatagtgggcaacgaggacactgttgcacggttgtct
gtttttgcccagaacggtaatgcgccgaatataatcatcgccgggccgcctggagtggga
aagacgacgaccatcctctgtttagctcgggttcttcttggaccagctttcaaggatgct
gttcttgagctcaacgcgtctaacgacagaggaatcgacgtcgtgcgaaacaagatcaag
atgtttgcccagcaaaaggtcacccttcctcaaggcaggcacaagataatcatactcgac
gaagcggacagcatgaccgacggtgctcaacaagccctacgccgaaccatggagatctac
agcaacaccaccaggttcgcgctcgcttgtaacaacagcgagaaaatcatcgaacccata
cagtcgcgatgcgctatgttgcggtatggaaaactgtccgatgcccaagtcttggccaaa
atcattcaagtctgcgaaaaggagaatgcgtcttataccgacgatggattggaagcaatt
gtgttcactgcccaaggagacatgagacaagcattgaacaatttgcagtcgactcacaat
ggattcggacatgtgaacggagaaaacgtgttcaaggtttgcgacgaaccgcatcccctt
cacgttaaagaaatgcttgaattatgctcgaagggaaacattgataaatcatttgggata
atgtcgcatttatggaggatgggatactctgctgaggatattattggaaacatattcaga
gtctgcaaaaatctcgatatagatgagaaaatgaagcttgatttcatcaaggaaatcggt
ttgacgcatttaggcatcgttaatggaatgaacagtctacttcaaatgcagagtcttttg
gcccgtctgtgccgaatagctcttaaaaagtaa
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