Neodiprion lecontei (redheaded pine sawfly): 107217368
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Entry
107217368 CDS
T09006
Name
(RefSeq) ATP-dependent RNA helicase bel
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107217368
03041 Spliceosome [BR:
nlo03041
]
107217368
03036 Chromosome and associated proteins [BR:
nlo03036
]
107217368
Enzymes [BR:
nlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107217368
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107217368
mRNA cycle factors
Common to processing body (P body) and stress granule
107217368
Spliceosome [BR:
nlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107217368
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107217368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Motif
Other DBs
NCBI-GeneID:
107217368
NCBI-ProteinID:
XP_015510358
UniProt:
A0A6J0B9L7
LinkDB
All DBs
Position
4:26106520..26117125
Genome browser
AA seq
720 aa
AA seq
DB search
MSNAANQNGSGLEQQFAGLDLQNSRQPSGGRYVPPHLRNKSGGPAPLGGDTNSPPSNSRQ
PSDRDRGGDRDRERGRGGGGGRDGGSGYRDSRGGGRDIDFGNFGGRNRRGGNQENGGGRD
QRYPTNDNRDGGPGGGNDRWQEQQPRNDRWQESRNDNRSSGNGGGRWKDSEGGGGREGGR
DGGRGRNEVDWTIPTTRDEKLEVELFGTGNTGINFSKYEDIPVEATGDNIPPHITCFDEV
QLTEIVKNSIALAGYDKPTPVQKYAIPIIIGRRDVMACAQTGSGKTAAFLVPILNQIYEC
GPRPPPPNAVGANFGRRKQYPLGLVLAPTRELATQIYDEARKFAYRSRMRPAVVYGGANV
SDQLRELDRGCHLLVATPGRLVDMLNRGKIGLHNCRYLVLDEADRMLDMGFEPQIRRIVE
QDTMPPTGERQTLMFSATFPKEIQMLARDFLNNYIFLAVGRVGSTSENITQKIVWVDEGE
KRSYLLDLLQANNLTQPSAESLTLVFVETKKGADTLEEYLHQAGYPVTSIHGDRTQRERE
DALRRFRAGSAPILVATAVAARGLDIPHVKHVINFDLPGDVEEYVHRIGRTGRMGNLGVA
TSFFNSKNHNLVRELVQLLIEANQDLPPWLENMSMEVRNSGGGGGARRPGSTKSGGRFAS
AFGARDYRQQPGAGSARNNGAGRPGSYGGGYGGYGGSYNNSSYNTSSNNGGGGTDWWTGK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgcagccaaccagaatggatcaggtctagagcagcagtttgctggtctggac
ttgcagaactcccgccagccaagtgggggtcgctacgtaccacctcatctccgcaataag
tccggaggtcctgcgccattaggcggtgatacaaattcaccacccagcaactcgaggcaa
cctagcgacagagacaggggaggtgacagagatcgggaacgtggtagaggaggtggcgga
ggccgtgacggcggctctggctacagagattcccgtgggggtggacgtgacattgatttt
ggtaactttggaggtcgaaatcgtcgtggtggcaatcaagagaacgggggagggcgtgat
cagcgctacccgaccaacgacaaccgagatggtggtccaggtggcggcaacgaccgttgg
caggaacagcaacctcgaaatgaccgctggcaagagtccagaaatgataacagatcgagt
ggcaatggaggtggaagatggaaagatagcgagggtggcggcggacgcgagggtggcagg
gatggcggaagaggacgaaatgaagttgactggacaatcccaacaacgagggatgagaag
ttggaggtggaattgtttggaacaggaaatactggaatcaatttcagcaagtatgaggat
attcccgttgaggccaccggcgataacatacctccacacatcacatgcttcgatgaagta
cagctgacggagattgtaaagaacagcatcgctcttgctggttacgataagccaacgccg
gtccaaaagtatgcgattccgatcatcatcgggcgtcgcgacgtcatggcctgcgcgcag
accggatctggtaaaactgcggcatttttagtgccgatattaaatcagatctacgaatgc
ggtccccgacctcccccacctaacgctgtcggcgccaactttggaaggcgcaaacaatac
cctctgggtctagtcttggctcccaccagagaactggctacccagatatatgatgaagcg
cgcaagtttgcttacagatcaagaatgcgtcctgctgttgtttatggcggtgccaatgtt
agcgatcagttacgcgaacttgatcgcggctgccaccttcttgtcgccacacctggtcgt
ctcgtcgacatgcttaatcgcgggaaaattggtctacacaattgccggtacctagtacta
gacgaggcggatcgaatgcttgacatgggtttcgagccgcaaattcgtcgcatagtagaa
caagatacaatgcctccaaccggggaacgacagacccttatgttctctgccacttttccc
aaagagattcagatgctagctcgtgactttctgaacaattatattttcttggcagtcggc
agggttggttctacgtctgaaaacatcacccagaagatagtttgggttgatgaaggtgaa
aaacgatcttatcttcttgatctactccaagccaacaacctaactcagcctagtgcggaa
tcactcacactagtattcgttgaaacaaaaaaaggagctgacacgctagaggaatacttg
caccaagcaggctatcccgtgactagtatccacggtgatagaactcagcgtgagcgtgaa
gatgcgttgcgccgtttccgcgctggatcagcacctattctcgtcgcgacagctgtcgcg
gcacgaggtcttgatattccgcatgttaaacatgtaatcaattttgacttgcccggcgat
gtcgaagagtatgtccatcgtattggtcgtaccggacgtatggggaatctaggcgtagcc
acttcattcttcaatagtaaaaaccataatttagtaagagagcttgtccagcttctgata
gaggccaaccaggatttacctccgtggttagagaatatgtccatggaagtacgaaactct
ggaggtggtggtggtgcacgaagaccaggtagtactaagagcggtggtcgttttgccagt
gcttttggggcaagagattatcgtcaacagcctggtgctggatctgcacgaaacaacgga
gccggacgacctggaagttatggcggtggatacggaggatacggaggcagctacaacaac
tcatcgtacaatacctcatccaacaacggtggcggtggcacagactggtggaccggcaag
tag
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