Neodiprion lecontei (redheaded pine sawfly): 107217488
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Entry
107217488 CDS
T09006
Name
(RefSeq) protein strawberry notch isoform X4
KO
K26273
protein strawberry notch
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlo03036
]
107217488
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107217488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
107217488
NCBI-ProteinID:
XP_015510528
UniProt:
A0A6J0BA21
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Position
3:24994203..25010504
Genome browser
AA seq
1380 aa
AA seq
DB search
MPRPKRTSTKRYKAEEVSEDSSAGSGSDFDDDEDPDKIEVPGGGKDLATAAGIGGIKEEK
PLVPAPLLKGHGGVSILNQKFANKLPGGLVTKSNAAPGYEMLRVGGSQGTPAFMGIGGMG
PVGQMAANNPYAFPPSLASLAGYNPAALFQHSKSPSAMEMSNMMGMGSLMGLGSMAGLNP
FMLQQFLTQNGMHPNWSGGLSGKAVSQLWMNSGDPGKMNMQPTLPEEEEVDDEDMGVAET
YADYMPTKLKLGRKHPDPVVETASLSSVEPTDVWYKVVIPEEIIRSGALSALQLESITYA
SQQHEHLLPDGTRAGFLIGDGAGVGKGRTIAGIIFENYLRGRKRAIWVSVSNDLKYDAER
DLKDIGAGKIEVHPLNKFKYAKISSAVNSNVKKGVIFSTYSALIGESSQSGGKYKSRLKQ
LLQWCGEDFDGLIVFDECHRAKNLCPTGSSKPTKTGLTVLELQNKLPKARVVYASATGAS
EPRNMAYMVRCGMWGEGTPFPEFTDFIAAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHG
VAFKIEEVPLSKEFTKVYDTSVKLWVEAMQKFQEAAELIDAENRMKKTMWGQFWSSHQRF
FKYLCIAAKVKHAVAVAREAVKCGKCVVIGLQSTGEARTLEQLERDDGELSDFVSTAKGV
LQTLVEKHFPAPDRNRIHRLLGLEPPKSGKSHNGDFEEAGGSTGKRKPVRQAAQRASKKV
KTWSTDDDVSEDDRNGGGRSSGSEFKLSGTESEDDNRSDDESNASSDFNPFYSDSDSDAD
PWDRRKKKGKKHKKSPKKRLSTQDKIQSMLASKTSHNKNKRNGESGMGMPGMGLSMSQAP
PRDAIERACCIKEELLAQIESLGDKLPPNTLDQLIDELGGPENVAEMTGRKGRVVQTEDG
AIQYESRSEVDVPLETLNLTEKQRFMDGEKTVAIISEAASSGISLQSDRRARNQMRRVHI
TLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISDLAGERRFASIVAKRLESLGALTHGD
RRATETRDLSQFNIDNKYGRAALEATMKTIMGYESPLVPPPQDYKGDFFKDVADALVGVG
LICNSESMPGVLTLDKDYNNMSKFLNRILGMPVDLQNRLFKYFTDTLNAIVTQAKKTGRF
DMGILDLGTSGENVKRVKLYRFLRKHATGIAPTELHIVHVERGMSWAEAMDRWESLTGSK
EGFYLSHQVRNGKQTAILAVAVESGKKKGENRKDHLYTVYRPNTGLQLRQETLGELEKKY
KKVETEEAEPHWTQQYDASVDTCSHAYWRGNCKNTTLGLDCEVGLRRRSYNVLAGSVLSV
WSRVENVLATRSGHNSKMQVVRLRTDESLKIVGTLIPKSCMEALREALSSDAEKTEEQTF
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggccgaaacgaacctcgacaaagaggtataaagctgaagaagtcagcgaagac
agcagtgcaggtagtggcagtgattttgatgacgatgaggatccagataaaatagaagta
ccaggtggtggaaaagatctggcgacagctgcaggcattggcggaattaaagaggagaaa
ccattggttccagctcccttgctcaagggacatggcggagttagcatactcaaccaaaaa
tttgcaaataaactaccgggtggtctagttacaaaaagcaacgccgctccgggctacgag
atgcttcgtgtcggtgggtctcaggggacaccggccttcatgggtataggtggaatgggg
ccggttggacaaatggctgctaataatccctatgcatttccaccgagtcttgctagttta
gcaggttacaatcccgctgccctttttcaacatagtaagtcaccttctgcaatggaaatg
agcaatatgatgggaatgggtagtctaatgggccttggatctatggctggtctaaaccca
tttatgctgcaacaattcctaacccaaaacggaatgcatccaaattggtctggaggattg
tcaggtaaagccgtatctcaattgtggatgaattccggtgatccgggaaaaatgaacatg
cagccgacactgccagaagaagaagaagtagatgatgaagatatgggtgtagcagaaacc
tacgcagattacatgccaacaaaattaaaactaggccgaaagcatcctgatcctgttgtg
gaaacagcttcattatctagcgtggagccgacagatgtgtggtataaagttgtcatccct
gaagagattattcggtccggcgccttgtccgcgttgcaattagaatcgataacatatgca
tcgcagcagcacgagcacttattaccagatggtacaagagctggttttctcataggagat
ggagctggagtaggaaaaggtcgaacaatagctggaataatatttgaaaattatttaaga
ggtagaaaacgggcgatctgggtatctgtttctaatgatttgaaatatgatgcggaacga
gacttgaaagacataggcgcaggaaaaattgaagtgcatccattgaataaatttaaatat
gcgaagatatcgtcggccgtgaattcaaacgttaagaaaggtgttatattcagtacttac
tcagccctcatcggcgaatcttctcaaagtgggggtaaatacaaaagccgactgaagcag
ctattacagtggtgtggcgaagactttgatgggttaattgtgtttgatgagtgtcacaga
gcgaaaaatctctgtcctactggtagttcaaaaccaacaaaaactggccttacggtatta
gaacttcaaaacaaattgcctaaggcacgtgttgtatacgcttccgcgacgggtgcgtcg
gaaccaaggaatatggcttacatggtgagatgtggtatgtggggggaagggacacctttt
ccggaattcactgacttcatcgctgctgtagaaaaaagaggtgttggcgctatggaaatt
gtagctatggacatgaagctgagaggaatgtatatagccagacagctcagctttcacggt
gtggcattcaaaattgaagaagttcctttatccaaagaatttacaaaagtgtacgacact
tctgtgaaactgtgggttgaagctatgcagaaatttcaagaggctgctgaacttattgat
gccgaaaacaggatgaaaaaaacaatgtggggacaattctggtcttcgcatcaaagattt
ttcaagtatctttgtatagctgctaaagttaaacatgcggtagcagttgctcgtgaagca
gtgaaatgtggcaaatgtgtcgtgataggtctacaatctactggagaagcccgtacctta
gaacaactagagagagatgatggagaactcagtgactttgtctcaacagccaagggagtt
cttcaaacgctggtggaaaaacacttcccagcacctgatcgaaatcgaatacatcgatta
cttggtcttgagccgccgaaatccggcaaatctcataatggggactttgaggaagcagga
ggttcaacaggaaaacgcaaaccagtgcgtcaagctgcacagagagcatcgaaaaaggtt
aagacatggtctaccgatgatgatgtgtctgaggatgacagaaatggcggtggtcggagt
tctggatcggagtttaaactctctggaactgaaagtgaagatgataatcgtagcgacgat
gaaagtaacgctagttctgactttaatcccttctacagtgacagtgattctgatgcagat
ccgtgggaccggaggaaaaaaaaggggaagaagcacaaaaaatcaccgaaaaaacgtcta
agtacgcaagataaaattcagtcgatgcttgcaagtaaaacatcacataacaaaaataaa
cggaacggtgagagtggtatgggaatgcctggaatgggcctctcaatgtcgcaagctcca
ccacgtgatgctatagagcgtgcttgttgcattaaggaagaattactggctcagatcgaa
tctcttggtgacaaattacctccaaatacactggatcaacttatcgatgaattaggcgga
cctgaaaacgttgcagaaatgacaggcagaaaaggtcgagttgtgcagactgaggatggt
gcgattcagtatgaatctcggtcggaagtagatgttccattagaaactttaaatttaaca
gaaaaacaaaggtttatggatggcgaaaaaacggtagcgatcatctccgaggccgcgagc
agtggtatttctttgcaaagcgataggcgggctagaaatcaaatgcgaagagtacatata
actctagaactgccatggagtgccgacagagctatccaacaatttggaagaactcacaga
tccaatcaagtcaatgctccagaatacatttttctcatatccgacttagctggagaacga
aggttcgcttcaatcgtagcaaaacgtttagaaagcttgggggctttaacacacggtgat
cgacgagctacagaaacaagagatttgtcacagttcaatattgataacaaatatggtagg
gctgcattagaagccactatgaaaacaataatgggttatgaaagcccactggttccacca
ccgcaagattacaaaggagacttctttaaagacgttgcagatgccttggttggggttgga
ctaatttgtaacagtgagagcatgccaggcgtcttgaccttagacaaagattacaataat
atgtccaaatttctgaacagaattttaggaatgcccgtcgatttacaaaatagacttttt
aagtacttcaccgacacgttgaatgcgatagtgactcaggcgaagaaaaccggtcgtttt
gatatggggattctcgatttgggtacatctggtgaaaatgttaagagagtaaaattgtac
cgatttttacggaaacacgcaaccggcattgcgccaacggagctacacatcgttcacgtt
gagagagggatgagctgggcagaagctatggatcggtgggaatcactaacaggatccaaa
gaaggcttttacctgagtcatcaggtcagaaacggaaagcagacagctatattggctgtg
gcagtcgaaagtggcaagaaaaaaggtgaaaatagaaaggaccatctttacacagtctac
aggcctaatacgggtctgcagttgcgacaagagacgttgggcgaattagagaaaaagtac
aaaaaggtggaaactgaagaagccgaaccacattggactcagcagtatgacgcatcagta
gacacatgttctcatgcgtactggcggggaaattgcaaaaataccacattgggactggat
tgtgaagttggattgcgtaggcgatcctacaatgtacttgcaggatcggtgctgagcgtg
tggagtcgagtagaaaatgtactagctacaagatctggccacaattcaaagatgcaggtt
gtgcgtttgagaactgatgagagcttaaaaatagtgggcacgttaatcccaaaatcttgt
atggaagcattgcgcgaagctctctcatcagatgctgaaaaaactgaggagcaaacattc
tga
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