Neodiprion lecontei (redheaded pine sawfly): 107217510
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Entry
107217510 CDS
T09006
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107217510
04131 Membrane trafficking [BR:
nlo04131
]
107217510
03029 Mitochondrial biogenesis [BR:
nlo03029
]
107217510
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107217510
Membrane trafficking [BR:
nlo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107217510
Mitochondrial biogenesis [BR:
nlo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
107217510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
107217510
NCBI-ProteinID:
XP_015510552
UniProt:
A0A6J0B8L8
LinkDB
All DBs
Position
3:8091110..8103861
Genome browser
AA seq
2911 aa
AA seq
DB search
MATINGILKAVDTLKNLQLQDTSHDCAARKKEKIAYCTTVADGICSSAARLTPKFSQVLN
VAIETLLMLCDDSESDVRMVADECLNRIIRGAMTDGNIVKVQIVLYCEIKKNGTARTLRT
ALWRFAQLGHMIRPLKGKAYVANLIPCIVAIAQRSEESVIETLANSLPLILKTLGNFTTD
SNVKTLLNAFCQNIPSTQAVFRRTAANMILTTCLNSRNPQAFLLHVLQYMIDTLVPITDD
EDRVTTVIGVFGCLRIIIPHIDETSNLSQPDVPLHSFIQVYELCLHFARWHSDHNVVNAA
LETLAQLLQFPLKELVPILVSCQGITRSRIAMNENTARLSLGPMSGSNVTISGRNLDSTL
NLFDPDIPEIKPTVEKWIVDSENVLPVIQRPHIKQADTNQVIGKKEKSLENYSSLIIGSL
DSEGIEEESDTGSDIGKAERSPDLSLPSLQSKEDEYLDEVSSSVTSLHRTSSGVLYHECD
IGMFTDADVPLKYCCRYLVSSFLLTGIPGQLIPDKMFRVSVKSLALTCIGHILRLYPNLL
LSTIDKTPNSNAEQQYISDILLFANHMDPQIRGNVAMVIGYFLKAVFLQSGDKYRNMEIF
LRSTVPDRMKDNILSLENLTALLLEGLKDESATTCRQTLLALNLCLTELIESANNKYALP
ILKALPLLVKNPYFLVKIKLVEVLSNLPYTTVEYITGGPHFQKNVISVMVELLGDQDQRV
RHATATAIVQIVPLLYYQHPHENTVTRKASKLTERYLSDMISNPLENSSFQTGNNSSFNS
LPKPFDSLCQQDGDEYDERIESVLSRIISLLTQKLVVGSSKYLNYGCCETLSLLSETFLT
TIYPRAWDCLIPKPIVKKTYKRSNSRGDTINEAQPAGGPVAPTSNALISLTVSFLSSSPL
SLDLSTHRHLMILAGNLASGMAVCNLKPNEPVNKSDSEPVKLWGLFKEKQIHQHFEQLLT
HVVRILNTFVHVIDEVHLQHPNTKSALPPLPTAQALSPKRKLISDQKSKDKEEKTSSSKF
GREQMGVFTNFPHYMKLYEILKAANTNYKSTLESEASKMYLSLLNATLQVLSQILEIATI
HEAGRIAEEILHYLQTTVILSPTATVQCVQQLLKCLFGSNLSVRWIDPDYQKNFERRNIF
RDDSKGFYTQCFQTPARQMADMIKTIGNNCRSGNDPSSGWIGLIQRKGDRKMSSVFRSLS
RYPDQKASVASFIRLFEPMVIKSLKQYTVTSCVSLQCRVLLLLSQLVQLRVNYCLLDQDQ
IFIGFVLKQFEFIEDGYIHETEELIPKIFNFLVQLSYEKYHSKVIIGIPKIIQLCDGLMA
SGQSPLTHCIPALVPLIEDIFLIRGSSSTVAEQKELETTRDVLVSMLLRLVEYHQVIQLL
AACLTESRYSSDGNGEEKWTRWSRLTIDSILPVLASGKVRLESKEAHIALVKLFSAVSPT
VFRPVDPLLKVLFIQTPMAQDSVLTMERWLGMVNVVLLALISYAKEEAMLARLSDLSLYN
ANFYSGSLYTSKEPMSDPLNVRSASAYDIAPEKVLARFLFKVIGLITSKVYDLVGLINYK
NHDCYLGAANSVGSDNYLIQQFSFFLQLSIHMFESGSHCKVANAAMQMMQGRNVLQEDRL
MLTELNFLMLQLASKCPILTCQWAYLMTLLSYSEMYFWEEILAKQSPNNAVRSTLSRYNP
SAVNSDQTELTSNLCNINGEIVRKGSTILFCDYVCENINDAEPLTWLLVNHIEETISLAR
EPPVKELLAAAVHRNPAASGLLVQAIAARCLDLSKPSFVKRLLQCLEGTHQSQSGALILA
MVPRLLTSKHIALCRLAAKIASRRAEVLLTLNTEDIKTQLPRDDFIEMMNILLSTRLAKK
YGSLVSLLNKLGAQHYDLSPLELEQRRPFNPSSIKGIQLDRNWFYLQTKLRCCHNNRKYS
LLESAELLGNMNYEDSLQIMSSNDFNSKIVKECFKLGIRYTVKKCQELGFSRNGEETDIV
FEENDLYKAAKECLLQHVQNINELVPKQREIFHPVGRDMSTKEAKYAAKLSELMNDNVYW
NTLLTIIPSVTVYIETLPVLVKYGLSEIDTKFEDVLAKFGLLCFEVIHWMIKECENDKRK
LNPEELESALRCAEAVLKNQNLHKAFGSNHYWVCTASATLTRIVEHFLASNQRLPVVNSC
GLKPALENNETRPYAQACIEMAMLVAWLEKYQGEGTPDNIPLFLFNPIKSLIITVSREPL
VNSFVLTPPLVWKHGWHVVGSGPTKCLVPLLSSESNLLHEVEVLEQFIYRLTLLGWTSRL
QFEETWMALLSLLNITQNEGMSFDELAVSIQATSLAVQAITNLLTQTLLLPCPGNPVNST
FIHQSRDPQLSVHKINSQKLYLIQETLISKFEYVNESKSMHGLTLDHIFRRGNIERVSNR
HQYSYSQFSLPYLWASCSLHEDKLSSSVLELKKYRNNVLESLSLDLNSCLHFLLELYSSW
TMPRVNTPLRLLNEVTKSILAISELFTERFQYQWMLDTCLDLSRVHPIENEILHQYLVIA
VCKATAVLTPLNGETLEKVKRLVETSLKSGFLPARVFALQGTLYLLQSAVFAGCEETMNI
IHPLAIEYIQKHIDAQDSQGVLSQSEEHQGVMWALVFFLLEHAEDTPPDAEAPAVLELVL
SLVNTQNISTSLHQTLLQGLERLVATRSVVGKVAEQIVKVAVDRLKQASPILALPALQLL
LTCMYTGAAEKLNNPEIEEPLPDEEPEVLVQSIERTSAIFDRIKKGYPMEVEVLCAVLPG
VLGDFFPPWEILTKVIGEFLSPQQPHPRLLSAVVFQVCERACNSAQLGLLQEWVVFSLPN
FIQSLPIAMSTWCLSCFFISASTNPWLRAFFPHVQSRIGKYEYEDKKILCISAADFYQKL
SNTNQKMAFVETFETAAKEPGTPFSDILASL
NT seq
8736 nt
NT seq
+upstream
nt +downstream
nt
atggctacgattaacggaatactcaaagcggtggatacattgaaaaatttgcaacttcaa
gatacttcccacgattgtgccgccagaaaaaaagaaaaaatcgcgtactgcactactgtg
gcagacggcatatgctcttctgccgctagactcactccaaaattttctcaagttcttaac
gtcgctatagagacgctgctaatgctttgtgatgactcggaatcagatgtcagaatggtt
gccgacgaatgcttgaacaggataatacgaggggctatgacagatggcaacatagtgaag
gtacaaatcgtgttatattgcgaaataaaaaagaacggtactgcccgaacattaagaact
gcactatggaggttcgcgcagctggggcacatgatccggccgctgaaaggaaaggcttac
gtggcaaatctgataccttgcattgtagctattgctcagcgttccgaagaatctgttatc
gagacactagccaattctttaccattgattttgaaaactctggggaattttacaacagat
agcaatgtgaagactctactcaatgcattctgtcaaaacataccttcaacacaggctgta
ttccgcagaacagcagctaatatgattcttacgacttgcttgaactctcgaaatcctcag
gctttcttattgcacgttttacagtatatgatagatactcttgtgccaataactgatgac
gaagaccgtgttacaacggtaattggagtatttggctgtctaaggataataatacctcat
attgatgaaacatcaaatttgagccaacctgacgtcccccttcatagctttatacaggtg
tatgagctatgtctacactttgccaggtggcattccgatcacaatgtcgtcaatgcagcg
ttggagaccttggctcaattactacaattccctttaaaagaattggttccgatcttggtt
tcctgtcaagggattacacggagcaggatagcaatgaatgaaaatacagcccgcctttct
ttgggaccgatgagtggttccaatgtaacaatatctggaagaaatttggattcgacatta
aatcttttcgatccagatattcctgaaattaaaccaaccgtagagaaatggattgttgat
tcggagaatgtattaccagtgattcaacgaccccatatcaaacaagccgacaccaatcaa
gtcatagggaaaaaggaaaagtctttggagaattacagcagcctgatcatcggatctctt
gacagtgagggaatcgaggaagagagcgacactggaagtgatattgggaaggcggagcgt
tcgcctgatcttagtttgccgagtttacaatctaaagaagacgagtacttggacgaggta
tcatcgtccgtaacatctttgcatagaacatcgtccggagttctatatcacgaatgtgac
ataggaatgttcactgacgcggacgtaccactaaaatattgttgtcgatacttggtgtcg
tcgtttctgctgactggaattcctggtcaattgatacctgacaaaatgtttcgagttagc
gttaaatcacttgctctaacttgcattggtcatattttacgactttatccaaacttactt
ttatcaacaattgataaaacgccgaatagcaatgcagaacaacaatacatcagcgatata
ttactttttgctaatcatatggatcctcaaataagagggaatgttgccatggtaattgga
tattttctgaaagctgttttccttcaatctggtgataaatacagaaatatggaaatattt
ctaaggtcgaccgtacctgatagaatgaaggataatatcttatcgttagaaaatcttaca
gcgctactattagagggattgaaggacgaatcggctacaacatgcagacaaacactttta
gcattaaatctatgtttgactgaactgatagagtcagcaaataataagtatgctttacca
attctcaaagctctgccactacttgttaaaaatccatattttcttgttaaaatcaagcta
gtcgaggttcttagcaatttgccatacacaaccgtcgagtacataacaggtggtccgcat
tttcaaaaaaatgttatctcggtaatggttgagttattgggggaccaagatcaaagggta
cgtcacgctacagctactgctattgttcagattgttcccttgctgtactatcaacatccg
cacgaaaacacagtgacaaggaaggcgtctaaattaactgaaagatatttatccgatatg
atatcgaacccattagaaaattcatctttccaaacaggaaacaactcatcgttcaacagt
ctgccaaaacctttcgattcgttatgtcaacaggatggagatgaatatgacgaaagaata
gaatccgtactatcgagaataattagtttgcttacgcaaaaactggtcgtaggttcgtca
aagtacttgaactacgggtgttgtgagacgcttagtttactcagtgaaacattcttaacg
acgatttatccaagagcctgggattgtttaattccaaaaccaattgtcaaaaagacatac
aagaggtccaacagccgtggagatacaataaacgaagcacagccagctggaggtcctgtt
gcacccacaagtaatgcattgatatccttaactgtgtcttttttatcttcgtccccgttg
agcctagacctttcaactcacagacatttgatgattttggctgggaacttggcgtcagga
atggctgtgtgcaatttaaagccaaatgaacctgtgaacaaaagtgattccgaaccagtt
aaattgtggggcttgttcaaggagaaacaaattcatcagcatttcgaacagctcttgacg
catgtcgtcagaattctcaatacttttgtacatgtcattgatgaggtacatttgcagcat
ccgaatactaaatctgctctgccacctctgccaactgctcaagcattatctcctaaaaga
aaattgatttccgatcagaaatctaaagataaagaggaaaagacatccagctcgaagttc
ggtcgggaacaaatgggcgtttttaccaattttccacattatatgaaattgtacgagatt
ttaaaggctgctaatacaaattataaatctacattagaatccgaagcaagtaaaatgtat
ctctcactgttgaatgcgacgttacaagtgttatcccaaatcttggaaatagcgactata
catgaagctggcaggatagcggaagaaatattacattatttgcaaacaacggttattttg
tctccaacagcaacggtccaatgtgtacagcagctgctcaaatgtttgtttggaagtaac
ttgagcgttcgatggatagatccagattatcagaaaaatttcgagagaagaaacatcttt
agagatgattccaagggtttttatacacaatgctttcaaacaccagcaaggcaaatggca
gatatgattaaaactatcggcaataattgtcgaagtgggaatgatcctagttctggctgg
ataggtctcattcaaagaaaaggggaccgtaaaatgagctcagtattcagaagtttgtca
cggtatcccgatcagaaagcatcggttgcctcatttattcgacttttcgaaccgatggtc
atcaaatcattgaaacaatacacagtcacaagttgcgtatcattacaatgcagagtgttg
ttgttgttaagtcaattggtacaactacgggtgaattactgtttgttggaccaggatcag
atatttattggcttcgttctaaagcagtttgaatttatcgaggacggatacattcatgaa
actgaagaattaataccaaaaatatttaactttcttgttcagctgtcttatgagaaatat
cactccaaggtgataattggcatcccgaagataattcagttatgcgatggactcatggcc
agtggacagtcacctctaactcactgcatcccggctcttgtacctttaattgaagacata
tttcttatcaggggttcaagttcaacggtggcagaacaaaaggaattggaaacaaccaga
gatgttttagtatctatgttgctaagattagtcgagtatcatcaggtaatccaattgcta
gccgcctgtttaacggaatcaagatacagcagcgatggtaacggtgaagaaaagtggaca
cgatggtctaggctgaccatagattcaattctacccgttctagcttctggtaaagtcaga
ctcgagtccaaggaggctcacatcgcactagtcaagcttttctcagctgtgtcgccaaca
gtattcagaccggtcgatccgttgctcaaagtattgttcatccaaacaccaatggcacaa
gattccgttctgactatggaacgctggctgggaatggtaaacgtggttttacttgcttta
atatcatatgccaaagaagaagccatgcttgctcgactctcggatttgagcttgtacaat
gccaacttttattctggttctctgtacacctcaaaggaaccaatgtccgatccgttgaat
gtgagaagtgcgtccgcatacgacattgcgccagagaaagtattagccaggttcctattt
aaagttattggcttgattacatccaaggtgtacgatctagttggtcttatcaattacaaa
aaccacgattgctatctgggtgctgctaattctgtaggaagcgacaactatttgatacaa
caattttcattctttttacaattgagtattcacatgttcgagtctggtagccactgtaaa
gttgctaatgccgcaatgcaaatgatgcaagggcgaaacgtactccaggaagacaggtta
atgttaaccgaattgaattttctaatgctccaattagcgagcaaatgtcctatactgacg
tgccagtgggcatatctgatgacgcttcttagttacagtgaaatgtacttttgggaagag
attttagccaaacagtcaccaaataatgcagtacgttcaactctcagcaggtacaacccg
agtgctgtgaactccgaccaaacagagctaacgagcaacctgtgcaacattaatggagaa
attgtaaggaaaggcagcaccatactattctgtgactatgtgtgtgagaatattaacgat
gccgaaccactaacctggctgttggtaaatcatattgaggaaactatatctctcgctaga
gaacctccagtaaaagaactcctggccgcggcggttcataggaatccggcagcgagtggt
ctccttgttcaggcgatagctgctaggtgcttagatctgtcaaagcctagttttgtaaaa
agattgcttcagtgcttggaaggtacccaccagtctcaaagcggagctctaattttggca
atggtaccaagactactcacttcgaaacatatagcattgtgtagactcgcggcaaaaatt
gctagtcgaagggctgaagttttgctaacattgaatactgaggacattaagacgcagttg
cctagagacgatttcatagagatgatgaacattttgttatcgacgagattggcgaagaaa
tatggtagcctagttagcttgctgaacaaactcggtgctcaacactacgatttgtcaccg
ttggaattagaacagcgtcggcctttcaatccgtcgagcatcaagggtatccagcttgat
aggaactggttttatcttcagactaaacttcgttgttgtcataataatagaaaatacagt
ttactagaatctgctgaactactgggtaatatgaactatgaagactctttgcaaattatg
tcctctaatgattttaattcaaaaatcgtcaaggagtgcttcaagttgggcattagatat
acagttaaaaaatgtcaagagcttggattcagtagaaacggtgaagaaactgatattgtg
ttcgaagaaaacgatctctacaaagcggcaaaggaatgcttactgcaacatgtacagaat
atcaacgaactcgtgcctaaacaacgtgaaatttttcatcccgtaggtcgagacatgagt
actaaggaggctaaatacgcagccaaactttcggagctaatgaacgacaatgtttactgg
aatactttgcttacaattattccatccgttactgtatacattgaaacattaccagtgcta
gtgaaatatggtctgtcagagatcgatacgaaattcgaggatgttttggcaaagttcgga
ctgctctgctttgaagtgatacactggatgattaaggaatgtgaaaatgacaagagaaaa
ttaaacccagaagaattggagtcggcattaaggtgcgctgaggcagtattgaagaatcag
aatctgcataaagcatttggcagtaatcattactgggtttgtactgcgtcagcgacgttg
acaaggattgtcgaacattttttggcttctaatcagcgtcttccagtcgtcaacagttgc
ggactaaaaccagcactagaaaataatgaaacaagaccttacgcacaagcctgtatagaa
atggcaatgcttgttgcttggctggaaaaatatcaaggcgagggtactccggataacatt
ccattattcttattcaatccaattaaaagtctgattataactgtgagcagagaaccttta
gtcaattcttttgttctcactcctccgctagtttggaagcatggctggcacgtagtcggc
tcaggtcccaccaaatgtcttgtgccgttgttatcttctgagtcaaatttgttgcacgaa
gtcgaagtacttgaacagtttatttatcgattgacattgttaggatggacctccaggctt
cagtttgaggaaacgtggatggcgttgttgagtttattaaatatcactcaaaatgagggc
atgtcgttcgatgaattagctgtttccattcaagcgactagcttggctgttcaagctata
accaatctgttgacccagacattgcttttgccgtgtcccgggaatccggtaaacagcact
ttcattcaccagtcaagagatccacagctttctgtgcataaaattaactctcagaaactg
tacttgatacaagaaaccctgatatcaaagtttgagtatgttaatgaatccaaaagtatg
catgggttgactctagatcacatttttcgccgagggaacattgaacgggtttctaacagg
catcaatacagttacagtcagttttccctaccttatttatgggcgtcatgctctctgcac
gaagacaaactcagctctagtgttttggagttaaagaaatatcgtaacaacgttttggag
tctttatctttggacctaaattcttgtctccactttttgctggagctctactcgtcatgg
actatgccacgcgtaaacacacccctgagattattaaacgaagtgaccaaatcaatacta
gctatctcagaattatttacagagagatttcagtatcaatggatgcttgatacttgcttg
gatttgtccagggttcatccaatcgagaatgaaatcttacatcagtacctcgttattgca
gtgtgtaaagctactgctgttctcaccccactaaatggtgaaactcttgaaaaagtgaaa
cgtttggtagagacaagtttaaaatctggtttcctgccagccagagtctttgccttgcaa
ggaaccctttatctcttgcaaagtgctgtatttgccggctgtgaagaaactatgaatatt
atccatccattagccatagagtatattcagaagcacatagatgctcaagattcgcaaggt
gttctcagccagagtgaagagcatcaaggagtaatgtgggctctagtctttttcctgttg
gagcatgccgaagatacgccgccagacgcagaagctccggcagtgctggaactggtgctt
tctctggtcaatactcaaaatatttcaacttctcttcaccaaacgttgttacaaggtttg
gagcgattagttgcaacaaggagtgtagttggtaaagttgcagaacaaatcgtgaaagtt
gcagttgatagactgaaacaggcgagtccgattctggcattacctgctttgcagttactg
ctaacttgtatgtatactggtgcagccgagaagttgaacaatccagagattgaggaacct
ttacctgacgaggagcctgaagtattggtgcagtctatcgaaagaacgtctgcaattttt
gatcgaatcaaaaagggataccctatggaagtcgaggtgttatgtgcagttctaccaggt
gttcttggcgattttttcccaccctgggaaattctcaccaaagtaattggggaattttta
tcacctcaacaacctcatcccagattattatctgctgttgttttccaggtatgtgaaaga
gcttgcaacagcgcacaactgggactactgcaggaatgggtagttttcagcttaccaaac
ttcatacagagtttaccaatcgcaatgtcaacgtggtgtttgtcttgtttctttattagt
gcatcgacaaatccctggctcagagcattctttccacatgtacagtcaagaattggaaag
tacgaatacgaggataaaaaaattctctgcatatcggcagctgatttttaccagaagctc
tcaaacactaatcaaaagatggcattcgttgagacttttgaaacagcagcaaaggaacca
ggcactccattcagtgatattttagcatctctataa
DBGET
integrated database retrieval system
