Neodiprion lecontei (redheaded pine sawfly): 107217564
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Entry
107217564 CDS
T09006
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107217564
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
LAMB1
A24_N_bact
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
107217564
NCBI-ProteinID:
XP_046597904
UniProt:
A0ABM3GCA7
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Position
5:complement(33821327..33829177)
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AA seq
1767 aa
AA seq
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MVAVMAAPAAAQRPYGRIRGAQRRYPVKNLRPCDEGPCYPATGNLLIGRENRLTASSTCG
LKGPERFCIVSHLKERKKCFYCNAAIRKQQHNVENITYTHSPRTLGDSWWQSENGVENVT
LQLDLEAEFHFTHIIIRFQTFRPGAMLIERSSDYGKTWRVYKYFAHNCEQTFPHVPTHVP
QKLNDVVCDSRYSTVDPSTDGEIIFRVLLPNVQIDNPYSQEVQNLLKMTNLRINFTRLLT
LGDDLLDNRAEIKEKYYYAIKDMAVRGSCSCYGHASRCLPLPGIPNRQDMVHGRCECTHN
TKGLNCEMCEDFYNDLPWKPAAGKQTHACKKCNCNNHATSCHFDRATYDRTGRVSGGVCD
DCQHNTQGQNCEICKPFYYHDFTRDISDPDACQPCDCDQLGSLDDGICDPLTDMLTGQES
GRCHCKLNVEGRRCDRCKAGFWNFSPENPEGCQACSCHALGTVDLHGCDVSSGKCTCKPY
VIGRDCDQCYPEFWGLSDDREGCKPCDCDLGGAYDNLCDVVTGQCSCRAHIDGRTCNEPE
QNHYTVALDYLVYEGERSKTNKSQIVIREPYRDGRTNTWTGPGFIRAFEGSTLEFTIDDV
MKSMEYDIVLRYESEVPGILEEAQIFVEREEDVDPEGACANWEPEDDELYIRLPVNSRSA
VAVPSVCLEKGKKYIVVLQFKNSYDRVGGPTASILIDSIVLMPKVEGIPFFAGSPPSEMR
RQDFERRHCDEIFYNVIPSGETNEVDICAQYRKSIGYFIFDGAPSCECNPTGSNSLLCDQ
YGGSCPCKPNIVGRRCDRCAPGTYGFGPAGCVPCDCDSVGAEDNFCDFETGRCKCRPNTY
GRTCGECDPGFWNFPHCERCKCNGHAQTCDSVTGACHDCQDFTTGHQCDRCAVKYYGDPQ
IGVDIPCRPCPCPGTWDSGHSFADRCSLDPVTLDVVCECYEGYAGARCDICAENYFGSPD
VQTGRCVPCDCNNNTDLSQPGNCNPHTGRCLQCLYDTDGPNCQICKPDFYGDALKQDCKE
CGCNVLGTNFRDGHCNHRDGQCPCLPNVIGQYCDTCVENHWRIASGEGCDPCDCDVIGSV
SEKCNEYDGTCQCRSGFGGRQCNQCETNHWGNPNIECLPCECNLIGSSTQQCDRETGACI
CLAGIGGVKCDHCDRGYLGVAPSCIPCGECFKNWDLTLSGLSNRTYDVIDAASKIQKIGI
AGIYSQEFDNMDEVLMGVRELVNKTSVTAEDLLELVDFANNLNNTVSFSDAILDEIDNYI
GSISQRVSLGEVALQNMKNRTVSLIEAAAELKKNATVLQEADVYGALNLTHQMAKQSDQA
EALASSSTTALADADRYQKNTENLLAKRSESFTDKLNENDNSLKRLKGELDEFNQLIPDL
NLAMCGASVDECDELCGGAGCGFCGGLSCDDGAVTEAERALDLAKQRAAGIKKHKDESEQ
LLRNMTQMKDDAVAAKHLAQLGLNAAFETYNFSSNFTKNLENLHSRISNSLNEEQPTPAM
VKDLAEKVLEKNIKLNPDEIKDLADSIRSIVGSLTDSEKILEDAAEDLELAEILRDEAVR
AKDSAVAQSTRAGNIVVFLTEAEIAAEDAQLAIDEIERHISLSHNDLTDILIEIDAVAEK
ADNTTAEIDDLDRRLTELQTQIVKNDFILTQEIGSEIGDVTVEAENTRMKTKKLVQEFEV
ANQAVRLKAEKSEGKISRSKLLLQRASELAADTTTKFKDINGMEGTYAENEKTLADLMSE
VESLTRQMEKHLNHIQHKSQTYAQCST
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagtgatggcagctcctgctgctgctcagcgtccctatggcagaatccgagga
gcgcagagaagatacccagtaaagaatctacgcccttgcgacgaaggaccatgctatccg
gcgactggaaatttactaattggtcgagagaacagactgacagcatcgtcgacctgtgga
ttaaaaggaccggaaagattctgcatagtgtcccatctgaaagagaggaaaaagtgtttc
tattgtaacgccgcgattcgtaagcaacaacacaacgtggagaatatcacatacactcat
agccctcgaacccttggcgactcttggtggcaatcggagaatggagttgaaaatgtcact
ttacaattggatttggaggcagaatttcactttactcatattataataaggtttcagacc
tttagaccgggggccatgttgatcgagcgatcatcagattacggcaaaacgtggcgtgtt
tacaaatacttcgcccataattgcgagcagacatttcctcatgtaccaactcacgtgccc
caaaaattaaacgacgttgtctgtgactcgcgttactcaaccgtcgatccgtcgactgac
ggcgaaataatcttcagggtattgttgcccaatgtgcagatcgacaatccctattctcag
gaagtgcaaaatcttctgaaaatgaccaatctgagaataaacttcacgaggcttctcact
ctcggtgacgacttgttggacaatcgggctgagatcaaagaaaagtattactacgctata
aaagacatggctgttcgaggatcctgctcgtgctatggacacgcctcgaggtgcttgcct
ctgcctggtatacctaaccgccaggacatggttcacggacgctgtgaatgcacgcacaac
actaagggactgaactgtgaaatgtgcgaagacttttataacgacctaccttggaaaccg
gcggctggaaaacagacccatgcctgtaagaagtgtaactgtaacaatcacgccaccagt
tgtcacttcgaccgagccacctacgacagaactggcagagtttccggcggtgtctgtgac
gattgtcagcataacacgcagggacagaactgcgagatttgcaaaccgttttactaccat
gacttcaccagagatatcagtgaccctgatgcctgccaaccttgcgattgtgaccaactt
ggttcgttggacgacggcatttgcgaccctctgaccgatatgttgactggtcaggaatca
ggccgctgccattgcaagctgaacgtggaagggcgtcgctgtgaccgctgtaaagctgga
ttctggaactttagtccagagaatccagaaggctgtcaagcctgctcttgtcatgcactc
ggcacggttgatttacatgggtgtgacgtgtcctctggaaaatgcacttgcaagccatac
gtaattggtcgcgattgtgatcagtgctacccagagttttggggcctctccgatgaccga
gaaggctgcaagccgtgcgactgtgatcttggaggtgcttatgataacttatgtgacgta
gtaactggccagtgcagctgtagggcacatatcgacggcagaacttgcaatgaaccggag
cagaaccattacacagttgctctagattatctggtttacgaaggagaacgaagcaaaacc
aataaaagccaaatcgtgatccgagaaccatatcgtgatggtagaaccaatacctggacc
ggaccaggtttcataagagcctttgaaggttcgacgttggagttcacgatcgacgatgta
atgaagtccatggaatacgacatagtcttacgttacgagtccgaggtcccgggtatttta
gaagaagctcagatatttgtcgaacgagaggaagacgtggaccctgaaggggcatgtgct
aattgggaaccggaagatgacgaactgtatattcggcttccggtgaactcgcggagcgcc
gttgcggtaccgtcagtgtgtcttgagaaagggaaaaaatacatcgtagtcctccagttc
aagaattcgtatgaccgtgtaggcggccccacagcttcaatactgattgactctatcgtc
ctgatgcccaaagtggaaggtatcccgttcttcgcgggttctccacccagcgaaatgcgg
agacaagacttcgaaaggcgtcattgcgacgagatattttacaatgttatcccatccggg
gaaactaacgaggttgacatttgtgcgcagtaccgcaaaagcatcggttattttatattc
gatggagcaccctcctgcgagtgtaatccgacgggatccaacagtctgctgtgtgaccaa
tacggaggctcgtgtccgtgcaagccaaacattgttggtcgacgttgcgatcgttgtgct
cctgggacatatgggtttggtccagctggttgcgtgccatgcgactgtgacagcgtcggc
gctgaggataatttctgcgattttgagacagggaggtgcaagtgtaggccaaacacgtac
ggaagaacatgcggcgagtgtgatcctggcttttggaacttcccacactgcgagcggtgc
aagtgcaacggtcacgcccagacctgcgattcggtgacgggggcttgtcacgactgccag
gacttcacaactggtcaccagtgcgatagatgtgccgtaaagtattacggagaccctcaa
atcggggttgacattccatgcaggccttgtccttgtccgggaacttgggactccggccat
tcgttcgctgacaggtgttctctagaccccgtcacgttagacgtggtgtgcgaatgttac
gaaggatacgccggagccaggtgtgacatttgcgctgaaaactactttggtagtcccgat
gtgcaaacgggaagatgcgtgccctgtgactgcaacaacaacaccgatctgtcgcaacca
gggaattgcaacccgcacactggacgctgtctccaatgtttgtacgacactgacggacca
aattgtcaaatctgtaagcccgacttttacggtgacgcgctgaaacaggattgcaaggag
tgcggatgcaacgtcctcggtaccaacttccgcgacggtcactgcaatcatcgtgatgga
cagtgtccatgtctgccgaacgtcattggtcagtactgtgatacctgcgtagaaaaccac
tggagaattgccagcggagaaggctgcgatccgtgcgattgcgacgtgattggaagcgtg
tcagaaaaatgtaacgagtatgacggtacctgccaatgtcgctctggctttggaggaagg
cagtgtaaccagtgcgaaacgaatcactggggcaatcccaacatcgagtgtctgccgtgc
gagtgtaacctcatcggatcatccactcaacagtgtgacagggaaactggggcctgcata
tgtctggctggaattggaggcgtcaagtgcgaccactgcgaccgtgggtaccttggagtt
gctccgagctgcattccgtgtggcgaatgttttaaaaactgggatctgacgctgagtggt
ttgagcaacagaacatacgatgtcatagacgcagcatcgaaaattcagaagattggaata
gccggaatttacagtcaggaatttgataatatggacgaagtactgatgggggttcgagag
ctcgtcaacaagacgagcgtcacggccgaggaccttctcgagctcgttgattttgccaat
aatctcaacaacacagtttccttctcggacgccattctcgacgaaatcgacaactacatt
ggatccatcagtcagcgggtcagtctcggtgaagtggctctacagaacatgaagaaccga
acggttagcttgatcgaagccgctgctgagctcaaaaagaacgctacagtcttgcaggag
gccgatgtctacggtgctctgaacctaactcaccaaatggcgaagcaatcggaccaggca
gaagcgctggccagtagttcaacgaccgctttagcggacgctgacagatatcagaagaac
actgaaaacttgcttgccaagcggtcagagtctttcactgacaagctcaatgagaacgat
aattccctgaagagactcaaaggtgaactcgacgaattcaaccagctgattcccgacctc
aatctcgccatgtgtggagctagtgtcgacgaatgcgacgaactatgcgggggtgctggc
tgcggtttttgtggtggtctttcttgcgatgacggtgcagttacggaggcagaaagggcc
ttggatcttgccaagcagcgagctgccggtataaagaaacacaaagacgaaagcgagcag
ttgcttagaaacatgacgcaaatgaaagatgatgctgtagccgcgaaacatctcgctcaa
ctcggcctgaatgctgcattcgagacttacaacttctcgagtaacttcacgaaaaatctg
gaaaacctccacagcagaatatctaatagcctgaacgaagaacaaccgactccagcgatg
gtgaaagacttggctgaaaaggtgctggagaaaaacataaagttgaacccggacgagatc
aaggacctggctgacagcataagaagcatcgtcggttcgctgacggattctgagaagatc
ctcgaggatgctgcggaagatttggagctagctgaaattctgcgagacgaggcagtgagg
gctaaggattcggctgtcgcgcagagtacgcgggctggaaacatagtcgtgtttttaaca
gaggcggaaatcgctgcggaagacgcacagttggccatagacgagatcgagcgacatata
tccctgtcccataatgatttgaccgatatactgatcgagattgatgcggttgcggaaaag
gctgacaacactactgcagaaattgacgatttggacaggcgtttgaccgagcttcagact
cagatcgtaaaaaatgactttatattgacgcaagaaatcggttcagagatcggcgacgtc
acggttgaggctgagaacacaagaatgaagactaaaaaattggttcaagaattcgaagtg
gcgaatcaagcggtgaggctcaaggccgaaaagagtgagggaaaaatttctaggtcgaaa
ctacttctgcaacgggcttctgagctcgctgctgacacgaccaccaaatttaaggacatt
aatggaatggaaggaacctacgcagagaacgagaaaaccctggctgacctcatgtccgag
gtcgagtccctcacgcgtcaaatggaaaaacacttgaaccacattcagcacaagtcacag
acctatgctcagtgctcgacgtag
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integrated database retrieval system
