Neodiprion lecontei (redheaded pine sawfly): 107217628
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Entry
107217628 CDS
T09006
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03008
Ribosome biogenesis in eukaryotes
nlo03013
Nucleocytoplasmic transport
nlo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107217628
03015 mRNA surveillance pathway
107217628
03008 Ribosome biogenesis in eukaryotes
107217628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107217628
03009 Ribosome biogenesis [BR:
nlo03009
]
107217628
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107217628
mRNA cycle factors
Stress granule specific factors
107217628
Ribosome biogenesis [BR:
nlo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
107217628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
107217628
NCBI-ProteinID:
XP_015510716
UniProt:
A0A6J0B947
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Position
5:complement(31982034..31989427)
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AA seq
633 aa
AA seq
DB search
MPKKSSKAQWNGRDPAAQNVQGKHYFDHDNRTIHPNSGRPRVSFKSQGRHGPDRGRNLKT
GLTNYLGEDISMTVGASNGPRQVLVRGKIGRRASWGRLIPFPQHGRREGRQGSQHRPPMF
ADSNWFKVTIPYGHKYQKDFVVKSLNSYISPDMFVPIMYKVLPNEAVFYVDDPNTADKLY
NCDRKITTNDGFKIQVRVKPGFPQVEIDQTLRERMKLAMVKRYVQETNALDLSKFHQDPD
LVTDYFCALFRPLMLAAVIDIVAEHIPNLEALNLDGNKLAVIERLNILTKKLPKLKVLYI
GENRIQEVSHLDVIKDLKLEELRLAGNPVCAKYKDRQTAYFSDVRKRFPRLLKLDGIILP
PPIRFDVADETASLPPTQRMYVVNTDAQAIAGQFLQQYFMIFDSDNRQPLLDAYHEQASF
SMTVSYGSNGNKLDSYLRENRNLFRLNDIERKRKLLKQGRLPVVSFISEMPKTKHDLDGF
TMDLCLATETMMMIIVTGLFKELDGKKNPIRYFNRTFLIVPEGGGYCICNEQLHISHPTD
EQEKKAFTVRQSQPSSSSTPASTSSGTSVVTGISDEAKQHMTIALSEKTKMNLEWSFKCL
AEVQWDFNNALAAFQEFYTLGQIPPEAFLPNKT
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaaatccagcaaagctcagtggaacggaagagatcccgctgcgcaaaacgtg
cagggtaaacactacttcgatcacgacaatcgcacaatccacccgaactccgggagacct
cgagtgtcattcaaatcacaaggaagacacggaccggatcgaggaagaaacctcaaaact
gggttaacaaattacctgggcgaagacatctcaatgaccgtaggagcgagcaatggacct
aggcaagtcttggtcaggggcaaaatcggtaggcgggcgtcttggggtagattgattccg
tttccgcagcatggccggagagagggaaggcaggggtctcaacaccgccctccaatgttc
gcagactccaactggttcaaagttacgataccatatggacacaagtaccagaaagacttt
gtagtgaagagcctgaacagttacatatcacccgatatgttcgtaccaataatgtacaaa
gtcttaccaaatgaagccgtgttctatgtcgatgacccgaacaccgccgacaaattatac
aactgcgatcgtaaaataactaccaatgatggattcaagatacaagtaagagtaaagcct
ggttttccccaagttgaaatcgatcagacgcttagagaaaggatgaaacttgccatggta
aagagatacgtgcaggaaactaatgcactagatctttccaaatttcatcaagatcctgac
cttgtaacagactacttttgcgccttattcaggccactgatgttggccgcagttatagac
atcgtcgccgagcacatacccaacttagaagcattaaatttagatggtaacaaactggca
gttatcgagcgactcaatattttaaccaaaaagttaccaaaactcaaagttttatacatc
ggtgagaatcggatacaggaagtcagtcatctggatgtgataaaggacctaaaactagaa
gaactgaggctcgctggtaatcccgtttgcgcaaagtacaaagatcgtcaaactgcatat
ttcagtgacgtacgaaagaggtttccaagacttctgaaactggacggaattatactccca
ccgcctattcgatttgacgtcgccgacgagacagccagtttaccgcctactcaaagaatg
tacgtcgttaatacagatgcgcaagcaattgctggccaatttctgcagcagtatttcatg
atattcgacagtgataatcgtcagccattgctagatgcatatcatgaacaggcctcattt
agtatgactgtttcttatggaagtaacggcaataaattggatagttacctacgtgagaat
agaaatctgttccgccttaacgacatcgagagaaaacggaagctactaaagcaaggcaga
cttcctgtagtttcctttatatcagaaatgcccaagactaaacatgacctggacggcttt
actatggatctatgcttagccacggaaaccatgatgatgataatcgttaccggattattc
aaggagctggatggtaagaaaaatcctatccgctacttcaatcgaacttttctcatagtc
cctgagggtggagggtactgcatttgcaatgagcaattgcatattagccatccaaccgac
gagcaggagaagaaagcattcactgtgcgacagagtcagccatctagttcctcaacaccg
gcatcaacatcatcaggtacatcagttgtaactggaattagtgatgaagcgaaacaacac
atgacgatagcgctaagtgaaaagacaaagatgaacttggagtggagtttcaaatgcttg
gcggaggttcaatgggactttaataacgctttggcagcgtttcaggaattttacacactt
ggtcaaataccgccggaagcttttttaccgaacaaaacgtga
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