Neodiprion lecontei (redheaded pine sawfly): 107217935
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Entry
107217935 CDS
T09006
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03013
Nucleocytoplasmic transport
nlo03015
mRNA surveillance pathway
nlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107217935
09122 Translation
03013 Nucleocytoplasmic transport
107217935
03015 mRNA surveillance pathway
107217935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107217935
03041 Spliceosome [BR:
nlo03041
]
107217935
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
107217935
Spliceosome [BR:
nlo03041
]
Common components
Common spliceosomal components
Cap binding complex
107217935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Dehydrin
Motif
Other DBs
NCBI-GeneID:
107217935
NCBI-ProteinID:
XP_015511130
UniProt:
A0A6J0B810
LinkDB
All DBs
Position
5:26563314..26567981
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AA seq
794 aa
AA seq
DB search
MSRRRAHDDDDGYDRVYKKRRRVSENQEIEDRLESLILRVGEKSTSSLESNLEGLASVLE
ADLGVFRTKILRILTDCAIKMPEKCTIYTTLVGLLNAKNFNFGGEFVDYMVKNFKDSLKS
CKWNAARYSLRFLADLVNCHVLSCGSLMQLFDNMLDTANEDSVPQVRRDWYVFAVLSTLP
WVGRELYEKKEQELDHLMVTIEVFLNKRSKKHQPALKVWSSDTPHPQEEYLDCLWAQVRK
LRQDNWAEKHIPRPYLAFDSILCEALQHNLPTLLPPPHHESYTYPIPTVVFRMFDYTDCP
AEGPLLPGSHAIERFLIEEHLRQIIDNHFFERKDCAAQLLNFPYKAKIPLDYSIVEVMFG
ELFRLPSPKHLEICYGSILIELCKLQPSTMPQVLAQATEILFRRIDSMAAAAFDRFVWWF
AYHLSNFQFRWSWEDWDSCLQRDPEHPRPKFIKEVLLKALRLSYFQRIRDMMPETYAELI
PLPPEPIYKYTSEGASTLPGTSAAHELVVSIRRKCTPEEVLTVLNTLPGQGDNEESNTFN
PLKIDVFVQTLLNLGSKSFSHSFAAIGKFHYVFKALAESEEAQICILRNMHALWKNHYQM
MVVLSDKFLKTGIIECSAIANWIFSREMTSEFTKLYIWEILHLTIRKKNKHVIKLNTEVT
EAREKLRRAESRSGSSSEDEDNTKDKSGERPSEDVVERMEEKLEAAQADQKNLFLIIFQR
FIMILSEHLVRCDTDGIDYNTHWYRWTIGRLQQVFLAHHEQVQKYSSTLETLLFTPDLDP
HILDVFHQFVSLRA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcaggagagcacatgacgatgacgatggatacgaccgcgtctataagaagcgg
aggagggtatcagagaatcaggaaattgaagatcgcctggaatcgcttatattgcgagtg
ggtgaaaagtcaacttcgtcattagaaagtaatttggaagggttagcgtctgtgctagaa
gcggatctcggtgtgtttcgtactaagattctccgaatattgactgattgcgctataaaa
atgccagagaaatgtacgatctacacgacgctggtggggctgctgaatgcaaagaatttc
aactttggtggtgaatttgttgactatatggtgaaaaattttaaagattctttaaaaagt
tgcaaatggaacgctgctagatattcgctccggtttcttgctgacttagtcaactgtcac
gttttatcttgcgggtcgcttatgcagctctttgataatatgttagacacggcaaatgag
gacagcgtacctcaagttagacgagactggtacgtttttgctgttctctcaaccctgccg
tgggttggtcgagagttatatgaaaagaaagagcaagaactggatcaccttatggtcacc
attgaagtatttttgaacaaacgaagtaagaaacatcaacctgctctaaaagtatggtcc
agtgacacacctcaccctcaggaagaatatttggactgtctctgggctcaagtacgaaaa
ttgaggcaggataattgggcggaaaaacacattcctcgaccatatcttgctttcgactct
attttatgtgaagctctacaacacaatcttccaacgcttctgcctccaccacaccatgaa
tcttacacgtacccaataccaactgttgtatttcgcatgtttgactatactgactgtcca
gcggaagggccactgctgcctggcagtcatgctatagagagatttcttatcgaagaacat
cttcggcaaattattgataatcacttttttgaaagaaaagattgcgcggcgcaattattg
aactttccatacaaagcaaaaattccacttgattattctattgtggaagtaatgtttgga
gaactcttcagattaccatctccaaaacatttggaaatctgctatggatcgattttgatt
gaactttgtaagttgcaaccatcgactatgccacaggttttagcacaggctaccgaaatt
ttattccgtcgcatcgacagcatggctgcggcagcattcgatagatttgtttggtggttt
gcctatcatctgagcaacttccaatttcgttggtcatgggaagattgggactcatgcctc
cagcgtgaccctgaacatcctcggcctaaattcataaaagaagtgctgctgaaagcattg
agactatcctacttccaaagaattcgcgatatgatgccagaaacttacgccgaactgatc
cctttgcctccagaaccaatttacaagtacacttccgaaggcgcaagcacacttcctgga
acttctgcagcccatgaactagttgtttcaatacgccgcaaatgcacccctgaagaagta
ttgaccgttttgaataccttaccaggtcaaggagacaatgaggaatcaaacacattcaat
ccgttgaaaattgacgtatttgtacagacgttgcttaacctggggtcaaagagcttcagc
cacagtttcgccgctattgggaagtttcattatgtattcaaggctctggccgaatcagag
gaggcacaaatatgcattctaagaaatatgcatgccctatggaaaaatcattatcaaatg
atggttgtactctcagacaaattcttaaagactggaataattgaatgcagtgctatagcc
aattggatattttctcgggaaatgacatctgaatttactaaactctacatctgggaaatt
cttcatttgacgatccgtaaaaagaataaacatgtcattaaactgaacacagaagtgacg
gaggccagagaaaagttacgaagggcggaaagtagatctggatcgtcttcggaagatgag
gacaatactaaagataagtcgggagaaagaccatctgaagacgttgtagagcgaatggaa
gaaaaattggaagctgctcaagcagatcaaaagaatttattcctcatcatttttcagcgt
tttattatgattctttccgaacatcttgttagatgtgatacagatggcatcgattacaat
actcactggtacagatggactattggaaggttgcagcaggtatttttggctcatcacgaa
caagtacaaaaatactcgtcaacactggaaacacttttgttcacgccagatctggatcca
cacattcttgacgtatttcaccagtttgtttcgttacgtgcataa
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