Neodiprion lecontei (redheaded pine sawfly): 107217988
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Entry
107217988 CDS
T09006
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X2
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03030
DNA replication
nlo03410
Base excision repair
nlo03420
Nucleotide excision repair
nlo03430
Mismatch repair
nlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107217988
03410 Base excision repair
107217988
03420 Nucleotide excision repair
107217988
03430 Mismatch repair
107217988
03440 Homologous recombination
107217988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlo03032
]
107217988
03400 DNA repair and recombination proteins [BR:
nlo03400
]
107217988
Enzymes [BR:
nlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107217988
DNA replication proteins [BR:
nlo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
107217988
DNA repair and recombination proteins [BR:
nlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
107217988
MMR (mismatch excision repair)
DNA polymerase delta complex
107217988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
107217988
NCBI-ProteinID:
XP_015511204
UniProt:
A0A6J0B889
LinkDB
All DBs
Position
6:complement(928687..937003)
Genome browser
AA seq
1094 aa
AA seq
DB search
MIIIIIVIITTTAIIMIIIDKVTNDMHKHFTNHMWQYAFCYQGCNTRTANMLRRFGPDQE
NTCSKWNRPDPRPFNPQTDSLTFQQIEVDHYIGQPLAGMPGSKIGPVAIMRMYGVTMEGN
SVCCHVHGFCSYFFVTAPEKFNNSHCKPFKDALNRAVLTDMRSKNDKVTEAVLVVELIYK
QSLYGYAGEDLVPFIKITVALPKLVAPCKRLLEKEMIFPTFSDHVYQAFETNIEFDIRFM
VDTHVVGCSWIKLVPGKWKLRGHPGNDLPLTSRCQLEVDVAWDNFIAHPPEGEWAKVAPF
RILSFDIECAGRKGIFPEANHDPVIQIANMLIRHGDTEPFLRNVFTLDTCAPIIGSQVLS
FQKEAVMLEKWADFVRQCDPDIFTGYNINNFDFPYLINRAQHLKVNSFSYLGRIKDIKSV
IKDQVLQSKQMGRRENKHVNFEGRVPFDLLLVLIRDYKLRSYTLNAVSYHFLQEQKEDVH
HSIISDLQNGNPQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVSLCCLLTRG
QGVKVVSQLLRKAQEKGYLMPTHQSQGSDEQFEGATVIEPKRGYYNDPIATLDYSSLYPS
IIMAHNLCYTTLLLPATQHKLKLTNDKFSQTPTNAMFVKSSVRKGLLPEILENLLNARKL
AKTELKNETDPFKQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISSSTTAYGRAMIE
RTKQEVEQKYCIANGYKHDAVVIYGDTDSVMVKFGVKDMAEAMELGKDAADFVSSKFIKP
IKLEFEKIYFPYLLINKKRYAGLLFTKPDKYDKMDCKGLETVRRDNCPLVANMMNTCLQK
LLIDRDPDGATDYAKQIISDLLCNRIDISQLVITKELTKTEYAAKQAHVELAAKMKKRDA
GTAPKLGDRVPYVFTSAAKGTPAYLKAEDPIYVLENSIPIDSNYYLENQLSKPLLRIFEP
ILGDKAESLLLRGEHTRTKSVATSRVGALAAFTQKKETCMGCKAIMPAGREHMALCQHCE
SREPELFQHELLLGRKLEEKFCRLWTECQRCQGSLHQEVLCTSRDCPIFYMRKKVRIELD
AQEKRIDRFGIPAW
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgataataataataatagtaataataacaacaacagcaatcataatgataatcatagat
aaagtaacaaatgatatgcacaagcatttcactaatcatatgtggcagtacgcattttgt
taccaaggctgcaacactagaactgctaacatgttgcgacgatttggcccagatcaagaa
aacacctgttccaaatggaatcggccagaccctcggccattcaatcctcaaacagactcg
ctcactttccagcaaatagaagttgaccattatatagggcagccgctggctggaatgcca
ggaagcaaaattggaccagtagcaataatgagaatgtacggagtcaccatggaaggaaac
tctgtatgctgtcacgtgcatgggttttgttcctatttttttgtcactgcgccagaaaaa
ttcaataactctcactgcaaaccattcaaggacgctttgaaccgagctgtattaacagat
atgagatcgaaaaatgataaagttacagaagctgtactggtagtagaattaatctacaaa
caatcgctgtacggatatgcaggcgaggacttggtgccttttataaaaatcacggtcgcc
ctgccaaagcttgtggctccgtgtaaacgcttgttggagaaagaaatgatctttccaaca
ttcagcgatcacgtgtaccaagcctttgaaactaacatcgagtttgatatcagatttatg
gtggatacgcacgtggtaggctgttcatggatcaagctagtccctggtaaatggaaatta
agaggccatccagggaatgacttgcctttgactagccgttgtcaattggaagttgacgtt
gcctgggacaatttcattgctcatccaccagaaggagaatgggccaaagttgcgcccttc
agaatactaagttttgatattgaatgcgctggacgcaaaggaattttccctgaggcaaat
cacgacccagttattcagattgcgaacatgttgataagacatggagacaccgaacccttt
ttgcggaatgtattcacattggatacttgcgcgccaattatcggttctcaggtacttagt
tttcaaaaggaagcagtcatgctggagaaatgggcagactttgtaagacagtgcgacccc
gatatatttaccggctacaacatcaacaacttcgactttccctacctgataaatcgagca
cagcacctgaaagtgaattccttcagctaccttggaagaataaaggatataaaatctgtg
ataaaagatcaagtgttacaaagtaaacaaatgggcaggcgagaaaataaacatgtcaat
ttcgaaggaagagtgccgttcgatttattgctggtcctcattcgagattacaagttacgg
tcgtatacgttgaacgcggtaagttatcactttctccaagaacagaaggaagacgtacat
cacagtattatcagtgatctacaaaatgggaatccgcaaacacgcagaagacttgcggtt
tactgtttgaaagatgcctacttgcctttgaggctactggataagctcatgtgcattatc
aactacatggaaatggcaagagtgacgggtgtctcactctgctgtttactaaccagagga
caaggggtcaaagttgtttcacagctgttgcgaaaagcgcaagagaaaggctatctaatg
ccaacgcatcagagtcagggaagtgacgaacaattcgaaggagcaacagtcatagagcca
aaacgtggatactacaatgatccgattgcgacattggattatagttctctatacccgagc
ataataatggcccataatctctgctacacaacgttactacttccagcaactcaacacaaa
ctgaaactaacgaatgacaagttttcacaaacaccaactaacgccatgttcgtcaagtcc
tcagttagaaaaggactccttccagaaattttagaaaatttattgaatgctagaaaatta
gctaaaacagagctaaagaacgaaaccgatccattcaaacaaaaagttttggatggacga
cagttggctctgaaaatatcagccaattctgtttatggtttcaccggagcacaagtaggc
aaattgccttgtctggaaatatctagcagtacgacagcttacggtcgtgcaatgatagag
cgaactaaacaagaagtggaacaaaaatactgcattgcaaacgggtacaaacacgacgct
gttgtgatatatggcgacacggattccgtgatggttaagtttggtgtaaaggatatggcg
gaggcgatggagcttggaaaggacgcagctgacttcgtttcgtcaaagttcataaaacca
atcaagctggaattcgagaaaatttattttccgtatctattgataaacaaaaaacgatac
gcaggtttattattcactaagccagataaatacgataaaatggactgcaagggattggaa
accgtgagaagggacaactgtccgttggttgccaacatgatgaacacttgtttgcagaaa
ttgttgatagatagagatccggatggggcgacagactacgcgaaacaaatcataagtgat
ctcctctgcaaccgtatagacatttcgcaacttgtgataacaaaggaacttacaaagact
gaatacgcggccaaacaggctcacgttgagttggcggcaaaaatgaagaagcgagacgca
ggaacggctccgaaactcggcgacagagttccgtacgtttttacgtccgccgcaaaaggg
acaccggcatatctgaaagcagaggatccgatttacgtcctcgaaaacagcattcctata
gactcaaattactacctggaaaaccaactgtccaaacctcttctcaggatatttgaacct
attcttggagacaaagctgaatctctattactgaggggagaacatacccgcaccaaatct
gtagcgacttcacgtgtcggagcattggccgcatttacgcaaaagaaggaaacttgtatg
gggtgtaaagccatcatgcccgcagggcgagagcacatggctttatgccagcactgtgaa
tctcgcgaacctgaacttttccaacacgaattattactcggcaggaagttggaggaaaaa
ttctgcagattgtggacagagtgtcaaagatgccagggtagtttgcatcaggaagttttg
tgcaccagccgagactgtccgattttttatatgaggaaaaaagttaggattgaactggat
gcacaggagaagcgaattgacagattcgggattccagcctggtag
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integrated database retrieval system
