Neodiprion lecontei (redheaded pine sawfly): 107218180
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Entry
107218180 CDS
T09006
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107218180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nlo03041
]
107218180
03009 Ribosome biogenesis [BR:
nlo03009
]
107218180
Enzymes [BR:
nlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107218180
Spliceosome [BR:
nlo03041
]
Complex A
U1 snRNP components
U1 related factors
107218180
Complex B
107218180
Ribosome biogenesis [BR:
nlo03009
]
Eukaryotic type
Pre-60S particles
Helicases
107218180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
107218180
NCBI-ProteinID:
XP_015511447
EnsemblRapid:
ENSNLCG00000011914
UniProt:
A0A6J0BCL6
LinkDB
All DBs
Position
5:complement(29010872..29017200)
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AA seq
572 aa
AA seq
DB search
MINNRIFVTRRTIDVAAAVLGFLPTTYGGSTSGYRSGGGRGGGGGGQRNGYGGGGGGGSS
SSGRFGSRGGGGGGSSRGGGGGRGGSSLRKPNWDYENLKPFKKDFYVPHSNVSSRLPREV
EIYRGDKQITLKGDSIPNPIQYFEEGNFPDYVMQGIRKQGFAEPTAIQAQGWPIAMSGRN
MVGIAQTGSGKTLGYVLPAIVHINNQQPLNHGDGPIALILAPTRELAQQIQTVATEFGSL
SYVRSTCIFGGAPKGGQARDLERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADRM
LDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRNLAEEYLTDYTQLNIGSLTLSANHNI
LQIIDVCQEHEKETKLGSLLQEIGNVNDDGGKTIIFVETKKKVENITRNIRRYGWPAVCM
HGDKSQQERDYVLREFRNKKGSILVATDVAARGLDVDDVRYVINFDYPSSSEDYIHRIGR
TGRSQSTGTSYAFFTPQNGRQAKDLVNVLQEANQVINPKLSELASRSGGGGGGGYGGRNR
WGYGGGRGRENNYSGGSKRFDTGRSNGYNNYN
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgatcaataaccggattttcgtcactcgacggacaatcgatgttgctgctgctgttctt
ggcttcttgccgacgacctatggtggatcaactagtggataccgtagtggaggtggtcgc
ggaggaggtggcgggggtcagagaaatggttatggtggtggcggcggaggtgggagcagt
agcagtggtcgttttggcagcagaggaggaggtggaggtggcagtagccgtggaggcggt
ggaggtcgaggaggcagcagtctgaggaaaccaaactgggactatgagaacctgaaacca
ttcaaaaaagacttctatgttccccactctaacgtatccagccggctgcctcgcgaggtg
gaaatttacagaggagacaagcagatcaccctcaagggcgacagcattccaaaccctatt
cagtatttcgaggaggggaattttcctgactatgtaatgcagggaattagaaagcaggga
tttgcagaaccaacagcaattcaggctcagggatggcccattgccatgtctggacgcaac
atggtcggcatcgctcaaactggatcaggaaaaactctaggttacgttctcccagccatt
gttcatatcaacaatcagcagcctctgaatcacggtgatggacccatcgctctgatcctt
gcaccgaccagagaactcgcgcagcaaattcagacggttgctacagaattcggctctctt
tcctatgtcagaagcacgtgcatatttggtggagcacctaagggaggccaggctcgggac
ctggagcgaggggtcgagatttgcattgccactcctggtcgcctgatagattttcttgaa
aggggcactactaatttacgcagatgcacgtacttggtattagacgaagctgacagaatg
cttgatatgggatttgaacctcaaatcagaaaaatcattgagcagatcagacctgacagg
caagtactgatgtggtctgcaacttggccaaaagaagttcgcaaccttgctgaagagtat
ttaactgattacacgcaactgaatatcggctcgctcacactttctgcgaaccacaacatt
ctgcagattatcgatgtttgccaagagcatgaaaaagaaaccaaattgggaagcctgctg
caagaaattggaaacgttaacgacgatggcggaaagacaattatatttgttgagactaaa
aaaaaggttgagaacatcacaagaaacatccgcagatacgggtggccagcagtatgtatg
catggcgacaaatcgcagcaagagcgtgattacgttctcagagagtttagaaacaagaag
ggttcaatccttgtagcgacagatgttgctgcgcgtggcctggatgtggatgacgtaagg
tacgtgatcaatttcgactacccgtcatcgtcagaagactacattcacagaatcggtaga
acgggccgatcgcaaagtacaggaacaagctacgctttcttcaccccacagaatggcaga
caagccaaggacttggtcaatgtacttcaagaagctaatcaggttatcaatcccaaacta
agcgagctggcttcgcgaagtggtggcggcggcggcggaggatacggaggcagaaatcgt
tggggatatggaggcggacgtggacgagagaataattattctggcggtagcaagcggttc
gatacgggccgcagcaacggttataacaattacaattga
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