Neodiprion lecontei (redheaded pine sawfly): 107218209
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Entry
107218209 CDS
T09006
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107218209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlo03400
]
107218209
DNA repair and recombination proteins [BR:
nlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
107218209
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GFIT
Motif
Pfam:
Ku
Ku_N
VWA_2
Ku_C
Per3-like_PAS-A
DUF5748
Motif
Other DBs
NCBI-GeneID:
107218209
NCBI-ProteinID:
XP_015511496
UniProt:
A0A6J0BB68
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Position
6:25296176..25299844
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AA seq
586 aa
AA seq
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MPPKSKNKEYLIILVNIGCTDETENENETSFFEKSKQVIQLLIKKKIFLRPKDEVGIVLM
GASETKNKLLFDNIVEMNSLQVPNWNLVENVINLKCTKEKTNWVDGITVALDYIKRECVE
ANAARKLVLLTDFKEDPTIIRQYDVDNVVSDINEAYIDLLAITNNSLNADLEIELNPSEE
VFANVCKMVEGKILTIDDTLPKLMIYKDHPKKAAAWEVDMDLFDIKIPVIFYLKTTEDFK
LPKWQKFTESQTAKFPVQKERTLVDKNKDEIDEENTITGTMYGRKFIPLSDEDKAMSKYQ
SGPKSLMVYGFTKERRVRLDYLAGKGSHIVVPKLQWASPFYSLVKAMMDRETVAIVRRVY
RNNLAPKMGVLIPKIDVPGQLWCLVYIELIFAEDRRILQPKPITSTLNELSDAQKEAVDD
LIDSMMLATVENNSMDERQEPFEAGTVNHVSRQYIWDVLAHRALYRDDPLPPMSDFLQKF
FEPPQSVQLRSKRPLKDIKTLFPIKAVEKKKNFKKRYEGGPDDLREPFESVDRSTQDLNA
TTTEKSVDRIAEDSEMEEAQLSLIAEAVEAASQSMDVDLEELAKSM
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaagagtaagaataaggaatatttaataatattagtcaacattgggtgcact
gacgaaacggaaaatgaaaatgagacaagtttctttgaaaaatcaaaacaggtgatacaa
ctgttaattaaaaaaaaaatttttttgcgtcctaaagatgaagtgggtattgtactaatg
ggtgcatctgaaacaaagaataaattattatttgacaacattgtggaaatgaattcctta
caagtacctaattggaatttagttgaaaatgtcataaatttgaaatgtactaaagaaaag
actaattgggtagatggtatcacagtcgcacttgattacataaaaagagaatgtgtggaa
gcgaatgcagcacgaaaattggttttattgactgattttaaagaagatcccactattatt
aggcaatacgatgtcgacaatgttgtcagtgacataaatgaagcatacattgatttatta
gcaataactaacaactcgttgaatgcagacttagaaatcgagttaaatcccagtgaagaa
gtttttgctaatgtttgtaaaatggttgaaggcaaaatattgacaatagacgatactcta
ccaaaattgatgatttataaggatcatccgaaaaaagcagcggcttgggaggtcgacatg
gatttatttgatattaagattccagtaattttttatttgaaaacaacagaggatttcaaa
ttacctaaatggcaaaaattcacggagtcgcaaactgcaaaatttccagttcaaaaagaa
cgtactttggtggataaaaataaggatgaaattgatgaagagaatacaattactggcacc
atgtacggacgaaaattcataccattgtcagatgaagataaagctatgtcaaaatatcag
agtggaccaaaaagcttaatggtttacggttttacaaaagaacgccgtgtcagactcgat
tatttggcaggcaaaggctcacacattgttgtgcctaaactacagtgggccagtccattt
tactcattggtaaaggcaatgatggaccgtgaaacagttgctattgtcagaagggtatat
agaaacaatttagcaccgaaaatgggtgtgctgattccaaaaattgatgtcccggggcaa
ctttggtgtctggtatacattgaattaatttttgctgaagatcgaaggatattacaacca
aaacctataacgtctactctgaatgaattatcggatgcacaaaaagaagctgtggatgat
cttattgattcaatgatgctggcgacagtagaaaacaattccatggatgagaggcaagaa
ccgtttgaagcaggcactgtcaatcatgtctcgaggcagtatatatgggatgtgttggcc
catagagcattgtatcgagacgatcctttaccacctatgtcagattttttgcaaaaattt
tttgaaccgcctcagtctgtacagttgagatcaaaacgaccattaaaggatatcaaaaca
cttttccccataaaagctgttgagaaaaaaaaaaatttcaaaaaaagatatgaaggaggg
ccagatgatctgagagaacccttcgagagtgttgatcgtagtacccaggatttgaatgca
acgacaacagaaaaaagtgtcgatagaattgcagaggactcagagatggaagaagcacag
ttgtctctaattgcggaagctgttgaagcagcctcccaatcaatggatgtagacttagag
gaactggctaaaagcatgtag
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