Neodiprion lecontei (redheaded pine sawfly): 107218261
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Entry
107218261 CDS
T09006
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X2
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107218261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlo03400
]
107218261
DNA repair and recombination proteins [BR:
nlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107218261
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Rad54_N
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
107218261
NCBI-ProteinID:
XP_015511570
UniProt:
A0A6J0B9B6
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Position
1:complement(23068054..23073300)
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AA seq
739 aa
AA seq
DB search
MRSSAPSQKGKRPGEFSPLQPRSTIPQREKRLKTELKEIKISRKPLVQLSIAVTPESLSE
HEERIRKLLNRPFKIPIPGYQLSNRSLGMRMLGPRTPLHDPDEANALVVYTPPELSEHDK
LKLDTTKQLVHVVVDPALCNILRPHQREGVKFMYECVTGKRIENAYGCIMADEMGLGKTL
QCITLLWTLLKQGPEAKPLIEKAVIVAPSSLVKNWYNEIHKWLGRRVNPLAIDGGSKTDI
DNKLKGFMKTYGRRCANPILIISYETFRLHAHVLHQDDVGLVLCDEGHRLKNSENQTYQA
LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKFEIPILKGQDAGATD
SERQRAQECLQELVTIVNKCLIRRTSALLSKYLPVKHEMVICVKLNKLQTQLYQNFIKSD
SIRKSMQGDEFGTGKKGSLSALSAITLLKKLCNHPDLVYEKILEKSEGFENAAELLPPNY
SLKDVLPELSGKLMVLDCLLALVKSTTTDKVVLVSNYTQTLDLFEKLCRKRTYRYVRLDG
SMTIKKRSKVVDSFNDPNSGDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA
RVWRDGQKKPCFIYRLLCTGTIEEKIFQRQAHKKALSSTVVDQEDDVARHFTLSDLRDLF
TLEENTTSDTHSKFKCKRCVNGVEVRGPPEGTDCNSDLSDWRHANNPRHLPDLPLRQCWA
SGISFVFHHRSHELVKAEE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagatcaagcgctccaagccaaaaaggcaaacgacctggagagttttctcctctccag
ccacgctccaccataccacaaagagagaaacggttgaagaccgagttgaaagaaattaaa
atctcacgtaagccactcgtacaactgtcaattgccgttactccagaatcattatccgaa
catgaggagagaatacgaaagttattgaaccggccgtttaaaattccaattcctggttat
caactctctaacagatctcttggtatgcgtatgttgggacctcgaacaccgctccacgat
cctgatgaggctaatgcattggttgtttacacaccacctgaattatctgaacacgacaaa
ctgaaactagacacgaccaaacaacttgttcacgtagtagttgacccagctctgtgtaat
atattgcgacctcatcaaagagaaggtgttaaatttatgtatgagtgtgtaaccgggaaa
cggatcgaaaatgcttatggctgtataatggctgatgaaatgggtcttggtaagactctg
cagtgtattacattgttgtggactttgctgaaacaaggaccagaagctaaaccacttatt
gaaaaagctgtgatagtggcgcctagttctctagtaaaaaattggtataacgaaatacat
aagtggcttggcagacgagtgaatcccttggccattgatggtgggagtaaaacagacatt
gacaacaaattaaaaggatttatgaagacctatggacgtagatgtgcaaacccaattttg
ataatcagctatgaaacgtttcgtttgcacgctcacgttttacatcaggatgacgttggt
ttagtattgtgtgatgaaggtcatcgtttgaaaaacagtgaaaatcaaacttatcaggca
cttatgggtttaaaagcaaaaagacgtgtattactcagtggaacacccattcaaaatgac
ctactcgagtacttctcactggttcattttgtgaatcaaggacttcttggaactgcccag
gaattccgtcggaaatttgaaatcccgatcctgaaaggtcaagatgctggagcaactgac
tcggagcgccaaagagcgcaagaatgtcttcaagagctggtaacaatagtaaacaaatgc
ttgataagacgtacaagtgcgctattgtcaaagtatttacctgtgaaacatgaaatggtc
atttgcgttaaacttaacaaattgcaaactcagttgtatcaaaatttcatcaaaagcgac
agtatcagaaaatctatgcaaggtgatgaatttggcactggcaagaaaggtagtctttca
gcattgtccgctattacactactcaaaaaactttgtaatcatcctgatctggtgtacgaa
aaaattctggaaaagtctgaaggattcgaaaatgctgcagaacttctacctccaaactat
agtttaaaagatgtcttgccagagctgtctggtaaattgatggtcttggattgtttactg
gcgttggtaaagtcaactacaacggataaggttgtgttggtatcaaattatacacagacc
ttggacttatttgaaaagttatgtcgaaagcgtacatatcgttatgttaggcttgatgga
tcgatgactataaaaaagagatccaaagtcgtagatagtttcaatgatccaaacagcggc
gattttatattcatgctgagttctaaggcaggcggatgtgggcttaatttgattggcgca
aaccgactagttatgtttgatcctgactggaatcccgccaacgatgaccaagctatggcc
agagtttggagagacggacaaaaaaagccttgcttcatttatcgcttgctttgtactggt
acaatagaagaaaagatattccaaagacaggcccacaagaaagcattaagttcgactgta
gttgaccaagaagatgatgtggcgaggcactttactttaagcgacttgcgcgatctattc
acgttggaagaaaacaccacatctgatacccattcaaaattcaagtgcaagaggtgcgta
aatggagtggaggttcgcggcccacccgaaggaacagactgcaattctgacttgtcggat
tggagacatgccaacaatcctcgtcatttacccgatctgccacttcggcagtgctgggct
agtggcatatcctttgtattccatcatcggtcacacgaactcgttaaagccgaagaatga
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