Neodiprion lecontei (redheaded pine sawfly): 107218291
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Entry
107218291 CDS
T09006
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03420
Nucleotide excision repair
nlo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107218291
09124 Replication and repair
03420 Nucleotide excision repair
107218291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nlo04121
]
107218291
03400 DNA repair and recombination proteins [BR:
nlo03400
]
107218291
Ubiquitin system [BR:
nlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
107218291
DNA repair and recombination proteins [BR:
nlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107218291
TCR (transcription coupled repair) factors
Cul4-CSA complex
107218291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Lgl_C
Motif
Other DBs
NCBI-GeneID:
107218291
NCBI-ProteinID:
XP_015511605
UniProt:
A0A6J0B9E7
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Position
7:complement(1315826..1321954)
Genome browser
AA seq
1140 aa
AA seq
DB search
MKIMAHHYVVTAQKPTAVTACVTGNFTSPTDLNLILAKNMRLEIHLVTPEGLRPLKEVGI
YGKIAVIKFFRPPHEKKDLLFLLTTRYNAMILECIGEGEDIEIITKAHGNVADRIGKASE
TGIKAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMEELQVQDVNFLHGCSNPT
LILIYQDINGRHVKTHEISLRDKEFVKIPWKQDNVEREAMMVIPVPSPICGAIIIGQESI
LYHDGTTYVAVVPPVIKQSTITCYTKVDNQGLRYLLGDMAGHLFMLFLEQEKKADGTMVV
KDLKVEVLGEISIPECITYLDNGVIFIGSRLGDSQLVKLVTKADENGSYCVPIEIFTNLA
PIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGIKGMWALKMGG
SSCDNTLVLSFVGQTRILTLNDEEVEETEIPGFVSDEQTFHTGNVTAETFIQITPTSARL
ISNTANPIVSEWKPENNRTISVVACNGTQVLCATGNDLFYMEIVSSQIVPKGSVALQHEV
ACLDISPLDGNLEAKIVAVGLWTDISVRILTLPDLEEMNKELLGGEIIPRSILMTCFEGN
TYLLCALGDGSMYYFTLQKQNGILSDKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI
YSSNHKLVFSNVNLKEVNHMCSLNAEAYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGE
SPRRIAYQETSQTFGVITMRVDMQESSGVSIVRSSASTQVASTSSSSHIASHNKPGHTAS
DIGQEIEVHNLLIIDQHTFEVLHAHTLRPTEYAMSLISTKLGEDPTSYFVVGTAFINPDE
SEPKTGRILLYHWNDGKLTQVTEKEIKGACYSLVEFNGKLLASINSTVRLFEWTAEKELR
LECSHFNNIIALFLKTKGDFVLVGDLMRSLTLLQYKTLEGSFEEIARDYSPNWMTSIEIL
DDDTFLGAENCFNLFVCQKDSAATSEEERQQMQEVGQFHLGDMVNVFRHGSLVMQHLGES
STPTQGCVLFGTVGGAIGLVTQIPSGFYDFLHNLEDRLTTVIKSVGKIEHSFWRSFNTDL
KMEPCEGFVDGDLIESFLDLSRDKMAEVAMGLQIDDGSGMKKDATVDDLVKIVEDLTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatggcccatcactacgtagttacggcccaaaagccaactgcggtaacggct
tgcgtgaccggtaacttcacatctccgaccgacctcaacctcattctggcaaagaatatg
cggctcgagatccacctcgtcacccccgagggtctgcgacccctcaaagaagtcgggatc
tacggaaaaatcgccgtaatcaagttcttcagaccgccgcacgagaagaaggatttgcta
tttctcctgacaactcgatacaacgccatgatactcgaatgcataggcgaaggcgaggac
atagagataataacaaaggcacatgggaacgtagcggacagaattgggaaggcttcagaa
acaggaataaaggcggtgatagacccaaaggcacgagtaataggactgagactctatgat
ggattattcaagataatacctctggacaaggacaacccagagcttaaggcatcttcgatt
agaatggaggaactgcaagttcaggacgtaaattttctgcacggctgctcaaacccaacg
ttgattctaatctatcaggacataaatgggcggcatgtcaaaactcacgagatatcgctg
agagacaaagagttcgtaaaaataccctggaaacaggataacgtcgaacgagaagctatg
atggtgattccggtcccctcgcccatttgcggtgcgatcataatcggccaggagagcatc
ctctaccatgacgggacaacgtacgtcgcggtagttccgccggtaataaaacagagtaca
atcacatgctacaccaaggtcgacaaccaggggcttcggtatctactaggagacatggca
gggcatttgttcatgctgttcttagagcaagagaaaaaggctgacgggacaatggttgtc
aaggacttgaaagtcgaggtactaggtgagattagcatccccgagtgcatcacttacctc
gacaatggtgtcattttcatcggcagccgtctaggtgactcgcagctcgtcaagctggtc
acaaaggcagatgagaacggctcctactgcgtgccgatagagatattcaccaacttagcg
ccaatcgtcgacatggctgtcgtagacctggagcggcagggccagggacaaatggtcacg
tgttcgggtgccttcaaagagggatctctgaggataataaggaacggaattggtattcag
gagcatgctagcatagatctgcctggcataaagggcatgtgggcactgaagatggggggg
agcagttgcgacaataccttggtgctttcatttgtcgggcagacacggatactgacactg
aatgacgaggaggtggaagagaccgagattcctggcttcgtttccgacgaacagaccttc
cacacaggcaatgtgacggccgagactttcatccagataacgccgacctccgccaggctg
atttccaacaccgcaaatcccattgtgtccgagtggaagcccgagaacaacaggaccatt
agcgttgtcgcgtgcaatggtacgcaggtcctctgcgccactggaaatgatttgttttac
atggaaatagtgtcctctcagatcgtcccaaaagggtcagtcgctctgcagcacgaggtt
gcctgtctggacatttccccgctggacggaaacttagaggctaagatcgtggctgtcgga
ctgtggactgacatatcggtgagaattctcaccctgccggacctcgaggaaatgaacaaa
gagctcctaggtggggaaataatccccagatcgatcctgatgacctgcttcgagggaaac
acctatctgctatgcgcgctaggtgacggcagcatgtactactttacgcttcaaaaacag
aacggtattctgtccgacaagaagaaggtcaccctcggcacacagcccacggtcctgagg
acattcagatccctttcgacgactaacgtgttcgcctgctctgatcgtcccacggtgata
tattcttcgaaccacaagctagtcttcagcaacgtcaacctgaaggaggtgaaccacatg
tgttcgctcaacgccgaggcttacccagacagtctagccctggccacggacagcactgtt
acaatcggtacgatagatgaaatccagaagctccacataagaacggtgccactcggcgag
tcaccaagaaggatcgcgtaccaggagacttcgcagactttcggtgttatcacgatgcgg
gtagacatgcaggagagcagcggtgtcagcattgtcagatcgtccgcatccacacaggtt
gcgtcaacgtccagtagcagccacatagcgtcgcacaacaagcctggacacacggccagt
gacattgggcaggagatagaggtccataatctactgataatcgaccaacacactttcgaa
gttctccatgctcacacgctgaggccgaccgaatacgcaatgtcactgatatcaacgaag
ctcggtgaggacccgacttcgtacttcgtcgttggtaccgccttcatcaatccagacgag
tccgagccaaagacaggaaggatactgttgtaccactggaacgatggcaagctgacgcag
gtcacggagaaggagataaaaggcgcttgctactcactggttgaattcaacggcaagttg
ttggccagcatcaacagcaccgtaagattgttcgagtggaccgccgagaaggagctcaga
ctggagtgcagccacttcaacaacatcatcgcgctcttcctcaagaccaaaggggacttt
gtgctcgtcggcgatctaatgcgctcgctgacattgcttcagtacaaaacgctagaaggc
agttttgaagagatagctagagactacagtcccaactggatgacaagcatcgagatactg
gacgacgacactttcctcggagctgagaactgcttcaatttgttcgtctgccagaaagac
agtgcagctacttctgaggaggagaggcagcagatgcaggaagtcggacagttccacttg
ggcgatatggtgaacgtctttagacacggttccctggtcatgcagcacctgggagaatcc
agcacaccgactcagggctgtgtcctgttcggaacggtgggcggcgccatcggtctcgtt
actcagattccatcaggcttctacgattttctgcacaatttggaagatcgtttgacgacg
gttataaaaagtgttggtaaaatagagcatagtttctggaggagcttcaacacagatttg
aagatggaaccctgcgagggctttgtcgatggtgatctaatcgaaagcttcctcgacctg
agccgcgataaaatggccgaagttgccatgggcctccagatcgacgacggcagcggaatg
aaaaaagacgcgacggtggacgatctcgtgaaaatcgtagaagacctaacgaggatacac
tag
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integrated database retrieval system
