KEGG   Neodiprion lecontei (redheaded pine sawfly): 107218627
Entry
107218627         CDS       T09006                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
nlo  Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03018  RNA degradation
nlo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107218627
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107218627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nlo03019]
    107218627
   03041 Spliceosome [BR:nlo03041]
    107218627
Messenger RNA biogenesis [BR:nlo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107218627
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     107218627
Spliceosome [BR:nlo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    107218627
SSDB
Motif
Pfam: LSM Gemin6
Other DBs
NCBI-GeneID: 107218627
NCBI-ProteinID: XP_015512038
UniProt: A0A6J0BE99
LinkDB
Position
1:complement(39229415..39230672)
AA seq 113 aa
MSTANKNQNAHTDHKEKKRKESILDLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLD
NTTEYLRDPDDPYKLNQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQQDG
NT seq 342 nt   +upstreamnt  +downstreamnt
atgtctactgctaataagaaccaaaatgctcacactgatcacaaggagaagaaaaggaag
gaaagtatattggatctctccaaataccttgagaagaacataagggtaaagtttgccgga
ggcagggaagctgcaggaattctaaaaggatatgatccgctcctgaatcttgttttagac
aacacgactgaatatcttagagatccagatgatccctacaaattgaatcaggatacaagg
atgctggggttagttgtatgccgaggaacgtcggttgttctaatatgtccagtcgatgga
atggaatcgatacagaacccattcattcagcaagatggttaa

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