Neodiprion lecontei (redheaded pine sawfly): 107218648
Help
Entry
107218648 CDS
T09006
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107218648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlo03036
]
107218648
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
107218648
INO80 complex (yeast)
107218648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
107218648
NCBI-ProteinID:
XP_046593667
LinkDB
All DBs
Position
4:complement(27039303..27076378)
Genome browser
AA seq
1599 aa
AA seq
DB search
MIKENQSLQIPVMSEEVHTMGLEAEIAPPLHLQRLERSLNVQPFLNEINELFQDRVSDDD
KTDDSDSSDESEDYLNDVVSRKEDERIDKLRLYNMSSVGEERRWLQDILLSDSSDSSVSE
SDTDGPITEEDFQDMLKFHILRKKYQGRFYQKPENIQYQYYGAGLLSSYDKFPEHQKLII
GNKKKKEKKPEKRVMKFKKEKTVRHRATNEYKEHDYPEDDWERVVPKEDELDEAEIDALI
QHQPRQRCRKKHNNKSPEVMAIRRRKIWIMMSKKELGKVQRAKTNNHKEMLISCKKVAQH
CMKYCRQKAMQSQKNMKETIWRAKRLTREMQSYWKRYDRVERETRRRLEKEAEEQRKMDV
ELIEAKRQQRKLNFLITQTELYAHFMSRKLGKASPEEQLRILNQLDEEKNPRLIGLDDYD
CELMKHKAKKNAVEAFDSERARTRQFDTAAAAQELRLSETPETLEHPQPAIFQGNLKGYQ
MKGMNWLANLYDQGISGILADEMGLGKTVQSIAFLCHVAEKYSVWGPFLIISPASTLHNW
QQEMARFVPDFKVVPYWGNPQERKILRQFWETKDLHTKEASFHVVITSYQLVITDYKYFN
RIKWQYMILDEAQAIKSTSSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTL
FDSHDEFNEWFSKDIESHAENKTGIDEKHLSRLHMILKPFMLRRIKKDVENELSDKIEIM
VYCPLTTRQKLLYMALKKKIRIEDLLHYTVGGADAVPNDKNFTSNLMNLVMQFRKVCNHP
ELFERRDAKSPLFLNVESYEMPALVYNEGLVNTSLLSKAHLLFNKLCIFATEYIHRSLHQ
ETENPTDTCFSFTRFIGLSPMELNKIFVAGILFRWAYTVAMKNKTQVKRYWEDWWVDDKR
IPPTNLTILVSSKLDTNSNVIDGLIFTKDISRGEAFYTHATHSIHSMPETIAHRILRSSK
QLSSQLIKWPLVSLKTEYGEDTKLPLLPEHPHKPRSPITRPLQRTTLPAFVCDNNPKIQA
SPRKLYVSSSSAASAWRRHEECGGVIGQRMLWLGCERALLCPPHSMSMGSRIAVPSTFSY
NPPGGLLACTPINGWSNIIIPDKQTLVTDAGKLSVLDSLLRRLKEQGHRVLIYSQMTKMI
DLLEEYMYYRKHTFMRLDGSSKISDRRDMVADFQKRADIFVFLLSTRAGGLGINLTAADT
VIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVIS
GGNFKPDTLKPKEVVSLLLDDEEIEAKYSQRSEERKQHMEEIRHTEPTSHKEKDRKRKLA
SLPVKNDSKRSHLEDGVIVDEASDIFDDSAPASPARSEVSQGSAYIPQDDTSNEGLVVDV
DGPVSTPVHHPQVHATLPTPGPIEPPKVSRLTHHFTFAGSVGSRVRPAGRGTNKRGRPRG
SRRGGPIGGKGRGLLLLQPPASQSSTAPQGDAAANLTSVQSPHGSSVPVPADGDGPSSVG
PLGPVAPLLTRGGGATVRRGPGRPRLRPTGPGNQGYRGHGSHHHAKRAQRPLPVPLRSHQ
LAALPPRTSAPSSSQTPTSSESRPFGFYTQHQRTPPRGS
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgataaaggagaatcaatctttgcaaataccggtaatgagtgaagaggtccacacaatg
gggttggaagctgaaatcgccccgccgttacatctgcagcgactagagcgcagtctaaat
gttcaaccttttttaaacgaaatcaacgaattgtttcaagatcgcgttagtgatgatgat
aaaacggatgactcagactcatcagatgaatctgaagattacctcaacgatgtagtctcg
cgtaaagaagatgaaagaatcgacaaacttcgcttatataatatgagcagtgttggcgaa
gagcgaagatggctgcaggacattttacttagcgactcatcagacagttctgtgtctgaa
tcggatacagatggtccgattacggaagaagattttcaggatatgttaaaatttcacata
ttgcgtaaaaaatatcagggtcggttttaccagaagcctgagaatatacaatatcagtat
tatggtgctggtttattgtcgagctacgataaatttccagagcatcagaaactcattatt
ggcaataaaaagaaaaaagagaaaaaaccggaaaagagggttatgaagtttaaaaaggag
aaaactgttcgtcacagggcgacaaacgaatataaagaacatgattatccagaagatgat
tgggagcgtgtagtaccgaaagaggatgaattggacgaagctgaaattgatgcactgatt
caacatcaaccgcgacaacgatgtagaaaaaaacacaataacaaaagtccagaggtaatg
gcaattaggagaagaaaaatttggataatgatgtcgaaaaaagaattgggaaaagttcaa
agagcgaaaacgaataatcataaagaaatgttaatcagttgtaaaaaggttgctcagcac
tgtatgaaatactgcagacaaaaagccatgcaaagccagaaaaacatgaaggaaacgata
tggcgtgctaaaagattgactagagaaatgcagtcttattggaaacgttatgatcgtgtt
gaaagagagactagacggagattagaaaaggaggccgaagagcagcgtaaaatggatgtg
gaactgattgaggctaagcggcaacaaagaaagctgaattttttaattacgcaaacggaa
ctgtacgctcactttatgtcacgaaaattaggaaaggcatcaccggaagaacaactgcga
attctcaatcaattagacgaagaaaaaaatcccaggctcataggacttgacgattatgac
tgtgaactgatgaaacacaaggcgaagaagaacgcagtcgaagcatttgacagtgagagg
gcgcgcacccgccaatttgataccgcagcagccgcgcaagaacttcgtttgagtgagaca
cccgaaactctcgaacatccgcagcccgccatatttcaaggcaatctaaaaggctaccaa
atgaagggcatgaattggctcgctaatttatatgatcagggaattagcggtatcttggct
gacgagatgggtcttggaaaaactgttcaatcgatagcattcttgtgtcacgtcgctgaa
aagtactctgtctggggcccatttttaataatatctccagcttcgactctgcacaattgg
cagcaggagatggcgaggtttgttccagattttaaggtagtaccttactggggtaatccg
caggaacgtaaaatcctaagacaattttgggagaccaaagatctgcacacgaaagaagcg
tcctttcacgttgttatcacaagttatcaattggtcatcactgattacaaatacttcaat
agaataaagtggcaatatatgattctggatgaagctcaggctattaaaagcacaagcagt
atgaggtggaagcttctgcttggattcagttgtcgtaatagactgctgctgagtggtacg
ccaatccagaacagcatggccgaattgtgggccttacttcactttataatgccaacccta
tttgattctcatgacgaattcaacgaatggttttctaaggacattgaaagtcatgcagaa
aataaaactgggattgatgaaaagcatttatcgagattgcatatgatcctgaaaccattc
atgctgaggagaataaaaaaagacgtcgagaatgagctctctgataaaattgaaatcatg
gtttactgtccacttacgactcgacagaaattactttacatggccttgaagaagaaaatc
aggatagaggacttgttgcattacacggtcggtggagcagacgcagtaccaaacgacaag
aattttacatcaaatttaatgaatttagtcatgcaatttcgcaaagtctgcaatcatccg
gaattgttcgaacgaagagacgcgaagtccccgttatttctgaacgtggaaagctatgaa
atgccagcacttgtgtacaacgagggattggtaaatacatcattgctgtcgaaagctcat
ttgctcttcaacaagctgtgcatatttgcaacagagtacatacatcggtcgcttcatcag
gaaactgaaaatccaaccgatacttgtttttcgttcacaagatttatcggcctgtctcct
atggagctcaacaagattttcgtagccggtatactattcagatgggcttacacagtggca
atgaaaaataaaactcaggtcaaacggtattgggaagattggtgggttgatgacaaaaga
ataccaccaaccaatcttacgatacttgtcagttcaaaattagataccaattccaatgtc
atagacggtttgatcttcacaaaagacatctccagaggggaggctttttatacacatgct
acgcacagtattcactctatgccagagactattgctcatcgaatactacgtagcagtaag
cagctctcaagccaactcattaagtggccgttggtgtccttgaagacagaatatggcgag
gataccaagctgccgctcttgccagaacatcctcataaacctagatcacccataacaaga
ccccttcaacgtactacgttacctgcttttgtctgtgataataatcctaagatacaagct
agtccaagaaaattatatgtaagtagtagcagcgcagcgtctgcgtggcgacgccatgag
gaatgtggcggtgtaataggtcagcgcatgctgtggcttggctgcgagcgagctctcctc
tgtcctccgcatagcatgtccatgggctctcgcatagcggtccccagtaccttctcctac
aaccctccaggtggcttgttggcctgcactccaataaatgggtggtcaaatatcatcata
cctgataaacaaaccctcgtcaccgatgctgggaaactctccgttttagacagcctttta
cggcgactcaaggagcagggtcaccgtgttctcatctattcccagatgacaaagatgatc
gatcttctcgaggaatacatgtattatagaaaacacactttcatgcgactggatggatcg
tcgaagatatctgaccgcagagacatggttgccgactttcaaaaacgggctgacatattt
gtcttcttgctcagcaccagggctggcggtttaggaatcaatctcacggccgcggatacg
gttatattctacgacagtgattggaaccctaccgtcgatcagcaggccatggacagggct
cacagacttggtcagacgaagcaggtcaccgtttatcggctcatttgcaaggggaccata
gaggaacgcatccttcaacgggccagggagaagagcgagattcaacgcatggtaatcagc
ggtggtaatttcaaaccggacaccctgaagccgaaggaagttgtctctctgctactcgac
gacgaggaaatagaagcgaaatatagccaacggagcgaagagcgtaagcagcacatggaa
gagatacggcacactgagccgacgagccacaaggagaaggaccggaaaaggaagctagcc
tcgcttccggtcaagaatgactcgaagagatcccaccttgaggacggagtaatcgtcgat
gaagcctccgatatcttcgacgacagcgcacccgctagtccagctagatcagaggtgtct
cagggcagcgcttacatccctcaggacgacacgagcaacgaaggactcgtcgtcgatgtc
gacggacccgtctcgacgcccgtccatcacccccaagtccacgccaccctcccgacgccc
gggccgatcgaaccccctaaggtgtcgcgactcacccaccacttcaccttcgccggctcg
gtcggatctcgggtccgtcccgccggacgaggaaccaacaaacggggtcgtccccggggc
tcccggaggggtggacccatcgggggcaaaggacggggtctcctgctcctgcaacccccg
gcgagccagtcgtcgactgcgccccagggggacgcggcggcgaacctgacgtctgtccaa
tcgccgcacggaagctcagttcccgttccggcagacggcgacggtcccagcagcgtcggt
ccgttgggtccggtcgctcctctgctgactcgaggaggaggtgcgacggttcggcgcggt
cctggaaggccgcgcctgaggccaacgggtccgggaaaccagggataccggggtcacggg
agtcaccaccacgccaagagggcccaaaggcctcttccggtacctcttcgttcgcaccag
ctcgcggcgttaccccctcggacttcggcgccatcctcgtcgcaaacaccgacctcctcg
gagtcgcggcccttcgggttctacacgcaacaccaacggaccccaccacgtggctcatag
DBGET
integrated database retrieval system
