Neodiprion lecontei (redheaded pine sawfly): 107218727
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Entry
107218727 CDS
T09006
Name
(RefSeq) rho GTPase-activating protein 100F isoform X3
KO
K20655
Rho GTPase-activating protein SYDE
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nlo04131
]
107218727
Membrane trafficking [BR:
nlo04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
107218727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PDZ
C2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
107218727
NCBI-ProteinID:
XP_015512190
UniProt:
A0A6J0BB92
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Position
4:34530793..34557528
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AA seq
1341 aa
AA seq
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MQWRKYVRIKYGGRVGVGGPVGQGQQGQQEQRQVRVVQLQREGGRGFNYVFHQPCQPPEA
QRSCSAAAMLCCGRRKEGRGEVTDISASPGRQVPVNQLRPKEPPPMVIQGDFRKVSGIST
EIFKQIETVENDLDASTAAALEAVDRRGEMVVRVIEPRQLGRQASEAAKKFMGMQDSKHP
VHLVEIIKRPGQTLGLYIREGNGIDRNDGVFISRIALESAVYNSGCLKVGDEILAVNLVS
VSHMGIDDVVIIMSIPRRLILATRHGPHQPVSHSRQNEHKAPPVVVIKRELNEDESDHAT
SNHIRDSSRRRGDGREMLPSRSRLGLTGLGSSQDLGSSNGDLYYNSRPESHWSYQPPPPP
VITHQPKPSTTQHFQPYERGYPKTLESLAEKVHSFYTGPVMPSNSGRRMSTGGGMQSVAG
RLSGQNQTGHYGFSQHTTSGRIMPRSGSDQHLPRVDYTSITTPARHTLLRSSLKSGSSTL
RYNSRYSTQNDTGSSSQRQGQFGTLTRRHRPSLDYASDTEATCSSSPRSAYYHYRHNLNN
PSQSSAVSHLATLSRSQIGQSSSGLRSNSLPRSGRTLPQQPGVRTGLSTVTSGLIDQEDS
DGALSAPELPSIKRDRGRIPSSPSVFTSDEYRAWLSRTPSTSALYEQIRATTNRPPRYTY
SAENIHAAANQAEYGGYGSYRPMSSTLDRLSTRSASAQQVNLANLRASTAISSSCHRTSS
NPRPASVASNTRSSLSNTKTALTNSASQRASSVRRIRNLLDLESTRNIPNPTPTRTQDQR
LLDINPAEFLKYKIEKPPTVGTPSSTSSLLSSLGEGSAGGDLASGVSGLLWVHLLAGRGL
RSTTSSSAATTPSTPSGQPSLGSCGLRDLYCVLECDRVHKARTVVRTGDLMFDWDETFEL
DLVGNRQLDLLVYSWDPQHRHKLCYKGSVHLATLLKESPLHQLALKVEPRGTLYLRLRYT
DAHQTFKRRGLPVLSLATRVAPLFGVDLDTVVSRESKTGGVPGGVSTALAMSGTQNVPII
VWRCVEEVERRGLDIIGLYRLCGSATKKRILREAFERNARSVDLSPDNVPDINVITGVLK
DYLRELPEPLFTKCLYQMMVDALAVCLPDDPQGNAKLMFSILDCLPKVNRCTLIYLLDHL
AMVVSQCNKMSPASLAVCFGPVLMLHSEDNAPPLDFQQPIAVLKYLLEIWPVKSVRKISS
AASTLTRAMPQVGHSNQSGQSAQGTLGRTGLPWQQQPSHHHPPPSTTPVTLSTSTRPPPP
IKPRQVIVSSPGSPSSEESASPEPVNKGLGGLGFASSETTEQITPTSSVDTEEGNPAHPE
EGERGVEGDAEASDDDVSKMR
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggcgaaaatacgtacgaatcaagtacggtggtcgagttggtgtcggtggtccg
gttggtcaaggacagcaagggcagcaagagcagcgacaggtgcgcgtggtccagctgcag
cgggaaggaggccgaggattcaactacgtctttcatcagccttgtcaacccccggaagct
cagcgcagctgcagcgctgcagccatgctgtgctgtggccgcagaaaggaggggcggggg
gaggtaacagacataagtgcaagtcctggacggcaagtccccgtcaaccaactgcgtcca
aaggaaccaccacctatggtgattcaaggagatttcagaaaggtcagtgggataagtacg
gagatattcaagcagatcgaaactgtggagaacgatctcgatgcatcaactgctgctgcg
ctagaggctgtggatcggcgcggagaaatggtcgttcgtgtcatagagccacgccaattg
ggtaggcaggcttcggaggctgccaaaaagtttatgggaatgcaggattcaaaacatccg
gtgcatttagtagaaattattaaaaggcctggacaaactttgggtctttatatacgggaa
ggcaatggaatagacagaaacgatggtgttttcatatcaagaattgcgctggagtctgct
gtttacaacagtggatgtttaaaagtgggtgacgagattttggcagtcaacttggtcagt
gtctcgcacatgggtatcgacgacgtagtaattataatgtcaatacctcggagattaatc
ttagcgacgaggcacggacctcatcagccagtatcacatagccgtcaaaatgagcacaaa
gcccctcctgttgttgttataaaacgagagctcaatgaagatgagagtgatcatgccaca
agcaatcatattagggatagcagtcgtcgacgaggtgatggaagagaaatgttgccatct
cgatccaggctcggcctaacaggtctcggttccagtcaggatttaggatctagtaacgga
gatctctattataactctaggcccgagagtcattggtcatatcaacctcctccgccacct
gttatcactcatcaaccaaagccatcaactacgcagcatttccaaccatacgaacgtggt
tatccaaaaactctggaaagtctggcagaaaaagtacactcattctacactggacctgtg
atgccatcgaatagtggacgccgtatgtcaacgggtggcggaatgcaatcagttgccggc
agattgtcagggcaaaatcaaactggtcattacggattttcacaacatactactagtggc
agaatcatgcctcgcagcggatccgatcaacatttgcctcgtgttgattacacaagcata
actacacctgctcgtcataccttactgagatctagtctgaaatctgggtcttcgacactt
cgttacaactcacgctacagtacccaaaatgatactggatcatcttcgcaaaggcaggga
caattcggcaccttgaccagaagacatagaccttctctggattacgcttctgatacagaa
gcgacatgctctagttcacctaggtcggcatattatcactacaggcacaatttaaataac
ccttcacagagcagtgctgtatctcacttagctacactctccagatctcagatcgggcaa
agttcctcagggttacggtctaattctttaccaagaagtggcagaacattaccgcaacag
ccaggcgttcgaactggacttagtaccgttacatctggtcttatagaccaagaagatagc
gatggtgctttgtcagctcctgaactgccttctattaaacgtgatcgagggagaatacca
tcatctccgagtgtatttacgtcagatgagtacagagcatggttgagccgtactccaagc
actagtgcactttatgagcagatcagggctaccaccaatagacctccacgttacacatac
agtgctgaaaatatccatgctgctgctaatcaggctgaatatggtggctatggctcttat
cggccaatgtccagcacattggatcggctatcgacaaggtctgcgtctgctcaacaagta
aatctggcaaatttgcgagcttcgacggctatcagttcatcctgtcatcgaacatcatca
aacccacggccagcatctgtagcttccaatactcgatcatctttgtctaatacaaagact
gctttaactaactcagcaagtcaaagagccagttctgttaggagaattaggaatttgtta
gatctagagtctacgagaaatataccaaatcctactccaactagaactcaagatcaaaga
ctgctagatataaaccctgcagagttcctcaagtataaaatagaaaagccaccaacagta
ggaacccctagttccaccagctctttattgagttcccttggagagggaagtgctggaggg
gatctagcaagtggtgtcagtggactactttgggtccacttgttagcaggccgtggtcta
cgatctaccacttcatcctcggcagctactaccccatcaacaccatccggacaacccagc
cttggtagttgcggtttgagagatctgtactgtgtattggagtgtgatcgtgttcacaaa
gctcgcactgttgtgcgtacgggggatctgatgtttgactgggatgaaacatttgagttg
gatttggttggcaatcgccaattggacttactggtttattcgtgggatcctcagcataga
cacaaattatgttacaagggatcagtacatttagcaactctgttgaaagaatctccactt
catcaattggcactgaaggtcgagccacgtggtactctttatttacgccttcgatacact
gatgctcaccaaacttttaagcggcggggacttccagttctatctcttgcaacaagagta
gctccactatttggagttgatttagataccgtggtgagccgggaaagcaaaaccggaggt
gttcccggtggagtctcgacagctttggcaatgtcaggtacccagaatgttcctattatc
gtatggcgctgtgttgaagaagtcgaaaggcggggacttgatataattggcctatatcga
ttatgtggatctgcaacaaagaaaagaatactgcgtgaggcatttgagcgcaatgcaaga
tccgttgacctttcaccggataatgtccctgacatcaatgttataacaggagttttgaaa
gactatctgagggaactgccagaaccattgtttacaaagtgcctctatcaaatgatggtt
gatgcacttgctgtttgcctacccgacgatccacagggtaatgctaaacttatgttcagc
atactagattgtttaccaaaagtcaataggtgtacgctgatatatttattggatcacttg
gcaatggttgtatcgcaatgtaacaagatgtctccagcaagtttggcagtttgtttcggt
ccagtattgatgcttcattcggaagataatgcaccccccttggacttccaacaaccaatt
gcagttcttaagtatctccttgaaatatggcctgtgaagtcagttcggaagatttcttca
gccgcttcaacgctaactcgagctatgccgcaagtcggtcacagcaatcagtcgggtcag
tcggcacagggcacattgggtcgcaccgggctgccttggcagcagcaaccctcacatcat
catccgccccccagtacaacacccgtaacgctttcaacctccactcgacctccacctcca
atcaagccgcgacaggtgatagtctcatcccccggttcgcctagcagcgaagaatcagct
tctccggaaccagttaacaaaggacttggcgggttgggcttcgctagtagtgaaacgact
gaacaaataacgcccactagtagcgtggatacagaggaaggaaatcctgcacacccagag
gaaggagagcgtggtgtagaaggtgatgcggaagcgagtgacgacgatgtatcaaaaatg
cgttaa
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