Neodiprion lecontei (redheaded pine sawfly): 107218746
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Entry
107218746 CDS
T09006
Name
(RefSeq) chaoptin
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_6
Motif
Other DBs
NCBI-GeneID:
107218746
NCBI-ProteinID:
XP_015512216
EnsemblRapid:
ENSNLCG00000007852
UniProt:
A0A6J0BD14
LinkDB
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Position
4:46033..53220
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AA seq
1232 aa
AA seq
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MWLAVFALHWGLHVAWSYNVLCNFNTMCLCWVQDDADYTQMDVSCMGVPFARFPEIPIRY
VAQLDIVGSGMQVLENEALVSSYVEALGLMSNRLMLVGEKSLSGVADHLRSLDLSYNYLT
KVPLKAFRNLKKLTWLNMHSNYLTSLDGNWGHLPNTLTNVFFGDNSIAELPNCFKRFKFL
MWLNLDNNNIERIEPSALPPRIQTLSMNNNLIKEFPASIGNLKDLTWLYLRGNDMKTLVL
PHFESPKLELIDVSDNSISTINYTNSYPTLQIRDLNMASNKLSSLPARMFEKINVRRLYL
SSNDISVINVNAFEGLEETLEYLNLENNNLIVVPEAIRSMNRITYLYLANNKVSNVSDES
FLGFGNNLRALSMATNNLKYVPVGALSECNKLLHLNLGYNNILSIQPGDFEWATNLEILL
LRNNMLSKLKPETFRGANRLKELSLSFNHITELDDDAFLGLEESLEILELSFAFAMDVFP
RHALKQLRNLLWMVLDNNNFQVLDTTAFYSFQKLRYVNLESNRLQYLPEQIIHSSIHLEL
RDVKLGYNFLETIPSNTFHNLTELRSLDLSGNRIHFLTSSSISSCRKLVTVSLAQNKIAH
LSPGTFSQLESLQFLHLEFNYLGKLNLDSIHESGSDDFTLNVSFNAISSIIPGDLPTLRH
LDLSFNNITSLPGTAFNGTPNLRTLDLRGNFVTAVESGAFTLKHLEYLNLRNNKIQVLSK
QAFYGLETLQQLDLSGNSINQLMMEQFRNLKKLRVLNLARNKIRSLPRDVFEGTQIEILD
LSNNIFYVVPSTSFAEVGYTLRDLDLGNNFIDHLDSASFPTSLLNSLNLAHNRLTILPDN
SFVALGKLLTLNISHNSLQANFKELFHYLPDLRQLSLAKCSLGKVPILPLANLSVLDLSL
NSISSISNNDFQYLEELRTLRLVKNLVKFMPGVRLDHLRELDVSGNIIEELTKEMFSRYP
RLEKLNIKNLNSVRSVERDALSHLRYLKYLQVQTWPQAEGFHLRFLLSGLPLKFVEIEIK
ENVLKHQIENAFSKQLKELTITGSDLETVTSEAFSTIEGGELILRIKNTRVQRFQSDIFL
SLTKRLSQLTLDLRDNHINELSPSIIYGNLSWEAVGTNMVAGGLQVSGNPLECDCEIAWL
SLWLRRWLRESRQIHTASQSDARQLRTMAGRAVCTETKPSYSSDKVLLTLGTPHTACQAS
ALSSGHYQHGSTLHRFLGLSTIPLLVYVNILD
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggcagttttcgcacttcactggggactgcacgtggcctggtcctacaacgtc
ctctgcaactttaacaccatgtgcctctgctgggttcaggacgacgccgattatacccag
atggacgtaagctgcatgggcgtgcctttcgcgcgttttcccgagataccgattcggtac
gtagcgcagttggacatcgtgggttccggcatgcaagtgttggaaaacgaggccctggtc
agctcctacgtggaggcactcggtctaatgagcaaccgtctgatgctcgtaggggagaaa
tcgctgtccggagtggcggaccacctgagatcgttggacctgagttacaattacttaacg
aaggtgccgctcaaggcgttccgaaatttgaaaaagttgacctggctaaacatgcacagt
aattacttgacgagtttggatgggaactggggccacctgccgaacacgctaaccaacgtg
ttcttcggggacaactcgattgccgagctaccgaactgtttcaagcggttcaaattttta
atgtggctaaacctggacaacaacaatatcgagcgcatcgaaccgtccgcgctaccaccg
cgcatacaaacactaagtatgaacaacaacctgatcaaagaatttccagcgagcattgga
aatctgaaggatttgacatggctgtacctgaggggaaacgacatgaagacgttggtgctg
ccgcacttcgaaagcccgaaattagaacttatcgatgtaagcgacaactcgataagcact
atcaattatacgaatagctacccgacgctgcagatccgggacttaaacatggccagtaac
aaactgtcctcactccccgccagaatgttcgagaagataaacgtgcggcggttgtaccta
tcgtcgaacgacataagcgtgatcaatgtcaacgcgttcgagggccttgaggagaccctt
gaatacctgaatttggaaaataacaacctaatcgtggtccccgaggcgatacgctcgatg
aatcgcattacgtacctatacctggcaaacaacaaggtatcaaatgtttcggatgagagt
tttctcggattcggcaataacctccgtgccttgtcgatggccacaaacaaccttaagtac
gtgcctgtcggggcgctaagcgagtgcaacaaactgctgcacttgaacctgggctacaat
aacattttatcaatacagccgggagacttcgagtgggctaccaacctggaaatcctactg
ttgcgtaacaatatgctgagtaaattgaaaccggaaacgtttcggggcgctaacaggctg
aaggagctcagcctctcgttcaaccacattacggagttggacgatgacgcgttcctagga
ctcgaagagagcctggagattctggagctgagctttgcattcgcgatggacgttttccct
cgtcacgctctcaagcagttaaggaatctactctggatggtgctggacaacaacaatttc
caggtgctcgacacaaccgccttctactcgttccagaaactgcggtacgtcaacctggag
tcgaacaggcttcagtacctaccagagcagataatccactcgtcgatccacctcgagctt
cgcgacgtcaaactcggctataatttcctcgagaccataccatccaacacgttccacaac
ctgacggagctgcggtcactcgacttgtcgggcaaccgtatccactttctaacgtcatcg
tcgataagctcgtgccggaaattggtcacggtatccctcgcgcagaacaaaatagcccac
ctaagccccgggacgttcagccagctcgagagtctccagttcttgcacctcgagttcaac
tacttaggcaagcttaacctggactcgatccatgaaagtggcagcgacgattttaccctg
aacgtttctttcaacgccatcagctcaattattcccggggacttgcccaccctgcgacac
ctggacctgagcttcaacaacatcacgtctctgcccggaacggcgttcaacggcacaccg
aatctgagaaccctggatttacgcggcaactttgtcacagcggttgagtccggcgcattc
actttgaagcatctagagtacctgaacctgcggaacaacaaaattcaagtgctgagtaag
caggcgttttatggtctcgaaacgctgcagcagctcgacctcagcggtaacagtataaac
cagttaatgatggagcagttcagaaatttaaaaaaactccgcgtactcaaccttgcgaga
aataaaatccgttccttacccagggacgtttttgaaggcacccaaatcgaaatactcgac
ctgagtaacaacatattctatgtcgttccctcgacatcgttcgccgaggtcggttacacc
ctgcgcgacctcgacttgggaaacaatttcattgaccatctcgactcagcctcgtttcca
acctcccttctgaactctctaaatttggcccacaaccggctgactatactacccgacaac
tctttcgtcgcacttggaaaactgctcaccttgaatatttcccacaacagtctgcaggca
aatttcaaagagctcttccactacttaccggacctgagacagctatccctagccaaatgc
agtcttggaaaagtgcctatcctacccctggccaatttaagtgtacttgacctgtcgctc
aatagcatcagctccatttctaataacgatttccagtacctcgaggagctgaggactttg
aggctcgtaaaaaatctagtcaaattcatgcccggtgtcaggcttgaccatctcagggaa
ctggacgtctcggggaacattatagaggaactgacgaaggaaatgttctcaaggtaccca
aggctggagaagttgaacatcaagaatttgaatagcgttcgaagtgtagaaagggacgcg
ctgagtcacttgcgatacctgaaataccttcaggtgcagacatggccgcaggcggaggga
tttcacttgcggtttctgctcagcggtctgccgttgaaattcgtggaaatagagataaag
gaaaacgtgctaaagcaccagatagagaacgcgttttcgaaacagctcaaggaactcaca
ataaccgggagtgacttagagaccgttacctcggaggcattctcaaccattgaaggtggc
gagcttatacttaggataaaaaacacccgagtacagaggttccagtccgatatttttttg
tccctgactaaacgactctcacagctgactctggacctgagggacaaccacataaacgag
ctcagcccgtcaataatatacggaaatctttcgtgggaagcggtggggacaaacatggtg
gctggtggcttgcaggtatccggcaacccacttgaatgcgactgtgagatcgcatggctg
agtctctggctccgcagatggttgagggaatcccgacaaattcacacagcgtcgcaatcc
gacgctaggcaattacggacgatggctgggcgggccgtatgcacggagacgaaaccctcc
tattcttccgataaggtcctgctaacgctcgggacgccccacactgcctgtcaggcctct
gctctgagctctggccactaccaacacggaagtactttgcatcgatttctcggattgtcc
accataccgttactagtttacgttaatatcttggattaa
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