Neodiprion lecontei (redheaded pine sawfly): 107218869
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Entry
107218869 CDS
T09006
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107218869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nlo04121
]
107218869
03036 Chromosome and associated proteins [BR:
nlo03036
]
107218869
Enzymes [BR:
nlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107218869
Ubiquitin system [BR:
nlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107218869
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
107218869
Noncanonical PRC1 (PRC1.1)
107218869
Noncanonical PRC1 (PRC1.3/1.5)
107218869
Noncanonical PRC1 (PRC1.6)
107218869
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-Nse
zf-RING_5
zf-RING_4
RING_XB3-XBAT31
zf-RING_6
zf-rbx1
zf-UDP
zf-C3HC4_5
TRAF3_RING
Sina_RING
Motif
Other DBs
NCBI-GeneID:
107218869
NCBI-ProteinID:
XP_015512385
UniProt:
A0A6J0BBT5
LinkDB
All DBs
Position
4:complement(15788879..15791362)
Genome browser
AA seq
403 aa
AA seq
DB search
MAAAEQVGLNKTWELSLYELHRTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKTMTT
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ
ERVLAKLNKSHSQAALVNSITEGIKLQSQNRPQRSRKNANEPENANGTASYTAGNTSGRT
TPNPTANMANQSDSSQGPTGIPNNSALMVNVISNSQNHQNSTNSVSQPASSPAVSGTTSR
NSTTPSPKPAKRQKSQQNSENDSAGSSVEVETGGGESMVDTEGEGPGEPLMLNEIELVFK
PHPTEMAEDNSLIKALKENSIRYIKTTANATVDHLSKYLATRLTLDLDTELSESHRHLNF
CIYIAPSPGQLVVLSGSQTLRQVNDKFWRVNRPLEMYYSWKRT
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctgagcaagtgggtctaaacaaaacgtgggaattgtccctttacgagttg
catagaacgccgcaggacgcgattacggacaataccgagatcgccgtcagcccgaggagc
ttgcacagtgagcttatgtgtccgatatgcctggacatgctgaagaagacgatgactacc
aaggagtgtcttcaccgtttttgctctgactgcatcatcaccgcgctcaggagcggaaat
aaggaatgtccgacctgccgcaaaaagctggtttccaaaaggtcgctgaggccagatccc
aacttcgacctcctcatatcaaagatatacccgagtcgtgatgagtatgaggctcaccag
gagcgtgttttagctaaactgaacaaatctcattctcaggcagctctggtcaattccata
acagagggaattaagcttcaaagtcagaataggccgcaaaggtctcggaagaatgccaac
gaacctgaaaatgccaatggtacggcttcttacactgctggcaacaccagtggacggacg
actcccaatccaactgccaacatggctaatcaaagcgactcctcgcaaggaccaacagga
atcccaaacaacagtgcgctgatggttaatgtaattagcaacagtcagaatcaccagaat
tctactaacagcgtctcccagcctgcgagcagccctgcagtgtcaggcacaacatcccga
aattcaaccacgccttctccgaagcctgcaaagcgacagaaaagtcagcaaaattctgaa
aatgactctgcaggatccagtgttgaagttgagactggcgggggagaatctatggttgat
acggagggggaaggacccggggaaccacttatgctgaacgaaattgaactcgtttttaaa
ccgcatccaacggaaatggctgaggataattcattgatcaaagcattgaaggagaacagc
attcgatatatcaaaacgacagccaatgcaacagttgaccatctgagcaaataccttgcc
actcgattgacgcttgatttggacacggaactgtcagaatcccacagacacttgaatttt
tgcatatacatagctccatctcccggccagctggttgttctcagtggttctcaaacgttg
cgacaagtcaatgacaaattttggcgagttaatcgaccactggaaatgtattattcatgg
aaaagaacctag
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