Neodiprion lecontei (redheaded pine sawfly): 107218920
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Entry
107218920 CDS
T09006
Name
(RefSeq) probable ATP-dependent RNA helicase kurz isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nlo03009
]
107218920
Enzymes [BR:
nlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107218920
Ribosome biogenesis [BR:
nlo03009
]
Eukaryotic type
90S particles
Helicases
107218920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_19
AAA_22
ResIII
HA2_N
Flavi_DEAD
nSTAND3
ATPase
Herpes_ori_bp
AAA_30
AAA_16
Motif
Other DBs
NCBI-GeneID:
107218920
NCBI-ProteinID:
XP_015512446
UniProt:
A0A6J0BE71
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All DBs
Position
2:complement(25929474..25941500)
Genome browser
AA seq
1178 aa
AA seq
DB search
MGKKGYNWKARKVTQIEIDDTLTKKIAVDIGSQRESYDQCNALVIPSQKRKTKSKDKKIT
TTRLLSKKRRKELEKVVDRKRKKANRATLLDKLAKVQVSEEELKQYTTLAAVQTRGLKRH
FNEVDKELKPKPLTSEPEEEQIIVNAIRGAKQTRLSLLGADGKQNTQFDPNIVGFDESSD
DETKSEDDFEQPSSIVKPAEESVNAKIQRVKNDVTVNKPHTTSDKNRDKIRTDKVALNNV
DPVQRKPAVFVMLDRKPEIQTARLKLPILAEEQSIMETINDNPVVIVAGETGSGKTTQVP
QFLYEAGYAKEKMIGVTEPRRVAAISMSKRVAEEMNLSSKEVSYLIRFEGNTTSDTKIKF
MTDGVLLKEIQSDFLLNKYSVIILDEAHERSVYTDILIGLLSRIVPLRNKRKSPLKLIVM
SATLRIEDFTENPKLFKVKPPVIKVESRQFPVTIHFNKRTSQNYVKDALYKAVKIHTQLP
DGGILIFLTGQQEVNTIVRKLRKAFPLRNKKFMLKKQEAKEIQQEKEPSSNNSESDEGLD
MDRVVKNARKHRKKLKEVKLPELNLDNYAVMPPDDTEGDLLDTVENRDAEDKEEEEDDDD
DDEEEDLQNLMGLSCTQPMWVLPLYSLLPSYKQAKVFDPPPEGCRLCVVSTNVAETSLTI
PNVKYVVDSGRCKTRLYDKVTGVNAFQVCYTSKAAANQRAGRAGRTGPGHCYRLYSSAVF
NDQFEQFSMPEIQRKPVDDLLLQMKVMNIDKVVNFPFPSSPDVLQLKSAEKRLCILGALD
QSKPGKENEYCAKVTPLGYSIAAFPVAPRFGKMLALSQQHDLLQYTVCLVAALSVQEVLI
ESNPIQGVTKNQWNQTRRTWAGTGNSLLLGDAMVLVRAVGAAEYAGSKGTIVKFCEENGL
RYKAVTEIRKLRQQLTNEIVLNIPDLDLNVNPRMNPPTDTQAKLLRQILLSGMANQVARK
VSPDEVEEDHDKVKWKYAYRCLEMEDPVFMHSSSVLKKTYPEWVVYQEVYETNKIYMRGI
TAIQPEWLPKFATSLCQLSEPVSDPPPRYDSRTGKVMCHVTGTFGRGGWQLPLIEVEYPN
SLEGIKWFARFFLEGQVCPALERFASLLLSTPGTMNKTWAKLLPRTEAITKALMANQVSS
KDQLYHIWKTDSKFLLNAYQKWLPESAQNEVAILWPPL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaaaggatacaattggaaggcacggaaggtgacgcaaatcgaaattgacgat
actttaaccaaaaagatagcagttgacattggatctcaacgtgagagttatgaccagtgt
aatgctttggttatcccgagccaaaagaggaaaactaaatccaaagataaaaaaattacc
acaactcgtttgctctcgaaaaaacgtcgtaaagaattggaaaaagttgttgatcgaaaa
agaaagaaagccaatagggcaacgcttttggacaagttagctaaagtccaagtctcggaa
gaagagctcaaacagtacacaacacttgcggctgtacaaacgagaggcttaaagcgccat
ttcaatgaggtggacaaggagctcaagccaaaaccactcacgtctgagcctgaagaggaa
caaataatcgtgaatgctatcagaggagccaaacaaaccagactttctcttcttggtgca
gatggaaaacaaaatacgcagtttgatcccaacatcgtcggctttgatgaatctagtgat
gatgaaaccaaaagtgaagacgactttgagcagccgagcagcatagttaaacctgccgaa
gaaagtgtaaatgccaaaattcaacgagtaaaaaatgatgttacggtaaataaaccacat
acaacatcagataaaaaccgagataaaattcgcaccgacaaagttgcattgaacaatgtt
gacccagtgcagcgaaaaccagctgtctttgtaatgttggatcgcaagccagaaattcag
actgcacggctgaagcttcccattttagcggaagagcagtcaatcatggaaacaatcaat
gacaatcctgtggtgattgttgctggtgaaacgggaagtggtaaaacgacccaagtgcca
caattcttgtatgaagctggctatgcaaaagagaaaatgatcggtgtcacagagccaaga
cgagtcgcagcaatttctatgagcaaacgtgtcgcagaggaaatgaatctgtcatctaaa
gaagtgtcgtatctcattagattcgaaggcaacactacttctgataccaaaattaaattc
atgaccgacggtgtattgctaaaggaaattcaaagcgactttcttctcaacaaatattcg
gttattattttggatgaagcacacgaacgaagtgtctacacagatatcttgattggttta
ttgtcgcgaatcgttcctttgcgaaataaaaggaaatctccattgaaattaattgtaatg
tctgcaacattgcgcatcgaagatttcacagaaaatcctaaactcttcaaagtcaaacca
ccagtcatcaaagttgaatcaaggcagtttcctgttactatacatttcaataaaaggact
agtcaaaattacgtgaaggatgctttgtacaaggcagtaaagattcatactcagctgccg
gatggaggtattcttatattcttaacagggcagcaggaagtaaacacaatagtgcgcaaa
ctacgtaaagcgtttcctttaagaaacaaaaaattcatgctcaaaaaacaagaagcaaaa
gaaatccaacaagagaaagaacctagcagcaacaacagcgagtcagacgagggtttggat
atggatcgagtggtaaaaaatgccaggaaacatagaaaaaagctgaaggaggtcaaactc
cctgaacttaatcttgataattatgctgtaatgcctccagatgatactgagggtgatcta
ctcgatacagtagaaaatcgggatgcagaagacaaagaagaagaagaagatgatgatgat
gatgatgaagaagaagatttacaaaatcttatgggactgtcgtgcacacagccaatgtgg
gtgttaccactgtattcgcttcttccgagttacaaacaagcaaaggtatttgatccacca
cctgaaggctgtcgattatgtgttgtatcgacaaatgttgcagaaacttccctcacaatt
ccgaatgtaaaatacgttgtggatagcggccgctgcaagaccagattatatgacaaagtg
acgggtgttaacgcgttccaagtatgttacactagtaaagcagctgctaatcagcgggct
ggacgagcaggtagaactggaccgggacattgttacagattatattcatcagcggttttt
aatgaccagtttgagcaattttctatgcctgaaatacagaggaaaccggtagatgacttg
ttattgcaaatgaaagtcatgaatattgataaagtcgtcaattttccattcccatcatca
ccagatgtgttacaattgaaatctgctgaaaaacgtctctgcattctcggagctctagat
caatctaaacctggcaaagagaatgaatattgtgccaaagtaacgccacttggctacagc
atagcagcgttcccagtggcacctcgatttggtaaaatgctggcgctatcacagcagcac
gatctgttacaatacacagtttgcttggtggctgctttgtctgtgcaagaagtgttgatt
gaatcaaatccaattcaaggcgttactaagaatcagtggaatcaaacacgtcgaacttgg
gcaggaactgggaacagtttacttctgggggatgcgatggtcttagttcgagccgttggt
gctgcagaatatgctgggtcaaaagggacgatagtcaagttttgcgaagaaaatggacta
cgatacaaggctgtgacagaaattagaaaactcaggcaacaactgaccaatgaaatagtc
ctaaatataccagatttggatttgaatgtcaatccaagaatgaatcctccaacggataca
caagccaaattacttaggcaaattctactttctggtatggcaaatcaagtcgcacgcaaa
gtttctccagatgaagttgaggaagatcacgacaaagtaaagtggaaatatgcatacaga
tgtttggaaatggaagatccagtgttcatgcactcttcgtctgttctaaaaaaaacttac
cctgaatgggtagtttatcaggaggtttatgaaactaataaaatatacatgcgaggcatt
actgccattcagccagaatggttaccaaaatttgccacatccttatgccaactgagcgaa
cctgtgagcgacccgccgcctaggtacgattcaagaacgggaaaggtgatgtgccatgta
acagggacattcggtcgaggtggatggcaactgccgctgattgaagtagagtatccaaat
tccctggaaggtatcaagtggtttgcccgattttttttggaaggtcaagtttgcccggca
ttggaacgatttgcttccttgctactttctacacctggcacaatgaacaagacatgggca
aaattactcccgcgaactgaagcaatcacaaaagcgctaatggctaatcaagtttcgtca
aaagatcaactgtatcacatttggaaaacggattcgaaatttcttctgaatgcataccaa
aagtggttgccagaatcggcgcagaatgaagttgcaatactttggccaccgttatag
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