Neodiprion lecontei (redheaded pine sawfly): 107219016
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Entry
107219016 CDS
T09006
Name
(RefSeq) DEAD-box helicase Dbp80 isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03013
Nucleocytoplasmic transport
nlo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107219016
03015 mRNA surveillance pathway
107219016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107219016
Enzymes [BR:
nlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107219016
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107219016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
107219016
NCBI-ProteinID:
XP_015512597
UniProt:
A0A6J0BEK9
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Position
4:complement(40919337..40924152)
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AA seq
475 aa
AA seq
DB search
MASPKVDWAKYTDEQESLASKVTNLGISQPTTTPQDGSESSKSDETEDQISPAEKSLLQK
IIRKGLVETTKDLEIQRKDPTSPLYSIKTFEALHLKPALLKGVYAMGFNAPSKIQETALP
TLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDPNKDYPQVLCLSPTYELAIQTGEVAAK
MSQFCPEIKLKYAVRGEEIARGTKITDHIIIGTPGKVLDWAIKFRFFDLRKISVFVLDEA
DVMIATQGHQDQCIRIHKLLPRTCQMMFFSATYETAVMEFAEIIVSNPLIIRLLKEEESL
DNIKQYYVKCKNMDEKYTAITNIYGVITIGQAIIFCHTRKTAGWLAEKMSKDGHAVAVLS
GDLTVEQRIAVLDRFRAGLEKVLITTNVLARGIDVEQVTIVVNFDLPIDQDRQADCATYL
HRIGRTGRFGKSGIAINLVDSSHAMQVCQDIEKHFGKKIHYLDAEDAEEIEKIGA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccgaaagtggattgggccaaatataccgacgagcaagaaagccttgcctcc
aaggtgacaaatttgggtatatcccagcctactacaacaccacaggatggaagcgaatcg
tcgaaaagcgatgaaaccgaggatcagatatcaccagcagaaaaatcactgctgcagaag
attatcagaaaagggctggttgagaccaccaaggatctagagattcaacgaaaagatccc
acatcccctttgtacagcattaagaccttcgaagcactccatttgaagccagcactcttg
aaaggagtttacgcaatggggttcaacgcgccttcaaaaattcaggagactgctcttcca
acactacttgcagacccaccacaaaacatgattgcgcaatcacagtctggtaccggcaag
actgcagcctttgttctagctatgctaagccgagtagaccccaacaaggactatccccaa
gttctctgtctatcacctacgtatgaattggccattcaaactggcgaagttgcagcaaaa
atgtctcaattttgtccagaaattaagctgaaatatgctgttcgaggagaagaaattgct
cgaggtacgaaaatcaccgaccatataataattggaactccgggaaaagttctggattgg
gctataaagttcagattttttgacctgagaaaaatctcggtctttgttttggacgaggca
gatgtaatgattgccactcaaggacaccaggatcaatgcatccggatccacaagttgctt
cctcgcacttgtcagatgatgtttttctctgcgacgtatgaaacggcagtgatggaattt
gctgagataatcgtgagcaatccgttgataatacgtttgctgaaagaggaggaaagtttg
gacaacatcaaacagtactacgtcaagtgcaagaacatggacgaaaagtacacagctatc
accaatatttatggcgtgatcacaattggacaagctatcattttctgtcacacgagaaaa
acagccggctggctagcagaaaagatgagtaaagatggtcacgctgtggcagttttatct
ggtgacctgactgtcgagcaacgcattgctgttttagacaggtttcgagcgggtcttgaa
aaggttctcatcaccacaaatgtcttggctagaggaattgatgttgagcaagtaacaatc
gttgtgaacttcgacctaccaattgaccaagaccgccaagcagattgtgcaacttatcta
cacaggatcgggcgcacgggcagattcggaaaatctggtatcgccattaatctagtggat
tcatcgcacgcgatgcaagtctgtcaagatatagagaaacactttggaaaaaagatacac
tatttggatgcagaagatgcggaggaaattgaaaaaatcggtgcataa
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