Neodiprion lecontei (redheaded pine sawfly): 107219072
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Entry
107219072 CDS
T09006
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X2
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlo03021
]
107219072
03036 Chromosome and associated proteins [BR:
nlo03036
]
107219072
Transcription machinery [BR:
nlo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
107219072
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
107219072
SLIK complex
107219072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_CHD1_Hrp3
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
DEAD
Motif
Other DBs
NCBI-GeneID:
107219072
NCBI-ProteinID:
XP_015512633
UniProt:
A0A6J0BFW9
LinkDB
All DBs
Position
7:19491106..19507458
Genome browser
AA seq
1738 aa
AA seq
DB search
MMQKTLDSESGKESGSDSENESKSDSSSSGSNSGSGSGSDSTQNSWNSDSSESESDEATK
RRPPPSKSINRRAAQKVKENTRSRHKRISESSENSSFDSDDNRRQVTRRAGTAVSYKEQS
EEGTDSEDIVEVDEALATPLEPDNAETIERILGQRRGKKGVTGNVTTVYAVEENGDLNPT
DLADEEAETQYLIKWKGWSHIHNTWESEDSLKAQKVKGIKKLENFVKREREIKQWRDYAG
PEDIDYFECQLELQQDLLKSYNYVERIIAEYNKPDSGHPDYYCKWESLPYADATWEDGAL
IIKKWPEKIKEFRDREDSKRTPSKHCKVLKYRPKFHQVKGQPEYMGRGKDLVLRDYQMDG
LNWLIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTQQLYGPFLLVVPLSTMTSWQRE
MAQWAPDMNFVTYLGDVTSRNVIREFEWCYSSKRLKFNAILTTYEIVLKDKTFLGAINWA
ALLVDEAHRLKNDDSLLYKALTEFHTNHRLLITGTPLQNSLKELWALLHFIMPNKFNSWE
EFEKEHDNAAQKGYSKLHRQLEPFILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWI
LTKNYNALRKGVKGSTTTFLNIVIELKKCCNHAFLTKPTDGERRESNEDYLQQIIRGSGK
LVLLDKLLVRLRETGHRVLIFSQMVRMLDILGEYLQKRHFPFQRLDGSIKGELRKQALDH
FNADGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNI
YRLVTKNSVEEEIVERAKQKMVLDHLVIQRMDTTGRTVLDKKGPNTNNNPFNKEDLNAIL
KFGAEELFKDEEDGDEEPTCDIDEILRRAETRDEAPATVGDELLSAFKVASFAAFEEETE
PIPQLNEIDDESKDWAEIIPENFRKKLEEAEKSKEMEDLYLPPRSRKTLQQINQSGEEGR
GRKRRKTTGDDSEDAEDSGSEAEGTDDERPKKRGRPRVTPRENMKSFTDAEIRRFVKSYK
KFGAPLKRLDDIAADAELQEKPMSELRYLGEQLRIRCEACLAEFETIAKENKGTEEEGRG
PGRKRGRGPTFKVGGVMVNAKSLSAAEKELEPLDAALPADSEQRANWHLDIKLKPANFDC
DWTPDDDSRLLRGIYHHGMGSWEAIKLDANYKLGDKILPHNDSKPQVKQLNTRAEYLLKV
LKKQMDLKLGVTRTRKPRKPKEVKTVITKEIVEENDSSGDENKKLKLKLDKQPVKKEEEP
LCKKEPKEEGEVTSDDKKKDKKLKKEKKESRRGKKNKQPVGPMHFTANNEPRALDVLGDL
DPSIFNECKEKMRPVKKALKALDRPDQSLSQSEQVTHTRQCLVQIGNQINICLAEYKDPE
LIKEWRSNLWYFVSKFTEFDAKKLYKLYKHATKKDETNSNPVSSPEKKEETVNPKKHSEK
LHDKHSEKHSEKHVERHTDKWSDNSQSKDSSSKDSQRQQVKRRIDEVEENSNSSTPNKKH
QSITSVANSTTTGSMTTVTTTTTTTPIAANTLMANSNSNSSNSLSSEQPSRHKEPKEIKH
KEMKRDRDRDRERERSHGERGLDRLGGAKDERVRRDSGSYNIGGHYSGGREDDHWVPRDG
RDPRDSRFGDHKRERFESYGRMPSGYHRDRDRERDRGMHMNEKRSDYYRYPPGPPGYGYG
GPGSYGSGSSGGYPPSDLPPGHFRGRAYPGDGYPGDWRPNKDYRRDYDRRPPPPNANS
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaaaactttagattctgagtctggtaaggaatctggttcagattcggagaac
gagagtaagagcgacagctcatcatccggaagcaactccggatctggttctggatcagac
agtactcaaaattcctggaattctgacagttcagaatcagaatcggatgaagctactaaa
cggagacctccgccaagtaaatcgataaatcgtcgagcagcgcaaaaggtgaaagaaaac
actcgttcacgtcataaacgaatatcagaatcctcggagaattcttcgtttgacagcgat
gataatcgaaggcaagtcacgcgacgggctggaactgcagtcagttacaaagaacagagc
gaagaggggactgacagtgaggatatagtcgaggttgacgaagcattggcgactccgttg
gaaccagataatgccgaaaccattgaacgaattctggggcagagaagaggaaaaaaagga
gttactggaaatgtgacgactgtctacgctgttgaagaaaacggtgatctgaatcctaca
gatttggcggacgaagaagccgagacgcagtatctaataaaatggaaaggctggtcgcat
atacacaatacgtgggaatcagaggattctttgaaggcgcaaaaggtgaagggtattaaa
aaattagaaaatttcgtgaagcgagaacgggaaatcaaacaatggagagactatgctgga
cctgaagatatagactacttcgaatgtcagctggaacttcaacaggatttattgaaaagc
tacaattacgtagaacggataattgctgaatataacaaaccggattctggacatccagat
tattattgtaaatgggaaagtttaccatatgccgatgcgacgtgggaagatggagctttg
ataataaaaaaatggcctgagaagatcaaggaatttcgcgatagggaagattcgaaacga
acaccgagtaaacactgtaaagtattaaagtatagaccaaaatttcatcaagtcaaaggg
cagcccgaatacatgggaagggggaaagatttagtcttgagagactatcaaatggacgga
ttaaactggttgattcattcttggtgtaaagagaatagtgttattctcgcggatgagatg
ggtctgggaaaaactatacaaactatatgcttcctttactacctttttcacacgcaacag
ttgtatggaccatttttattggttgtaccattgtctacgatgacgtcttggcaaagagaa
atggcacagtgggcaccagatatgaattttgtaacttaccttggtgatgtgacgtctagg
aacgtgatcagggagttcgaatggtgttatagttcaaagaggttgaaattcaacgcaatt
ttgacgacgtacgaaatagttttgaaggataaaacgttcttgggggccataaattgggcc
gcactgctcgtcgacgaggcgcatcgtctcaaaaatgatgattcacttttatacaaagca
ttgacagagtttcataccaatcatagacttcttatcaccggaactccgttgcaaaacagt
ttgaaagagttgtgggcattgctgcattttataatgcctaacaaattcaactcttgggaa
gaatttgaaaaagaacatgacaacgcggcgcaaaagggttactcgaagcttcacaggcaa
ttggaaccattcattttgcgtcgagtgaaaaaagacgtagagaaatcattgccggctaaa
gtcgaacagatattacgtgtcgagatgacctctttgcaaaaacagtattacaagtggata
cttactaaaaattataatgcccttcgcaagggtgttaagggatcgacgacaacgtttctc
aacattgttatagagttgaaaaaatgttgcaatcatgcattcctaactaagccaacggac
ggtgaaaggcgagaaagcaacgaggattatttacaacagataattcgtggatcgggaaaa
ttggttttgttggataaactgttagtacgactccgagaaactggtcacagagttttgata
ttcagccagatggtcagaatgttggacatcttgggagaatatctgcaaaaaagacatttt
ccctttcaaagattagatggaagcataaagggagagctcagaaagcaagcgctggatcat
ttcaatgcagatggctcgacagacttctgctttttactgtcaaccagagctggtggtctt
ggaattaatttggcaacagctgatactgttatcatatttgattctgattggaacccgcag
aacgatctgcaagcccaggctagagctcatcgtataggtcaaaaaaaccaggtgaacata
tacagattggtgacaaagaattccgtggaagaagaaatagttgaacgtgcgaaacaaaaa
atggtgctcgaccatttagtaatacagagaatggatacaacgggaagaacggtcttggac
aaaaagggtcccaacacaaataataacccttttaacaaggaggatctaaatgctattctg
aagttcggtgccgaagaattgttcaaagatgaagaagacggggatgaggagcccacttgt
gacattgacgaaatactgcgacgtgctgaaaccagagacgaagccccggccacggtagga
gacgaactcttatcggcgttcaaagttgccagttttgccgctttcgaagaagagacagag
ccgattcctcaacttaatgaaattgacgatgaaagtaaagattgggctgagattattcct
gaaaattttaggaaaaagcttgaggaagcggaaaaatctaaggaaatggaggatctgtat
ctaccacccagaagtcggaagactcttcagcaaatcaatcaatctggtgaagaaggaagg
ggtagaaaacgcagaaaaactacgggcgacgacagcgaagatgctgaagattcgggaagc
gaggcagaaggcaccgatgatgagaggcctaaaaagcggggtagaccaagagtcactcct
agagaaaatatgaagagttttaccgacgccgagattcgaaggttcgtcaagagctacaag
aagtttggggctccgctgaaaagattagatgatattgcagccgatgccgaattgcaagag
aagcctatgtctgagttgcgttacttgggcgagcagctaagaatcagatgcgaggcttgc
ttagcagagtttgaaactatcgctaaagaaaataaagggactgaagaggaaggccgtggc
ccagggcggaaaagaggaagaggtccaaccttcaaagttggcggcgttatggttaatgca
aaatccctttctgctgctgaaaaagaattagaaccgctcgatgccgcactccctgcagat
tccgaacagagagccaattggcaccttgatataaaattaaaaccggcgaactttgactgc
gattggactccagacgatgactcgaggttacttagaggaatttatcatcatggaatggga
tcttgggaggcgattaaattggacgcaaattataaacttggtgacaaaattctccctcac
aacgacagtaaacctcaagttaaacagttaaatacacgagctgagtatttattgaaagtg
ctcaaaaagcagatggaccttaaacttggagtgaccagaacgagaaagcctcgcaagcct
aaggaagtaaaaactgtcattactaaagaaattgtcgaggagaatgacagttcgggagat
gaaaataaaaagctcaagcttaaactggacaagcaaccggttaaaaaggaggaagagcct
ttgtgcaagaaagagccgaaagaagaaggcgaggttacgtcggatgataagaaaaaggat
aaaaaactgaagaaagagaagaaagagagtagaagagggaagaaaaacaaacaacctgtc
ggtccaatgcattttacggccaacaatgagcctagagctcttgatgttcttggtgatctt
gatccgtctatatttaacgagtgcaaggaaaaaatgcggcccgtcaaaaaagctctgaaa
gctttggataggccggatcagtctttaagtcagagtgaacaagtaacgcataccaggcaa
tgcctcgttcaaattgggaatcagataaatatctgtctggccgagtacaaggatcccgaa
cttataaaagagtggagaagtaatctatggtatttcgtgtctaaatttacggaatttgac
gcgaaaaaattatacaagttgtataaacatgcgactaagaaggatgagactaactcgaat
ccagtatccagccccgaaaagaaggaagaaactgtcaacccgaagaagcatagtgaaaaa
ctacacgataagcatagtgagaagcatagtgagaaacatgtcgaaagacatacggataag
tggagcgataattcacaatccaaagatagtagcagcaaagattcacagagacaacaagtg
aaacgtagaatagacgaagtggaggagaattcaaacagcagtactccaaacaaaaaacat
caatctattacctcggttgcaaatagtacgacgactggttccatgacgacggtaacaaca
accacaacaacgacgccaattgctgcgaacactttgatggcaaactcgaattcgaattcc
agtaattcattgagtagcgaacaaccgtccagacacaaggaaccaaaagaaatcaaacat
aaggaaatgaaaagagacagagatcgagatagggaaagggaaagatcccacggcgaaaga
ggtttggatagattgggcggagcgaaagatgagagagtgaggagagacagcggaagttac
aacatcggtggtcattacagtggaggacgcgaagacgatcattgggtacccagagacggt
agagatcctcgagacagcaggtttggagatcataaacgagaaagattcgaatcttacgga
cgtatgcctagcggttatcatcgcgacagagacagagaacgtgatcgcggcatgcatatg
aacgagaaacgaagtgattactatagatatcctccaggccctccgggttatggatatggt
ggtccaggaagttatggaagcggaagcagcggtggttatccaccctcagatctaccgcct
ggacatttcagaggacgagcgtacccaggggatggatatcctggtgattggaggcccaac
aaagactatagacgtgattacgaccgtaggccacctccgccgaatgcaaattcctag
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integrated database retrieval system
