Neodiprion lecontei (redheaded pine sawfly): 107219085
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Entry
107219085 CDS
T09006
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107219085
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107219085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
107219085
NCBI-ProteinID:
XP_015512657
UniProt:
A0A6J0BER7
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Position
7:19551366..19556649
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AA seq
989 aa
AA seq
DB search
MSLFPAYSSNSNNEAKSLNEAQKSSDEVSNLWLENSSFVAPVVQTPVIDLWSDSSSDESV
KIIFNDSAPSPKSEVIPIDLDGSISSDYNRSSTSRRERKHKKRKKKTRDRSSHRQKEKYA
KILENVYFEDTARDKRNLTVSTLGGSDRPSYTLYSAHLGFRPFKKLLKQTPRRYHAVNID
SVRKGEKQDTRIKRSQTSDESKQLQNEMEDFNWGVNMEEEQTKKTKEFNEGLAENPDDVE
LWMKYINFQDVISRFQKDRGITDVRNTITCQRKLAIANKAFEKNPSSTELLKLKLSLTAQ
LLPADQFSSEVEALVNKDSGNIILWRALIMATQASVAICTVPKVLDLYSRCLSSLRQRLR
TSPRLYDQQILEMLYRCLTFLRQAGLWEQMWETLRLNLTLNLNLSKDNFRFRGFIDERKL
IGMEEVILTSRLPLNQLWLRVESLRESCHWISVSSDQLEVLGDSRRFVLPEDVTDFVQPI
MSRDSSLKLAVYSILSLKVPLLPMQDFIAHDLGLTQIEWDADSIEMLLPLVHPFVGILAG
SEEKKKVMERILEDQLTSGPQYLKYHPAQEPYLDFVRDTFWAIAESFSATQYERTSIYVW
WLRFERLLASLNKNDKDDHRKKKLKSMVKDFLKRDGNRNNLHFYREYALIEKEIGRFDSC
VNILETTIGMQTNFLANLSTQQEKTVLCSVFRALFETLLDPKTYQENHRGRILTAVARMV
SGPDENRLEQAEEFLETSVDEFLRQPVSDLIEKTYFLPSFECDLITCYAYFLYVKNWTIS
EPIGVLEKCLKHSKANKYLQECLYESTVALLHLDSKRSKLHGISKETLDQALDLYPMNCY
LLSVGMEIESESPCWKVSHHRTGSFQAMASCLAIHIRIERLESLGLQDAAVAATNKLLSI
HRRLAKDPGSQRCPLIWRLYMLFLRERNLCEGRGEEVYHESVAECPWARGIYTDAAQVAP
QLLTEIQDLIREKELRMHVTPEELDILRG
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttatttccagcgtattcgagtaattccaataacgaggcaaagtccttgaatgag
gctcagaaaagttcagatgaagtatcgaatttgtggctggaaaattccagctttgtggca
cctgtggttcaaactcccgtgatcgatctttggtcagattcatcttctgatgagtcagtg
aaaataatatttaacgacagcgcaccttcaccaaaatcagaggtaatacctatagatttg
gatgggagtatcagcagcgattataacagaagttccacatcaagacgcgagaggaagcac
aagaagcgaaagaaaaaaactcgcgacagaagtagtcacaggcagaaggagaagtacgca
aagatacttgagaatgtgtattttgaggacacggcacgagacaagagaaatttaacggta
tctacgcttggtggctcagacagacccagctatactttgtactctgctcatcttgggttt
agaccatttaagaaattgctaaaacaaacaccgcgaaggtatcacgccgtcaatatagat
tctgtgcgcaaaggtgagaaacaagatactagaattaagaggagccaaactagcgatgaa
agcaagcagctgcaaaatgagatggaggattttaactggggtgttaacatggaagaagag
cagacgaaaaaaacaaaagaatttaacgaagggttggcagaaaaccctgacgatgttgaa
ttgtggatgaaatacatcaacttccaggatgtaatttcccgattccaaaaggatcgcggg
atcacggatgttaggaacacgataacttgccagcgtaaactggcgatagcgaataaagct
tttgagaaaaatccaagttctacagaactcttgaagctcaagttaagcctcactgctcag
ttgttacctgctgatcaattttcaagtgaagtcgaggccctcgtcaataaggattcgggg
aatattatactgtggcgtgctttaattatggccactcaagcttctgtagccatttgcaca
gttcctaaagtcttggacttgtactctagatgcctttcgagtctacgccaacggcttagg
accagtccacgattatacgatcaacagatccttgaaatgctgtatcgctgcctgacgttt
ctgaggcaggcaggactttgggaacagatgtgggaaacgttgagactcaatttaactctg
aatttgaatttgagtaaggacaactttagattccgagggtttattgacgagcgaaaatta
attggaatggaagaggtaatattaacatcgagacttccattgaaccaattatggttgagg
gtagagtctctccgagagagttgtcactggattagcgtaagcagcgaccaattagaagta
cttggagattcgcggcgctttgtactaccggaagatgtgactgattttgtacagccaata
atgtcacgtgactccagcctgaaacttgccgtttactctatactttcactgaaagtgcct
ttgcttccaatgcaggattttattgcccatgatttagggttaacacagatagaatgggat
gctgattcgatcgaaatgttgctgccgttggttcatccttttgttggaatcttggctgga
tctgaagagaagaagaaagtaatggagagaatacttgaggatcagttaacatcgggaccg
caatacctgaaatatcatcctgcgcaagaaccgtatctggattttgtcagagacacgttc
tgggcgattgcagaaagtttctcagcaacgcagtacgagcgtacaagtatttatgtttgg
tggttgcgattcgagagattgttagcttcgcttaataagaatgataaagatgatcacaga
aagaagaagctcaagagtatggtgaaagattttctcaaacgagatgggaacagaaacaat
cttcacttttaccgggaatacgcattaattgaaaaagaaattggccgctttgacagctgc
gttaacattttggaaaccactattggaatgcaaactaattttcttgcaaacctctctact
caacaggagaagactgtcttgtgcagcgtattcagagctctgttcgaaactcttctcgac
cccaaaacttatcaggaaaatcacagaggccgcatacttacagctgttgctcgaatggtc
tccggaccagatgaaaatcgtttagaacaagcggaggaattcttggagactagcgtcgat
gaatttctacggcaacctgtgtctgatttgattgaaaaaacgtattttctcccaagcttc
gaatgcgacttgatcacttgttacgcgtactttctctatgtgaaaaattggaccatctcg
gagccaattggtgtattggaaaaatgtttgaaacattcaaaagcaaataaatatttgcag
gaatgcttatatgaaagtacggttgcacttttgcatttggattccaaacgttcgaagttg
cacggaatttcgaaggaaacacttgatcaagctttggatttgtaccccatgaactgctac
ttactttctgtaggaatggaaatcgaaagcgaatcaccttgctggaaggtgagccatcat
cgaactggatcctttcaggcaatggcttcatgtcttgctattcacattcggatcgagcgt
ctagagagcctagggcttcaagatgctgcagtcgctgcgactaacaagctcttgtcgatt
catcgtagactagccaaagatccaggctcgcagagatgcccgttaatatggagactttac
atgctattcttgcgtgaacgtaatctgtgcgagggcagaggcgaggaagtgtatcacgag
agtgtagctgagtgtccatgggccagaggcatttatactgatgctgctcaagtagcaccc
caacttcttactgaaattcaagacttgattcgcgaaaaagagctaagaatgcacgttact
cccgaggagttggacattctgcgtggctaa
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