Neodiprion lecontei (redheaded pine sawfly): 107219090
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Entry
107219090 CDS
T09006
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107219090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlo03019
]
107219090
Messenger RNA biogenesis [BR:
nlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107219090
mRNA degradation factors
5'-3' decay
Lsm complex
107219090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107219090
NCBI-ProteinID:
XP_015512666
UniProt:
A0A6J0BE56
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Position
6:26287096..26288339
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AA seq
134 aa
AA seq
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MNVVPGTASLLEELDKKLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGKEYGDIP
RGVFIVRGENVVLLGEIDGDKEKDLPLSQVPVDDILDAQRREQELKQDQEQLMSKALKER
GLSYIPDLGHDDMF
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagtgcccggaacagcgtccctcctcgaagaactagacaaaaagctaatggtt
ctgttaagagatggtagaacacttatcggatatctcagaagtgttgatcaatttgccaac
ctggtccttcatcgaactatcgaaagaattcacgtcggcaaagaatatggagatattcct
cggggcgttttcatcgtccgaggcgagaatgttgttctcttgggtgaaatagatggggac
aaggaaaaggatctgccactatctcaggtgcccgtagatgatatattagatgctcaaaga
cgagagcaagaattgaagcaagatcaagaacaactgatgagcaaagctctgaaagaacga
ggcctctcctacattccggatttggggcatgatgacatgttctga
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