Neodiprion lecontei (redheaded pine sawfly): 107219284
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Entry
107219284 CDS
T09006
Name
(RefSeq) helicase domino isoform X3
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
DBINO
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
107219284
NCBI-ProteinID:
XP_015512955
UniProt:
A0A6J0BDK3
LinkDB
All DBs
Position
5:2744103..2767962
Genome browser
AA seq
2844 aa
AA seq
DB search
MSDKQTAASLPPLVGGGGNNGSSSQQTVRLQQVLANAQGLNVLTTGGGQQFVITSQVPGL
AQVIPGTITTNAGVQQVGVTRIVNISSTSPRVSVVGVAGASNSPLPSPTRKSPAKVVLST
SPKLVRTTTPNVFVTPTSQSSVQSPPVRKRLRLTESTEKATTVEDSLGYRRRIMEHKMTR
MRAIREKYAENASELFFLHAGGNMMDFQNWRKQPFTAQYLHFLRQHRLDPEDDDEDLTVP
LPAVISDVPTSSLTTSFVAAASSSQGTEVKIPGAGVTPVAVSTTLPAAVAQLSQQGQVPG
RPQGGRHGMVFAIRPAVQNPPATTHPSPTSTIAPTFIIGGTPIVPDPPKSSPVQSSPVAE
RIPTAGTSNKTPKVTTSLTSSQPVVKLVKLPASTVVSSCDMTNNQEQIVEKAKQEAYVMQ
RISELQREGLWSERRLPKVQEPSRTKAHWDYLLEEMVWLAADFAQERKWKKAAAKKCARM
VQKHFQEKAVQAQKAEKSHELRLKKIAGFVAKEIKTFWTNVEKLVEYKQQTRLEEKRKKA
LDQHLNFIVGQTEKYSTWLTEGLNKAEGAPSVSASMNSSRISSPITAGKHYSDDEFEPNQ
SSDDDEETIAKAEEEMKSTTNHVEEVEMLKRESELPLEDLLKELPPNYLEERDKSLSPGP
NEAVGNDSNSMDGDEEFIAASDESSDYEDTIMEQEKLELNQDHKQELNDLKAENEMSIDE
LMAKYGNLPDAPMDVDIESDGESSKDSVKDEEEEEDRVEDSEVESESEDETKDEDSQTQS
DDETNVGLKSLLEDLSVEKSPNDKSIAESMDKSDQARNEMDDVAALAESIQPKGNTLLTT
SVVTKIPFLLKHSLREYQHIGLDWLVTMFERKLNGILADEMGLGKTIQTIALLAHLACEK
GNWGPHLIIVPTSVMLNWEMECKKWCPGFKILTYYGTQKERKQKRTGWTKPNAFHICITS
YKLVIQDHQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFQTQRRLLLTGTPLQNNLME
LWSLMHFLMPNVFQSHREFKEWFSNPVTGMIEGNSEYNENIIRRLHKVLRPFLLRRLKTE
VEKQLPKKYEHVVMCRLSKRQRYLYDDFMSRAKTRETLASGNLLSVINVLMQLRKVCNHP
NLFEVRPTVSPFQMEGINYVTASLAWSALDYDPFKHVDLSCLNLFLIDLELTLTAFVAHR
SRQLRTPRKLIEEIDTQPDPPPRCPSGKIKINVRLSNQSKTSTNTNTNATPQQQPAPPAK
LKGLTGLLPTPKVGTSPLIKTLNNQTPSGQGVTLRVASGQELQGYSVQLVQHQGSVKAIP
VATLAHTLQTTVNSIPTTATMNPQRITVGNANIKDGIQRLATQTVTVKQGDSVQRIAVPS
FAQLVQTSTGRHIILTSNQQNTNTVSFPVMTSNGQRLTVLSKSLMGLTTSVSTVNRVMSG
VVTTTTPATSGKPIMRVPPLNVTTSIPQTTPGTQQVQQQPLRCGIVTRNCQSTAGKNQIK
EIPKSEFHLPQLDEERRQRRQAKLQAIANVNERRCAACPFYGEDLFDALRIAKPAKNCCW
HSEGWLNCNNTHKNPRTRREYFSRTEALAEAIKSTELIVQQLQEVFERFVVYVPAVRAPM
PKFHVSHPPPHKLWGQQRLQIELQRELSPKLALFHPVASAMFTQFPDPRLIQYDCGKLQS
LDKLLRKLKSGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGATKVDQRQVLMERFNG
DKRIFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLV
SEKTVEENILKKANQKRLLGDLAIEGGNFTTAYFKSSTIQDLFNVDQAENDASARMADVL
ERTKERDKISQRELLASTTQPASAQPLEDKAAMGALESALAAAEEDLDVQAAKTAKAEAV
ADLAEFDENIPLDEVEKEDTQISKAEQEVQHLVQQLSPIERYAMKFVEESEGSFSAAQLA
AAERELEQQKKEWELGRLRALREEEERRMRLADDDEKPLTFGREDAQNQIWLSENTMEQM
PMWCPPTPPTTDTDVYVDFSLGFLYESTPMSEAQLPPIYVKKEHKRSRVDAGSSDRDGHR
PIKMRHKEESVYAPRSLFDRPSPALIKMRRDMKLQKYRGIVRPPVPIPGIKPSPAMKPTP
EPDHVLEWMIHEDWALLQAIQVYQGLPLNLMILSPGHTPNWDLVADIVNNTSRIYRSPKQ
CRNRYESVIVPREEGKLLYDTTPKKQKKQKGLYKMPQVSEQQTKTNRPMRTSQLYNQDKN
HSFTSMCCQRFDTIKSVSNKRTPTVKPLLVNPLMKNPKHAAVLAECGIQYDSPPAPIEVA
TRRADRIAKEKLKNAANTALTAEQQQQAQQAAARLAQQQQQQQQVQQQQIQLQQQPQVIV
NTPTSQQHQLTQIVTAVTTAMSTPLKTLPSTNTIVTSGATVVTTTVKSRTPGAITMQDVR
PSPTVVSVANLQPVQRITNTNLVSAAQTPSAITQKGIVAVTVATASGSKTLTPAQIQYYR
QQQQVFLRQQHLKVLQAQAVGGQKVSVAVSAAAAQQRAALMKQGITTATVAQATGGKQTV
ARTVSETEVAALIKRQAVLQQQAKAVAQVQVPTQAGLTPAQIFAQAGLQVQQAGTSVGGT
PVATLVKATGVTGVRAATPQQIRQLALHPQLLAQRKLPGQKVAQLAQVAGKAGVQTQLIV
QQKSLPATMTVQQIQQVMKHVQPSTMQQFTHVSAGQAVSQAGQVVLAKSPLQTRVIPVAS
SLKQTIQVVTASSAQLRQGTPTQGKPVVTTARGSPGPSQVRLQTITHPPHSQQQQQQQQQ
QQQQQQQQQQQQQQQQHHQDPQTK
NT seq
8535 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataagcagactgctgctagtctaccgcccctggttgggggcggaggaaataat
gggagctcatcccaacaaacagttagactacaacaagttctggccaatgcccagggcctt
aacgtcctcacaacaggtggcggacaacaatttgtcatcacttcacaagttcctggcctc
gcacaggttatacctggaacaatcaccactaatgctggtgttcaacaagtcggggttact
aggattgtcaatatcagtagtacttcgccaagagttagcgtcgttggagttgcaggtgcg
agcaattcgccgcttccgtctccgactcgcaagagtcctgccaaagtcgtcttgtcgacg
tctcccaagctggtcagaacaacaacaccgaatgtatttgtcacgccgacttcgcagagt
tcggtacaatctccgccggtgagaaaaagactaaggctcacagagtcgaccgaaaaagca
actacagttgaagactcattgggctacagaagacgcatcatggaacataaaatgacgagg
atgcgagcgatccgagaaaagtatgctgagaatgcatctgagttgttcttccttcatgct
ggtggaaatatgatggattttcaaaactggaggaagcaaccgttcactgcccagtacttg
catttcttgagacagcacagacttgatcccgaggatgacgacgaggatttgaccgttcct
ttgcctgcggtcatttcagacgtgccaacttctagcctcacaaccagtttcgtcgctgct
gcttccagtagtcagggtaccgaagttaaaattccaggtgcaggcgtcactcctgtcgct
gtttctaccactctcccggcagccgttgcccaactaagccaacaaggacaagtaccaggt
aggccccagggaggccgccacggcatggtgtttgcgatacgaccagctgtacagaatcca
ccagccactactcacccttcacctacctctaccatagcacccaccttcattataggtggc
actcccatagttccagatccaccgaaatcatcaccagtacaatcgagtcctgttgctgaa
agaattccaactgcaggaacatcgaataaaacaccaaaagttacgacaagtcttacctct
tctcagcccgttgtcaagcttgtcaaattaccagcgtcaactgtagtctcttcttgtgac
atgacaaacaatcaggaacaaattgtagaaaaagcgaaacaggaagcatacgttatgcaa
aggatctcagaattacaacgagaaggtttgtggtcggagcgacggttgcccaaagttcag
gaaccttcaagaacaaaagcccattgggattaccttttggaggaaatggtttggttggct
gccgactttgcacaggaaagaaagtggaaaaaggctgcggcaaaaaagtgtgccagaatg
gttcagaaacatttccaagagaaggctgttcaagcacaaaaggctgagaagtctcacgag
ctcagattgaaaaaaatcgccggttttgttgccaaagagattaaaacattttggacaaac
gttgaaaagctggtggaatacaagcaacaaactagattagaagagaaaagaaaaaaggca
ttggatcagcatttaaattttattgttggtcagactgaaaaatattccacctggctcact
gaagggttgaataaagccgaaggagcacccagtgtttctgcttcaatgaatagttctcgg
atatcgtctcctattaccgctggaaaacattattctgatgatgaattcgagcctaatcaa
agttcggatgacgatgaagagacaattgctaaggctgaggaggagatgaagtcgacgaca
aatcacgtagaggaggttgaaatgttgaaacgcgagtcggaacttcctttggaagatttg
ctgaaagaattacctcccaactacctcgaggaacgagataaaagcctctcccctggtccg
aacgaggctgttggaaatgattcaaattccatggacggtgatgaagaatttatcgctgct
tcagacgaatcgtcagactacgaggacacaattatggaacaggagaaacttgaacttaat
caggatcataaacaggaactgaacgatctcaaggctgaaaatgaaatgtccattgacgag
cttatggcgaagtatgggaacttaccagacgcgcctatggacgttgatatagaaagtgat
ggagagtccagcaaggattcagtgaaagatgaagaggaagaggaagacagggtggaagat
agcgaggttgaaagtgaaagtgaagatgagaccaaagacgaggattcgcaaactcaaagc
gacgacgaaactaacgttggtcttaaatcccttttggaagatttatcagttgaaaaatct
ccgaacgataagagcattgcagaatcgatggacaaatcagaccaagccagaaacgagatg
gatgatgttgcggcactagctgaaagcatacagcctaagggaaacacgctgttgacgaca
agtgttgtgacaaaaatcccgtttctgcttaaacactcattgagagaatatcagcatatt
ggtttggactggttggtaacaatgtttgaaagaaaattgaatggtatactagcggatgaa
atgggtctcggaaagaccatacaaacgatcgccctcctggcacacttggcctgtgaaaaa
ggcaattggggtccgcatcttatcatagttcctacttcggtaatgctaaattgggaaatg
gagtgcaagaagtggtgtcctggtttcaagatattaacttattatggcacacagaaagaa
agaaaacaaaaacgaacaggttggactaagccgaatgcctttcacatatgtattacgtct
tacaaattagttattcaagatcatcaaagttttagacgaaagaaatggaaatatcttata
cttgacgaggcgcaaaatataaaaaatttcaaatctcaaagatggcagcttctgttgaac
tttcagactcagcggcggctattgctaacagggacgccgcttcaaaacaatctaatggaa
ctctggtcattgatgcattttttaatgccaaacgtattccaatctcacagagaattcaag
gaatggtttagcaaccctgttaccggaatgatcgagggaaatagcgagtacaacgagaat
atcatcagacgtcttcacaaggtgctcagaccgtttcttttgagacgattaaagacagag
gttgaaaaacagttgcctaagaagtacgaacatgttgtcatgtgccgactttcaaaacgt
caaagatatctttatgacgatttcatgtcacgggccaaaactagagaaactttagcaagt
ggtaatttattgagcgtcattaacgtactaatgcagctacgaaaagtgtgcaaccatcca
aacttgttcgaagttcggcctactgtgtcgccttttcaaatggaaggaatcaactatgtg
actgcatcattagcttggagcgctctcgattatgatcctttcaagcacgtcgatctatcc
tgtctgaatctattcttgatagacttggaacttaccctaacagcattcgtagcacataga
tccaggcaattgagaacaccccgaaaactcatagaggaaatcgatactcagcctgatcca
cctccgaggtgtccatcagggaaaattaaaatcaacgtcaggctgtctaaccaaagtaaa
acctcgacaaacacgaatacaaatgctacaccccaacagcagcctgcaccaccggcgaaa
ttgaaaggcttgacaggacttctaccaactccaaaggtcggaacatcgccattgataaag
acattgaacaatcaaactccttccggacaaggggtgactttgagggtggccagtggacaa
gagctacaaggttattcggtacagttggtgcaacatcaaggtagcgtcaaagctattcct
gtcgccaccttggctcacactctgcaaacaacagtgaattctataccgacaacagcgacg
atgaatccgcaacgtattaccgtagggaatgctaacattaaagacggtattcagaggcta
gcgacgcagactgtaactgtaaaacaaggagattctgtccaaagaatagccgtgccaagt
tttgcccaacttgtccagacatcgaccggcaggcacattattctcacttcaaatcaacaa
aataccaacacagtttcatttcctgtaatgacatcaaatggtcaaagattgactgtctta
tccaagtctttaatgggtttgacgacatctgtttcaacggtaaacagagttatgtcaggt
gttgtaaccacaactactcctgcaaccagtggtaagcctataatgagggttcctccgcta
aacgttacaacctcgattcctcaaactacacctggaacacagcaagtacaacagcaacca
ctcagatgtggaattgtcactagaaactgccaaagtactgcgggtaaaaatcagatcaag
gaaattccaaaatctgaatttcatttgccccaactggacgaagaacgcaggcagcggagg
caagctaagcttcaagcaatcgcgaatgtcaacgagaggcgttgcgcagcttgtccgttt
tatggagaggacctttttgacgctctcagaatagccaagccagcaaaaaattgttgttgg
catagcgaagggtggttaaattgcaataatacgcataaaaaccctcggaccaggcgggaa
tacttttcacgcactgaagctctcgctgaagctataaagtctaccgaattaatcgtccag
cagctccaagaagtttttgaaaggtttgtggtttacgtgcctgcggtacgagctccgatg
ccaaagtttcatgtttctcatccacctccacacaagctgtggggtcagcagagactgcag
atagaattgcaacgtgagctctctccaaagttagcactttttcatcctgttgccagtgcg
atgttcacgcagtttccagacccccgccttattcagtatgactgtggtaaacttcagtcg
ctggacaagttactgcggaaattaaaatcgggcggtcacagggttctaattttcactcaa
atgaccagaatgctagacgttcttgaagcttttctcaactttcacggacatatttactta
cggctcgatggcgcaacaaaagtcgatcaaagacaggtattaatggaaagattcaacggc
gataagaggatattctgcttcatactgtcaacaagatctggaggtgttggtgtcaatttg
acaggtgctgacactgtcatattttatgacagcgattggaatcccacaatggatgctcag
gctcaagatagatgtcacaggataggtcaaaccagggatgttcatatctacaggctagtc
agtgagaaaactgtggaagaaaatatattgaagaaagcaaaccagaaacgattactcggg
gatcttgcgattgaaggtggaaactttacaacggcatacttcaagagttctaccattcaa
gatttattcaacgtcgatcaagctgagaatgacgcgtccgccagaatggctgatgtattg
gaaagaactaaagaaagagataaaataagtcaacgtgagctgctagcttccacaacgcaa
ccagcgtcagctcaaccgttagaagataaggctgcaatgggcgcgttagaaagcgcgctt
gccgcggccgaagaagatctcgacgtgcaagccgctaagaccgcaaaagctgaagctgtt
gcagatttggctgagtttgacgaaaatattccactcgacgaggttgaaaaggaagacacg
caaatcagcaaagctgaacaagaagttcaacatctcgtacagcagttatcaccgatcgaa
cgttacgcaatgaaatttgtggaagaatcggaaggtagtttctcggcggctcaactagcg
gcggccgaacgagaacttgaacagcagaaaaaggaatgggaattgggtaggctgagagcg
ttgcgtgaggaggaggaaagacgaatgcgacttgcggacgatgacgagaagccgttgaca
ttcggacgcgaggacgcccaaaatcagatatggttgtcagagaacaccatggagcaaatg
ccgatgtggtgtcctccgacgcctccgacaacagatactgacgtatacgtagacttctct
ctggggtttttatacgaatcaactccgatgtcggaagctcaactgccgccgatctatgta
aagaaagaacacaaacggagcagagtggacgctggttcaagtgatagagacggtcaccgt
cccatcaaaatgcgccacaaggaagaatccgtttacgcaccacgttctctgttcgatcgt
ccatctccagctttaatcaaaatgcgacgtgatatgaagttgcaaaagtatcgaggtatc
gttagaccacccgttccaatacctggaataaaaccgtccccagctatgaagcctacaccg
gaaccggaccatgttcttgagtggatgattcacgaagattgggccttactccaggcaatt
caagtatatcagggactgcccttgaatttaatgatactttctcctggacacacgcctaat
tgggacctggtagctgacatagtaaacaatacgtcgcgaatatatcgctctccaaagcag
tgtagaaacaggtacgaatctgtaatcgtgccccgagaggagggcaaacttctctacgac
actacgccaaagaagcaaaagaaacaaaaaggactttacaaaatgccgcaagtttcagag
caacagaccaagacaaatcgaccaatgcgaacatcacaactatacaatcaggataagaat
cattctttcacatctatgtgctgccaaagatttgatacgatcaaatcagtgtcaaacaaa
cgaactccaacggtgaaaccgttgcttgtcaatcctttgatgaagaatcctaagcacgca
gcagttttagctgaatgcggcattcagtatgacagtccaccagctcccattgaagtcgct
acacgcagggcagatagaattgcaaaggagaaactcaagaatgctgccaacacagcatta
acagcagaacaacaacagcaagcgcaacaagctgccgcccgtttggcacagcagcagcag
caacagcagcaagtccaacagcagcaaattcagctgcagcaacagccacaagtgatcgtt
aatacgcctacatcacaacagcatcagctgacgcagattgttaccgcggtaacaacagcc
atgagtacacctctgaaaactctaccttcgacaaacacaatagtgacgagtggagcgacg
gtcgtaactacgactgtgaagtcgagaactccaggtgcgataactatgcaagatgttcgg
ccaagtcccaccgtcgttagcgttgctaacttgcagcctgttcaaagaatcacgaacacc
aacttagtatccgcagcgcaaactccatctgccataactcagaaggggatagtggctgtg
acagttgctaccgcgtctggtagtaaaaccttgactcctgctcagattcagtattataga
cagcagcagcaagtatttctgaggcaacagcatctcaaagtattacaagcacaggcggtc
ggtggccagaaagtttcggtcgcagtctcagcagcggcggctcaacaaagggctgcgcta
atgaagcagggtatcaccacagcgactgttgctcaagcaacaggtggtaagcaaaccgtt
gctcgaaccgtgtccgagacagaggtggctgccttgataaaacgtcaagctgttttgcag
cagcaggctaaagcggtagctcaagttcaagttcccactcaagctgggttaacacctgct
cagatattcgctcaggctggactgcaggtccagcaggctggcacttctgttggaggaaca
ccagtcgctacattggtcaaagcaactggcgttactggagtcagggctgctactccgcag
caaattagacagctcgctcttcacccgcagctcttagcacaacggaaattaccgggtcaa
aaagttgctcagcttgctcaagtagctggaaaagctggagtacagacacagcttattgtg
caacaaaaatctttacctgctaccatgactgtgcagcaaattcaacaagttatgaaacac
gtgcagccatcgactatgcaacaattcacccatgtttctgccggacaagcagtttcgcaa
gctgggcaagttgtccttgctaaatctccgcttcaaactcgggtgatacccgtcgcatcg
agtttgaaacagactatacaggttgtcacagcaagcagcgctcagctgcgacaaggaact
ccgacccagggaaagcctgtcgtaacaaccgcgagaggtagtccaggtccaagtcaagtt
cggctccaaacaattactcatccaccccattcacagcagcagcagcagcagcagcagcag
cagcaacaacaacaacaacaacaacaacaacaacagcaacagcaacagcaccaccaagat
ccccaaaccaagtaa
DBGET
integrated database retrieval system
