KEGG   Neodiprion lecontei (redheaded pine sawfly): 107219508
Entry
107219508         CDS       T09006                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
nlo  Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107219508
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nlo03041]
    107219508
   03036 Chromosome and associated proteins [BR:nlo03036]
    107219508
Spliceosome [BR:nlo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107219508
 Complex B
    107219508
 Complex C
   U2 SnRNP specific factors
    107219508
Chromosome and associated proteins [BR:nlo03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    107219508
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 107219508
NCBI-ProteinID: XP_015513236
UniProt: A0A6J0BFQ0
LinkDB
Position
3:17199423..17214245
AA seq 1316 aa
MDSIPRTHEDIEAQIREIQSKKEIQNKELTEKEQVGLGKTGFYDQDIYDGSNNKYDGYVT
SIAANDEVEDEDYEPSTFSQSKRPGYNAPAALLNDVAQSEKDYDPFADRRRPTIADREDE
YRQKRRRMIISPERVDPFAEGGKTPDVGSRTYTEIMREQFLKGEESELRKKLVEKAKDGT
LKANGEPKPAPKKRGRWDQTEDTPVAKKPAGTAATPTSWDNADVTPAAIRWDETPGHGKG
GETPGATPGVSTRMWEATPGHATPGAVTPGRETPSHDKAASSRRNRWDETPKTERETPGH
NSGWAETPRTDRVAGDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLTTPHQS
SILTPSGVTPTGPKAMGLATPTPGHLMSMTPEQLQAYRWEREIDERNRPLSDDELDAMFP
PGYKVLQPPAGYIPIRTPARKLTATPTPIAGTPQGFFIQQEDKSAKFVDNQPKGNLPFMK
PEDAQYFDKLLVDVDEESLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGA
GPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYY
ARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFL
KAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITALA
IAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTRE
VMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEAQYIKDEILPHFFKHFWNHRMALDRR
NYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSRL
EEQLIDGILYAFQEQTTEDVVMLNGFGTIVNTLGKRVKAYLPQICGTILWRLNNKSAKVR
QQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTK
MTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKA
HKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTV
LPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTA
CAAIKHMALGVYGFGCEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKILQ
YTLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRILNDPKNQYIRYELDYVL
NT seq 3951 nt   +upstreamnt  +downstreamnt
atggattcaattccacgaacccacgaagacatcgaagctcagatccgtgaaatacaatcg
aaaaaggagatacagaataaagagctgactgaaaaagagcaagtagggttgggaaagact
ggattctatgatcaggacatatacgatggtagcaacaacaaatacgatggttatgtcacc
tctattgcagctaatgacgaggttgaggatgaagattatgaaccaagtacatttagtcaa
agcaagaggccaggctacaatgctccggcagcgctgcttaatgatgttgctcagagtgaa
aaggactatgatccgtttgctgatagacgacgaccgacaattgcggatagagaagatgag
tacaggcaaaagcgacgacgcatgatcatctcaccagaacgtgtcgatccattcgctgaa
ggcggtaagactccagatgtcggctcaaggacttacacagagatcatgcgcgagcagttt
cttaaaggggaagaatctgagttgagaaaaaaattagtggagaaagctaaagatggcact
ttgaaggccaatggagagccgaagcctgcaccgaaaaaacgaggtcgttgggatcagaca
gaggacacgcctgttgcaaaaaaaccggccggtacagcagctactcctacatcctgggat
aatgctgatgttacaccagctgctataagatgggatgaaactcctggccatggcaaaggt
ggtgaaactccaggagccactcctggggttagtacaagaatgtgggaagctactccaggt
catgctacaccaggtgcagtgactccagggcgtgaaacaccatcgcatgacaaagccgca
tccagccgcagaaatcgttgggatgaaaccccgaaaactgaaagagaaactcctggtcat
aatagcggttgggcggaaactccaagaaccgatagagttgccggtgatttaatacaagaa
acacctacaccgtcagccagcaaacgacgcagtcgttgggatgaaacaccctctaatcaa
acacctggatctatgactccacaaacacctgccacaccactgacaacacctcatcaaagt
tctatcttaacacccagcggcgtaacacctacgggacccaaagcaatgggactagcaaca
ccgacacccgggcacttgatgtctatgacgcccgagcaattgcaggcttatcgttgggag
cgtgaaattgacgaacgtaatcgacctctgtcggacgatgaacttgatgccatgtttccc
ccgggttacaaagtgctgcagccacctgcaggatatattccaattcgtactccagcaaga
aagttgaccgcaactccgacgccgatagcaggcacgccgcaaggatttttcatacagcaa
gaagataagagtgccaagttcgttgacaatcaacccaaaggcaaccttccattcatgaaa
ccagaggacgctcaatacttcgacaagcttttagttgatgttgatgaggaatctctcagt
cctgaggaacagaaagaaaggaagataatgaaactccttctcaaaataaagaatggtact
ccgccaatgcgaaaggcagcgctcagacaaattacagacaaagcccgggagtttggagca
ggtcctcttttcaatcaaattctaccgcttctcatgtcacccacattagaggatcaagag
cgacatctacttgttaaagttatcgatcgcattctgtacaaattagacgatttggtcaga
ccgtacgtgcacaaaatccttgttgtaattgaacccttgctgattgatgaagattactat
gcccgagtagagggtcgagaaattatttctaatctggcaaaggccgctggattggctaca
atgatttccacaatgcgacctgacatcgacaacattgatgaatatgtgagaaacacgaca
gctagagcatttgctgtcgttgcctctgcccttggaattccatctttactacctttcttg
aaagctgtgtgtcgcagtaaaaaatcatggcaagctcgccacaccggtattaaaattgtg
cagcaaattgcaattcttatgggatgtgctatcttaccgcatctgaagagcttggtagaa
attattgagcatggtctcgtagatgaacaacaaaaagttcgaaccatcacagcgttggcc
atagctgcattggctgaagcagctactccctacggtattgagagtttcgattccgtcttg
aagcccttgtggaagggtattcgtactcacagaggaaaaggcttggcagcgtttttgaaa
gcaattggttatctgattccgcttatggacgcagaatatgcaaactattatactcgtgaa
gtaatgctgattttgatcagagagtttcaatctcctgacgaggagatgaaaaaaattgtc
ctgaaagttgttaaacaatgttgcggtacagatggtgtcgaagctcagtatataaaggat
gagatacttccacacttcttcaaacacttttggaatcatcgtatggctttagatcgcaga
aattacagacagttggtagataccacagtcgaaatagcaaataaggttggtgcatctgag
ataataaacagagtcgtcgacgatctgaaagatgaaaatgagcagtacagaaaaatggtc
atggaaacaattgaaaaaataatgggcaatttgggagctgccgacgtcgattctcgatta
gaagagcaactaattgatggcattctttatgcattccaagaacagaccactgaggacgtc
gtaatgctcaatggattcggaactatagtcaatacgctcggtaaaagggtaaaagcttac
ttgccacagatttgtggtacgattctttggcgtctcaataataagtccgctaaagtacgt
cagcaagccgcggatctcatttcacgaattgctgttgtaatgaagacatgtcaagaggaa
aaactgatgggtcacttgggtgtcgtgttgtacgaatatctgggggaagagtatcctgaa
gtattgggaagtattttaggtgccttgaaagctattgtgaacgttataggcatgacaaaa
atgacgccgcctatcaaagacctgttgccacgtctcacgccaattctgaaaaataggcac
gaaaaggtacaagaaaattgtatcgatttggtaggaagaatcgcagacaggggacctgag
tatgtttccgcacgagagtggatgcgaatctgtttcgaattactggaattactcaaagcg
cataagaaagcaattagaagagctacggtcaacacctttggatacatcgcgaaggctatt
gggcctcacgacgttttggcaacgttactcaataatctcaaagttcaagaacgacaaaat
cgcgtttgcacaacagtcgccattgctatagttgcggaaacttgtagtcctttcacagtt
ttgccagcattgatgaacgagtacagagttcccgagcttaatgttcaaaacggtgtatta
aaatcgctttcctttttatttgaatatattggagaaatgggcaaagattacatatatgcc
gttagtccattactggaggatgcccttatggacagggacctggtacacagacagactgct
tgtgctgcaatcaagcacatggctttaggagtttacggctttggctgtgaagatgctctg
atccatctcctgaatcacgtttggcctaatgtttttgaaacctctccccatttggttcag
gctttcatggatgctgtagatggtcttcgcgtcgcattgggcccgataaaaattcttcag
tatacattacaagggctatttcacccagctagaaaagttcgagacgtctattggaaaata
tataattctctttatattggcggacaggatgcgcttgtggccgggtatccacggatttta
aatgacccgaagaaccaatatattaggtacgaattagactatgttttataa

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