Neodiprion lecontei (redheaded pine sawfly): 107219850
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Entry
107219850 CDS
T09006
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo04120
Ubiquitin mediated proteolysis
nlo04137
Mitophagy - animal
nlo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107219850
04120 Ubiquitin mediated proteolysis
107219850
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107219850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nlo04131
]
107219850
04121 Ubiquitin system [BR:
nlo04121
]
107219850
03029 Mitochondrial biogenesis [BR:
nlo03029
]
107219850
Enzymes [BR:
nlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
107219850
Membrane trafficking [BR:
nlo04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
107219850
Aggrephagy
Other aggrephagy associated proteins
107219850
Xenophagy
Other xenophagy associated proteins
107219850
Ubiquitin system [BR:
nlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
107219850
Mitochondrial biogenesis [BR:
nlo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
107219850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
107219850
NCBI-ProteinID:
XP_015513677
UniProt:
A0A6J0BHK8
LinkDB
All DBs
Position
1:complement(36826279..36830299)
Genome browser
AA seq
516 aa
AA seq
DB search
MSFLFNLLKGAFLRMLQLIWFGKRKISNSLSIYVKTNTGNTLSIDLDPKWDIRNLKEIVG
PQLGISPEDIKIIFAGKELHNSTIIEECDLGQQSILHAIKLPPGKNRLNRKKDTKNLIEE
SIDEGSEANESGSKPLNETLIDLPLEDSDRHENHSEQEQQQARAHFYVYCSLPCKSVEAG
KLRVRCATCGSGAVTVDRDPQCWPDVQQPRRITVHCENHDCQTLLSSLAQKDEGTPQVRY
AQFYFKCANHVSLGEKDEAVPLYLIKPNLRNVPCLACTDTRDTVLVFPCEAGHVTCLDCF
RDYCVARLRDRQFEFDDNHGYYTLPCPAGCQNSHISEVHHFRLLSPEQYEQYQRFGTEEY
VLRAGGLLCPRPDCGMGIIPPDQTDEERSRSPDEDDCRRIQCIGGCGYVFCRRCLQGFHV
GECDSQQPTTYSSTSAVSCLSGYAIDPLRASEAKWDEASKKTIQISTKPCPKCRTPTERD
GGCMHMVCTRAGCSFQWCWVCQTEWTRDCMGSHWFG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagttttctgttcaatcttctgaagggtgcctttttgagaatgttgcagttgatttgg
ttcggaaaacgaaagatatcgaactcgttgagtatctacgtgaaaactaacacgggaaat
acgctctccattgatttggatccgaaatgggacatcagaaacctaaaagagatcgtcggg
cctcagcttggcatatctcccgaagatatcaagatcatatttgctggtaaagagttgcac
aattccacgataatagaggaatgcgatcttggtcagcaaagtattttgcatgccataaaa
ttgccacccggaaaaaatcgccttaatagaaaaaaagatactaaaaatcttatcgaagaa
tctatagatgaaggatcggaagcaaatgaaagtggaagcaaacctctgaacgaaactttg
atcgacttaccattggaggattcggaccgtcatgaaaatcacagcgagcaggagcagcaa
caagcccgtgcccatttttacgtttactgttcgctgccatgtaaatcagtggaagcagga
aagctgagagtgagatgcgcgacatgtggtagcggggctgtgactgtggatcgagaccct
cagtgttggcctgacgtgcagcagcctcgtagaataactgtacattgtgagaatcacgat
tgtcagacattactgtcttccttagcacagaaggatgaaggtactcctcaagtgagatac
gcgcagttttatttcaagtgcgccaatcacgtgagtcttggagaaaaagatgaggcggta
ccgctttatttgattaaaccaaatctgagaaatgtaccttgtctggcttgcacggataca
agggacacggtactggttttcccttgcgaggctggacatgtaacctgcctggactgcttc
cgggactattgcgtggctcgtctgcgggatcgtcagtttgagtttgacgacaaccacgga
tactataccttgccatgtccggctggttgccaaaattcgcacatatccgaagttcatcac
ttccgtcttctctcacctgagcagtatgagcagtaccaacgatttggaactgaggaatac
gttctaagggcaggaggacttctgtgcccgaggcctgattgcggaatgggaattattcca
cctgatcagactgatgaggagcgtagtcgatccccggatgaggacgactgtcgtagaatt
caatgtattggtggttgtgggtatgttttctgtaggcgatgcttgcaaggtttccacgta
ggtgaatgtgactcacaacagcctacgacgtattcttctacctccgccgtctcctgtctt
tcaggctatgcaattgatcctctgcgagctagcgaggccaagtgggacgaagcgagtaag
aagaccattcaaatatcgacgaaaccatgtccgaaatgtagaacaccgactgaacgagat
ggtggctgtatgcacatggtttgtacaagagctggctgtagtttccagtggtgctgggtt
tgtcagacggaatggacgagagactgtatgggaagtcattggttcggatga
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