Neodiprion lecontei (redheaded pine sawfly): 107219900
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Entry
107219900 CDS
T09006
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nlo03041
]
107219900
03036 Chromosome and associated proteins [BR:
nlo03036
]
107219900
Spliceosome [BR:
nlo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107219900
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
107219900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
HAT_Syf1_CNRKL1_C
Lsm_interact
GlcNAc-1_reg
Smg4_UPF3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
107219900
NCBI-ProteinID:
XP_015513741
UniProt:
A0A6J0BH01
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All DBs
Position
3:complement(27133706..27137779)
Genome browser
AA seq
927 aa
AA seq
DB search
MDEMELEHPGEDEKNDSDFLLDSDGEQGNNLDNSNYNMIEDEADFEKELGMDDNDIDDDS
DSDDEEANEAEIKLLNAKLEESPYDYSSHVALITKLQEMGEKYSDQLKSAREAMSSKYPL
SSELWLSWLRDEIGSVKTSAEREAVTKLCERAVKDYLSVEVWLEYLQFAIGSLGTATDAA
TDIRNLFEQGLTCVGLHVTKGAIIWEAFREFENVLVLMIDASNESERKEQINRVGSLFRR
QLTCPLLDMEKTYEEYEVWRAGDGTQATLDDNVVLTGYERAFAKLNLRLPFEEKLISAQG
EPELLDAFKAYLRFEKQHGDPARVNILYERAIAELSLEGSLWLEYITYMENNIKIQSILE
PLYERATRNVPWYVVIWQKWLRAYERWDKPLTEVQALLEKGLMAGFTSAEEYRSMWLTYL
EYLRRRIDLFPDDKKKLLEIIRETFNRACEYLAKAFGLEGDPGCVVLQYWARTEAIHAND
MEKARTLWADILSQGHSTAAASWLEYIGLERCYGDTKHLRKLYQKALGSVKDWPESIINA
WLDFERDEGTLEQLESCEAKTKEKLEMVVEERKKVQAAALPHEVTSAPAKRAGKRKPEDT
GRWKNLQGSPNKQGKFEATTRPKLKESVLSVENKITPPPGYKPSKDESSTKPKLAPPPGY
KSKEVEKMDEDNSRTVDERITVFVSNLDYNATEDEVRNALEPAGPITLFKMVQDFKGRSK
GFCYVQLSSADSVELALKLDRTPINGRPMFVSRCDPDKTTRGPAFKYSCGLEKNKLFVKG
LPLTMTKEQIEELFGAHGILKEVRLVTYRNGHSKGIAYIDFKSEVDASKALIATDGMTIE
DKVISVAVSQPPERKKGSINDVSLIKSLGGTTTSRTGSNAPKTMLSMIPRSVKPLSKNGD
AGISGNVVGKESLSNADFRNLLLKNKK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaatggagttggaacatcctggcgaggacgagaaaaatgacagcgatttcctt
ttggactctgatggagaacagggtaataatcttgataattccaactacaatatgatagaa
gacgaagcagattttgaaaaagaattaggaatggatgacaatgatattgacgacgacagc
gattctgatgacgaagaggctaacgaagcagaaatcaaactcttgaatgctaagctggaa
gaaagtccctatgattattctagccatgttgctttgataacaaaattgcaagagatgggc
gagaaatattcagatcaactgaaaagtgccagagaagctatgagctccaagtatcctctt
agctctgaactatggctttcctggttgcgagatgaaatcggctcggttaaaaccagcgct
gaacgagaggcggtcacaaagttgtgcgagcgagcagtaaaagactatctttctgtggaa
gtttggttggaatatcttcagttcgctataggaagtttgggtactgctactgacgctgct
acagatattagaaatttgtttgaacagggattaacctgcgttggcttgcacgttaccaaa
ggcgcgatcatatgggaagcatttagagaatttgaaaatgtgttagttttaatgatcgac
gcatctaacgagtcggagcgcaaagaacagataaatcgcgttggctctttattcagacgt
cagttaacatgtcctctacttgacatggagaaaacgtatgaagaatatgaagtgtggcgc
gctggcgacggaacacaagcaaccctagacgacaatgttgttttaactggctatgaacga
gcgttcgcaaaactgaacttgcgtttaccttttgaagaaaaacttatttcagctcaaggt
gagcctgaattattagatgcctttaaagcatatctacgttttgaaaaacaacacggagat
ccagcacgtgtcaatatactttacgaacgagccatagctgagcttagtttggaaggttcg
ctgtggctggaatatattacatacatggaaaataatataaaaatccaatccattttggaa
ccactgtacgaaagagctactagaaatgtaccatggtacgtagtaatttggcaaaaatgg
ttaagagcctatgaaagatgggataaaccattaaccgaagtgcaggcattactggagaaa
ggtttaatggctggtttcacatctgctgaagaatatcgcagtatgtggctgacttacctt
gagtatctacgtcgcaggattgatctattcccagatgacaagaaaaaactcttggaaatt
atcagagaaacattcaatcgcgcttgtgaatatttggcaaaagcattcggtctggagggc
gatcccggatgtgtggtattgcagtactgggccagaaccgaagcaattcatgcaaatgac
atggaaaaggctagaaccttgtgggctgatatactctctcaaggacattccacagctgct
gccagttggttggaatatattggtttggaaaggtgttacggagatacaaagcatcttcgt
aaattgtaccaaaaagcactgggatctgtcaaagattggccagagagcataatcaatgct
tggttagattttgagcgggatgaagggacattggaacagttagaatcctgtgaggcgaaa
acaaaagagaaattagaaatggttgtcgaagagcgaaagaaggtgcaagctgctgctttg
ccacatgaagttacgtctgcaccagccaaacgggcaggcaaaagaaaacctgaagataca
ggtagatggaaaaacttgcaaggatctccgaataagcaaggaaagtttgaagcaactacg
aggccaaagctgaaggaaagcgttctaagtgtggagaataaaataacaccaccacctggc
tataagccatccaaagacgaatccagcaccaagccgaaacttgcaccaccgccaggatat
aagtcaaaagaagttgaaaagatggatgaagataactcgcgcaccgttgatgagagaata
accgtttttgttagcaacttggactacaatgcaacggaagatgaagtaagaaacgcctta
gaacctgcaggaccaattactctttttaaaatggtacaagatttcaaaggtcgcagtaaa
gggttctgttacgtgcagcttagcagtgcagatagtgttgaattggcacttaagttagat
agaacaccaattaacggccgacccatgtttgtttctcgatgcgatcctgataaaacaacc
agaggaccagcattcaagtatagctgtggattggaaaagaacaaactctttgtaaaaggt
cttcctttgacgatgacaaaggagcaaattgaagaactcttcggtgctcatggtatccta
aaggaagttcgccttgtaacgtatcgcaatgggcactctaaaggtattgcttacattgat
tttaaaagcgaagttgacgcgagcaaagcactgatagctactgatggaatgaccatagaa
gacaaagtaatcagtgttgctgtcagtcagcctcctgaacgcaaaaagggatcgatcaat
gacgttagtcttattaaatctcttggtggaacaaccacaagccgaactggttccaatgcg
ccaaaaactatgctttctatgataccacgcagtgtgaaacctctgtctaaaaatggcgat
gcaggaatatcaggtaacgttgttggcaaggaatcactgagtaatgcagattttagaaat
ctgctacttaagaataaaaaataa
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