Neodiprion lecontei (redheaded pine sawfly): 107219921
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Entry
107219921 CDS
T09006
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlo03036
]
107219921
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
107219921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
107219921
NCBI-ProteinID:
XP_015513765
UniProt:
A0A6J0BG19
LinkDB
All DBs
Position
3:22126779..22143729
Genome browser
AA seq
2214 aa
AA seq
DB search
MPEQILAKMNGVIPSVPITTLAGIASLTDLLPEMPLPTPLPQTLTNKSLLFHPRVAQEAQ
ILLSARDENLVPQLILSLSQTSSDHIELKDHYANTEQLVDPQQNTPELLKAILQINPHVF
KGPQYNSPRNWTTQNTSLMHPNQSPASYGQFSPSYSSPSGSRHTPQGSPAHPAAARIVLP
PPGAVAQPQHPRMSIAPQNHAELSQMSPFAVPSPSPRATVITEQTRASTTPQHMQEDVNC
VNPISQMNPQQNIYSPAHLSSPNSAITSLGNITPQHHVGGLTPQHNIHHTSPMHAGIPTH
HHSMNVQQSIYDPVLNQQLPHPLESHQLDNVNNSVQDNQQFILDPVTGFPDVQLPISHDL
DERRNPAQMPIRDVIHNLQQIPVHPNPNLLVNEANETYGSPHRMTNPSSIQNNNLAKSEV
SQATLPLAVTPVEKMKEPIVMLKRLSLADQALMQKSLSAFAEKSPNLAAKMGIMGGNNEV
KSDSESEEEIGRNNKHFKARARERQVQKEKERAERKKGEDKTQRRRRRIVDDDDDYREDE
EPNSPTKPKIRKVERKLVPVLHKLSVEELMDTNTYQRFNRTIDAIFENTEDAAATADLDD
DGDVAPEMLISKYQLHDLCSEAAKLKGLGAMESIPPDRLVRLLNILEKNIRDGARVSPLA
DPDDDIDESRLWMELAMERVQRAVDASLTALYIMTSQNMSKHVYLEDVIDRIVLFMKFQL
QNTIYPSFDPVYRIDSKNKTENFNASGRKKRAHTKEVREKSILGVYNKMHVLVGLLAELL
SIQVLTDTSVLHASTLGVAPFFVESVSELQLSALKLVTVIFTKYEKHRRLLLDDILASIA
RLPSSKRSLRTYRLNSEDYIQMLTALVLQLIQCVVVLPESLMPRDKQARDDDEKSEEKEK
KSHQVDIDVLILNKYETATRTAGNFLNVFLNKCGSKGEEIDYRPLFENFVQDLLATVNKP
EWPAAELLLSLLGNLLVSHFSNKGSDMSLRIASIEYLGVVAARLRRDAVNSHCKLSTIDQ
IVKDIKTEQQKDTDYEVTKDKDIVGISEDEERTIFLQRVLIDYLAVNGTNDAALGYARHF
YLAQWYRDTVVEKSRVGQTKNTPTKKMQKKKSIKKNRHLSSDEESESDENECDADENDNN
EQKNSESYRLIELKKKLIINKIRPYSHSTAKSDILQTYIDYKSAELISQYLASKRPFSQS
FDRYLKQILHVLTESSIAIRTKAMKCLTMIVEADSSVLARVDMQLGVKHSFFDLSTSVRE
AAVDLVGKFVLSRPELIDKYYDMLSTRILDTGVSVRKRVIKILKDICMECPNFPKIPEIC
VKMIRRVNDEEGIRKLVMEVFQNMWFTPVKERPVVDSEALLRKVMNITDVVTASKDMGLE
WFEQLLVSLFKPKEDKEDSTKTMTEPPKALLTACKQIVDCLIENVLRLEETGLDDAEKVE
KKGSSQRLVACLTTLYLFAKIRPQLLVNHAITLQPYLSLKCQTQGDYQIISSVAHTLELV
VPLMEHPSETFLAQLEEDSVKLILLHDKSVVASCLSCLGSIVNNVTRNFKLIRDCFKKYY
GHLTDYKSLYEKNRTNPILQKNRPFFRRALFTVGLLLRHFNFTDKEVTEGLPENIKDQVF
ETLSYFVHQDNDDIRFFTLSAIGSLCIRHYEFMMTPELKELYHHLLTSENAPINMRSQVL
NNIEVYLQEEEKRMIKQDQEWAKLSKQENLKEMGDVSSGMASTVIQLYLKEILESFLHIN
VSVRHAALKVIQLILAQGLVHPVQIVPYLICMSTDCEKMVSHSADKQLQDIEKKYPGFIH
MKSQFGIRLSYRLQKILQNDDTVRGMRIKEGEFPSALNGFLYTILRNTKQQRRAIVLSFL
KQFDESAKTSLSQMLYLADNLSYFTYQVQDEPLFIIHNIDIIISMSGTNLLQSFKEALLP
KEIHPQQSQVQQQQQQQEHPSLMKFGPDGEPLAIPVLPNIEDEEDDEEDEETIMARLPED
TTLLREYITASQGFLLLLTLRQHLKDLYGFTDAKIGQYSPSESAKVYEKAVSRKNNLHFR
PKATLQKLKDGTNNDELDETGKKKLIKEYLDFKQLMLKFDPEEPDEEGGNPEALQKANQI
DPTAASGRLPTVADIHATPTHSMNRQLNENQINMSNPAVQVNSVNSIPAAPQAAATTPRV
PKLTIHPHSENKDHRKQHRTHKTEKVKKHKKKKRRRISDSSESAEDYSDPDFLV
NT seq
6645 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacaaatcctagccaaaatgaatggggttataccgagcgtaccgataactacc
cttgcgggcatagcaagtctgactgacttgttaccagagatgcctttgccaacgccgctt
ccgcagactctgacaaataaatcgcttttgtttcatccacgtgtggcgcaggaggcgcag
atacttcttagtgcaagggatgagaacttagtgcctcagttaattctctctctctcgcag
acatcctcagaccacattgagctcaaggaccactacgccaacaccgagcagctcgtagat
ccccagcaaaatacaccggaattgctgaaagcgatacttcagataaatccccacgtgttt
aaagggccacagtacaactctccgcggaactggacaacccaaaatacttcgctgatgcac
cccaatcagtcaccagccagttacggacagttttcaccatcttattcgagcccgtcagga
tcacgccacactcctcagggcagtcctgctcatccggctgctgcgcgcatcgttttacca
ccaccaggagcggtggcccagccacagcatcctcggatgagtatcgcgcctcagaaccac
gccgaactttcgcaaatgtcaccatttgctgttccttcgccttctccaagagccacagtc
atcacagaacaaaccagagcatcgacgacgccgcaacatatgcaggaagatgtgaactgt
gtgaatccaatttcccagatgaacccgcaacaaaatatttactccccggctcatctcagc
tcacctaatagcgcaattacgtctctgggcaacatcacacctcagcatcacgtcggcggt
ctcacgcctcagcacaatatacaccatacttcaccaatgcacgctggaattcctacacat
catcatagtatgaacgtacaacaaagtatttacgatcctgtactgaatcagcagctacct
caccccttagaatcccaccaacttgataatgtcaataacagcgttcaggataatcaacag
tttattctggatccggtcactggctttccagacgttcaactacctatatcgcatgatttg
gacgagaggcggaatcctgcacaaatgccgatccgggatgtcattcataatttgcagcaa
attccggttcaccctaatcctaacctgttagtaaacgaagcaaacgaaacttacggctca
ccacatagaatgacgaatccttcgagcattcaaaataataatctcgccaagagcgaagtg
agccaagcaacgctgccactggcagttacgccagtggaaaaaatgaaagagcctattgtt
atgttgaaaagattgtcactggccgatcaagctctgatgcaaaagagcctcagcgctttt
gcagagaaatctccgaaccttgcagcaaaaatgggcattatgggaggcaacaatgaggtg
aagagtgattcggagagcgaagaggaaataggcaggaataacaagcacttcaaggcacga
gccagggagagacaggtccagaaagaaaaagaaagagcagagcgaaagaaaggagaggac
aagacccaaagaagacgcaggaggatagtagatgatgatgacgattatagagaggacgaa
gaaccaaattcgccgacgaaacctaagatcaggaaagtagaaagaaaactagttccagta
ctgcataaactcagcgttgaggagcttatggacactaacacgtatcagagattcaacaga
actatagacgcgatatttgaaaacactgaagacgctgcagcaacagctgatcttgacgat
gacggtgacgtagctcctgaaatgctcatatctaaatatcagcttcacgacttatgcagc
gaagctgccaagctcaaaggtcttggggctatggaatctatcccacctgaccgcttggtc
agacttctcaacatattggagaagaacatacgtgacggcgctagagtctcgccacttgct
gatccagatgatgacatagatgaaagccgcctctggatggaactcgccatggagagggtg
cagcgtgcagttgatgcatcacttaccgctctctacatcatgacgtcacaaaatatgtct
aagcatgtttaccttgaggacgttatagacagaattgtgctgtttatgaaatttcagcta
cagaacacgatttacccttcgtttgaccctgtttacagaatagactctaaaaacaagaca
gaaaattttaatgccagtggtagaaaaaaacgagcccatactaaagaagtaagggagaaa
agtatccttggagtttataataaaatgcacgtgcttgttggtctgctcgccgaactcctc
agtatccaggtcttgaccgacacaagtgtgctacatgcctctaccctgggtgttgctcct
ttctttgtcgaatctgtgagtgagctgcagctgagtgcgctgaaacttgtaacagttatt
tttacaaagtatgagaaacacaggcgattgctactcgacgatattttggcctcaatagca
cggctgccaagcagtaaaaggagtcttaggacttaccgactgaactctgaagattatata
caaatgcttactgctttggttcttcagctaattcaatgtgtcgtagttctaccggagagc
ttaatgccacgtgataaacaggcgagggatgacgatgagaagagtgaagaaaaagagaag
aaatcccaccaggttgacatcgacgttcttatactcaacaagtacgaaactgcgacaaga
acagctggaaattttttgaatgttttcctaaacaaatgtggaagcaaaggcgaggaaatc
gactacagaccgttgtttgaaaactttgtacaggatctgttggcgactgttaacaaacct
gaatggcctgccgctgaactgctcctcagtcttctggggaatttgcttgtcagccatttt
tccaacaaaggatctgacatgtcgctcaggatagcgtccattgaatatcttggtgttgtg
gctgccagactgcgcagggatgcagtaaactcgcactgtaaactgtcgacgatcgatcag
atagtaaaagacataaagactgaacagcagaaagacactgactatgaggtgacaaaagat
aaggacattgttgggatcagtgaggatgaagaaagaacgatatttctgcagagagtgcta
atcgattatctcgcagtaaatggaacgaacgacgctgctctgggatatgcgaggcacttt
tacctagcacaatggtacagagataccgtagttgaaaaatctcgcgttggccagacaaaa
aatacgccaacaaaaaagatgcagaagaaaaagtcaataaagaaaaatagacatctcagc
agcgatgaggaaagtgaatcagatgagaatgagtgtgacgcagatgagaatgacaacaat
gaacagaaaaactcagagtcatatcggctcattgaactaaaaaagaaattaattataaat
aagataagaccttacagtcattccaccgctaaaagtgatatactacaaacttacatcgac
tataagtctgcggaattgatatcacagtaccttgcatcgaagcggcccttctcacaaagc
ttcgatcgctatctcaagcagatacttcacgttctgactgaatcttcaatcgctattcgc
accaaggcaatgaaatgccttacaatgattgtcgaggctgattcgagtgtattggccaga
gttgacatgcagcttggtgtaaaacactcgtttttcgacctgtccacgtctgttcgcgaa
gcagctgtcgatctcgttggtaaatttgtcctaagtaggccagagctgattgacaaatac
tacgatatgctctccacgcgaattcttgacactggggtcagcgtgcgaaagcgtgtcatc
aagatactcaaggatatatgtatggagtgcccaaatttccccaaaataccggaaatatgc
gtcaagatgataagaagggttaacgacgaagagggaataagaaaactggtcatggaagtg
tttcagaacatgtggttcactcctgtcaaggaacgacctgttgtagattccgaggcactg
cttagaaaggtgatgaacatcacagatgtcgttactgctagcaaggacatgggacttgag
tggttcgagcagctcctggtgagcttgttcaagcctaaagaggacaaagaggacagcaca
aagacaatgactgagccgcctaaggcgttgctcacagcctgcaagcagatcgttgattgt
cttatcgagaatgtattaagacttgaagaaacgggccttgacgatgctgagaaagttgag
aagaagggctcatcgcaaaggctagtagcctgtttaactacgctatatttgtttgcaaaa
ataagaccgcagctcctcgtcaaccatgcgataacgttacagccctatctcagtctaaaa
tgccagacccagggtgactatcagataataagcagtgtcgctcacacgttagagcttgtc
gttccgctgatggaacaccccagcgaaacctttctggctcagctcgaagaggattctgtc
aaactgattctactccatgataagtctgtcgttgcaagttgcctttcctgtctgggatct
atagtaaacaatgtaacaaggaatttcaagctgatacgcgattgctttaagaaatattat
ggacatttgaccgactacaagtcgttgtatgagaaaaatcgtaccaatccgattctgcag
aagaatagaccgtttttcagacgcgctttgttcactgtcggacttttgctcaggcatttc
aacttcactgataaggaagtaaccgagggcctaccagagaatataaaggaccaagttttt
gagacgctgagctactttgtgcatcaggataacgacgacatacgatttttcacactttcg
gctattggctcattgtgcatcaggcactacgaattcatgatgacacccgagctcaaagaa
ctttatcaccatttactcacttccgaaaatgcgcccatcaacatgcggtcacaggtcctc
aacaacattgaagtatatctgcaagaggaagaaaagcgaatgataaaacaggatcaggaa
tgggctaagctgtccaagcaagagaacctcaaggaaatgggcgacgtttcatcgggtatg
gctagtacggtaatccagttgtacctaaaagagatactggagtcgttccttcatataaat
gtatctgtgaggcacgctgctctcaaggtaatccagctgatattggctcagggtctcgta
catcctgtgcaaatagttccgtacctgatttgcatgagtacagattgtgaaaagatggtg
agtcatagtgccgacaaacaactgcaagacatcgagaagaaatatccaggcttcatacac
atgaagtcacagtttggaatcaggctgagctaccggcttcagaagatactgcaaaacgac
gataccgttagagggatgagaataaaggagggggaatttccatctgctctcaacggtttt
ctgtacaccatacttaggaataccaagcagcaacggagggcgattgttctctctttcctt
aaacagtttgacgaaagtgctaagacaagtttgtcacaaatgctttatctggcagacaat
ttgtcttacttcacttaccaggttcaggatgagccattgtttatcatccataatatcgac
atcatcatttcaatgtctggcacaaatctcttacagtctttcaaggaggccctgttgcct
aaggagattcatccccagcaatcgcaggtgcaacaacagcagcaacagcaggagcatccc
tcgcttatgaaatttgggcctgatggagaaccactggcaattccagttttaccgaatatt
gaggatgaagaggatgacgaagaagacgaggaaacgataatggcaaggttaccggaagac
acgacattactcagggagtatataacggctagtcaaggttttttattgctgcttactctg
agacagcatctcaaagatctttacggattcacggatgctaaaattggacagtattcacct
tcagaatctgcgaaggtctacgagaaggctgttagtagaaaaaataatctccacttccgg
cctaaagcaacgctacagaaactgaaagatggtacaaataatgatgagctggacgaaact
ggtaaaaagaagttgataaaagaatacctcgacttcaagcaattgatgctcaaatttgat
cctgaggaacccgatgaggaggggggaaaccctgaagctttacaaaaagccaatcaaatt
gatccaactgctgctagcggtagattaccaactgttgcagatattcacgccacacccact
cactctatgaacagacagctaaatgagaatcagattaacatgagtaaccctgcggttcaa
gttaactctgttaattcaatccccgcagctccacaggctgcggcaaccaccccacgtgta
cctaaactaaccatacacccccacagcgaaaacaaggaccacagaaaacagcatcgtacc
cataaaacggaaaaggttaaaaagcacaagaagaaaaaaaggagaagaatttcagacagt
agcgaaagtgctgaggactatagtgaccctgattttctagtgtga
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integrated database retrieval system
